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kraken2 2.1.3-1
  • links: PTS, VCS
  • area: main
  • in suites: forky, sid, trixie
  • size: 5,124 kB
  • sloc: cpp: 4,557; python: 2,014; perl: 1,281; sh: 515; makefile: 69

Folder: scripts

d .. (parent)
- - rwxr-xr-x 959 16S_gg_installation.sh
- - rwxr-xr-x 956 16S_rdp_installation.sh
- - rwxr-xr-x 1,193 16S_silva_installation.sh
- - rwxr-xr-x 947 add_to_library.sh
- - rwxr-xr-x 2,438 build_gg_taxonomy.pl
- - rwxr-xr-x 4,654 build_kraken2_db.sh
- - rwxr-xr-x 2,191 build_rdp_taxonomy.pl
- - rwxr-xr-x 1,269 build_silva_taxonomy.pl
- - rwxr-xr-x 583 clean_db.sh
- - rwxr-xr-x 1,277 cp_into_tempfile.pl
- - rwxr-xr-x 4,497 download_genomic_library.sh
- - rwxr-xr-x 1,760 download_taxonomy.sh
- - rwxr-xr-x 77,187 k2
- - rwxr-xr-x 8,161 kraken2
- - rwxr-xr-x 10,955 kraken2-build
- - rwxr-xr-x 2,723 kraken2-inspect
- - rw-r--r-- 2,803 kraken2lib.pm
- - rwxr-xr-x 1,780 lookup_accession_numbers.pl
- - rwxr-xr-x 3,883 make_seqid2taxid_map.pl
- - rwxr-xr-x 1,209 mask_low_complexity.sh
- - rwxr-xr-x 6,410 rsync_from_ncbi.pl
- - rwxr-xr-x 1,659 scan_fasta_file.pl
- - rwxr-xr-x 1,596 standard_installation.sh