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History of Lamarc -- the program
--------------------------------
2013
Nov 14 Lamarc-2.1.9: This is a bug fix release
* FIXED MULTIPLE BUGS IN DIVERGENCE. Results
from release 2.1.8 with divergence turned on
should be re-run.
* DIVERGENCE PRIORS can be set from menu
* INVARIANT LOCI no longer cause crashes as in 2.1.8
2012
May 29 Lamarc-2.1.8: This is a bug fix and new feature release
* FIXED BUG in MIGRATION
* FIXED BUG in negative GROWTH cases
* FASTER convergence in LIKELIHOOD cases
* NEW FEATURE -- panels
* NEW FEATURE -- divergence
2011
January 21 Lamarc-2.1.6: This is a bug fix release, with the
following changes:
* FIXED data likelihood bug that appears only
in cases with RECOMBINATION turned on. Results
obtained from releases 2.1.2 through 2.1.5
with the recombination force turned on should
be re-run.
* FIXED calculation of invariant data term for
SNP data modeled with a per-base error rate
* UPDATED random number generator to use the
Boost library, and added guards against
returning values of exactly 0 or 1 for
double values
2009
December 21 Lamarc-2.1.5: This release includes a beta test version
of "data uncertainty", csv output formats for
curvefile and profile data (to make them easier
to read with R or Excel), and supplemental XML output
file "report.xml" to make it easier to automate
reading lamarc output.
2009
July 17 Lamarc-2.1.4: This release brings the code base up to
compilability with g++ 4.3.3. Additionally, minor user
experience bugs are fixed. This was used at the
Woods Hole Molecular Evolution Conference but
not distributed via the Lamarc web site
2008
July 14 Lamarc-2.1.3: This release fixes a bug introduced into
the code used to guess haplotype resolution. Analyses
using this feature in LAMARC versions 2.1.2 and 2.1.2b
should be re-run. Additional improvements include:
* Tracer output now renders step counts as integers
instead of reals.
* Mapping output now writable to its own file.
* Upgraded default wxWidgets installation to 2.8.8.
2007
October 9 Lamarc-2.1.2b: Minor fixes to 2.1.2 affecting user
experience only
2007
October 4 Lamarc-2.1.2: Recombination now does not attempt to
insert recombination events that have no effect on
present-day data.
2007
July Lamarc-2.1.1: Bug fixes
2007
May Lamarc-2.1: full support for trait mapping, multi-locus data.
New GUI for lam_conv; batch modes for lamarc and lam_conv.
2006
July 24 Lamarc-2.0.3_Woods_Hole_Beta: Bug fixes, preliminary
support for trait mapping, multi-locus data.
2005
August 26 Lamarc-2.0.2: bug-fix replication, Bayesian multi-region,
and multi-region effective popsize, version numbers in xml,
Bayesian summary file reading
2005
June 1 Lamarc-2.0: Bayes, constraints, models, replicates, max.
2004
June 25 Lamarc-1.2.2: bug-fix of growth, improved maximization
2004
June 1 Lamarc-1.2.1: added growth, adaptive heating
2002
June 25 Lamarc-1.1: added microsatellites, SNPs, genotypic data
2001
December 10 Lamarc-1.0: first (alpha) version of lamarc.
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