File: chrom2_lamarc.html

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lamarc 2.1.10.1%2Bdfsg-3
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<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 3.2 Final//EN">
<HTML>
<BODY>
<pre>
&lt?xml version="1.0" ?&gt
&ltlamarc&gt
    &ltdata&gt
        &ltregion name="chrom2"&gt
            &ltspacing&gt
                &ltblock name="chrom2-segment1"&gt
                    &ltmap-position&gt 1000 &lt/map-position&gt
                    &ltlength&gt 500 &lt/length&gt
                    &ltoffset&gt -4 &lt/offset&gt
                    &ltlocations&gt 2 88 125 173 443 &lt/locations&gt
                &lt/block&gt
                &ltblock name="chrom2-segment2"&gt
                    &ltmap-position&gt 5000 &lt/map-position&gt
                    &ltlength&gt 250 &lt/length&gt
                    &ltoffset&gt -4 &lt/offset&gt
                    &ltlocations&gt 13 19 35 77 102 112 204 &lt/locations&gt
                &lt/block&gt
            &lt/spacing&gt
            &ltpopulation name="North"&gt
                &ltindividual name="n_ind0_a"&gt
                    &ltsample name="n_ind0_a_0"&gt
                        &ltdatablock type="SNP"&gt Gaaaa &lt/datablock&gt
                        &ltdatablock type="SNP"&gt Caaaaaa &lt/datablock&gt
                    &lt/sample&gt
                &lt/individual&gt
                &ltindividual name="n_ind0_b"&gt
                    &ltsample name="n_ind0_b_0"&gt
                        &ltdatablock type="SNP"&gt aGaaa &lt/datablock&gt
                        &ltdatablock type="SNP"&gt aCaaaaa &lt/datablock&gt
                    &lt/sample&gt
                &lt/individual&gt
                &ltindividual name="n_ind1_a"&gt
                    &ltsample name="n_ind1_a_0"&gt
                        &ltdatablock type="SNP"&gt aaGaa &lt/datablock&gt
                        &ltdatablock type="SNP"&gt aaCaaaa &lt/datablock&gt
                    &lt/sample&gt
                &lt/individual&gt
                &ltindividual name="n_ind1_b"&gt
                    &ltsample name="n_ind1_b_0"&gt
                        &ltdatablock type="SNP"&gt aaaGa &lt/datablock&gt
                        &ltdatablock type="SNP"&gt aaaCaaa &lt/datablock&gt
                    &lt/sample&gt
                &lt/individual&gt
                &ltindividual name="n_ind2_a"&gt
                    &ltsample name="n_ind2_a_0"&gt
                        &ltdatablock type="SNP"&gt aaaaG &lt/datablock&gt
                        &ltdatablock type="SNP"&gt aaaaCaa &lt/datablock&gt
                    &lt/sample&gt
                &lt/individual&gt
                &ltindividual name="n_ind2_b"&gt
                    &ltsample name="n_ind2_b_0"&gt
                        &ltdatablock type="SNP"&gt Taaaa &lt/datablock&gt
                        &ltdatablock type="SNP"&gt aaaaaCa &lt/datablock&gt
                    &lt/sample&gt
                &lt/individual&gt
            &lt/population&gt
            &ltpopulation name="South"&gt
                &ltindividual name="s_ind0_a"&gt
                    &ltsample name="s_ind0_a_0"&gt
                        &ltdatablock type="SNP"&gt Taaaa &lt/datablock&gt
                        &ltdatablock type="SNP"&gt Gaaaaaa &lt/datablock&gt
                    &lt/sample&gt
                &lt/individual&gt
                &ltindividual name="s_ind0_b"&gt
                    &ltsample name="s_ind0_b_0"&gt
                        &ltdatablock type="SNP"&gt aTaaa &lt/datablock&gt
                        &ltdatablock type="SNP"&gt aGaaaaa &lt/datablock&gt
                    &lt/sample&gt
                &lt/individual&gt
                &ltindividual name="s_ind1_a"&gt
                    &ltsample name="s_ind1_a_0"&gt
                        &ltdatablock type="SNP"&gt aaTaa &lt/datablock&gt
                        &ltdatablock type="SNP"&gt aaGaaaa &lt/datablock&gt
                    &lt/sample&gt
                &lt/individual&gt
                &ltindividual name="s_ind1_b"&gt
                    &ltsample name="s_ind1_b_0"&gt
                        &ltdatablock type="SNP"&gt aaaTa &lt/datablock&gt
                        &ltdatablock type="SNP"&gt aaaGaaa &lt/datablock&gt
                    &lt/sample&gt
                &lt/individual&gt
            &lt/population&gt
        &lt/region&gt
    &lt/data&gt
&lt/lamarc&gt
</pre>
</BODY>
</HTML>