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a score=3061 mismap=1e-10 sense=6.5 don=GC
s chrX 23075589 648 + 156040895 GCCGGGGGA-GTCCGAGAGGAAGCGGAGGCGCGAGCTGGAGGCGGCGGCTCCCGTCGGCCTCCGGCAGGACTGAGCG-----CTGGGAAGCCGGAAGGCGGGCGCGCACGGCGGAGA-GGCGGGCGGGAGGCCGGAGCATATTAATGAAAAGTGCCATAAACTGAAAAACCAAACATGAGGGTAGCAGGTGCTGCAAAGTTGGTGGTAGCTGTGGCAGTGTTTTTACTGACATTTTATGTTATTTCTCAAGTATTTGAAATAAAAATGGATGCAAGTTTAGGAAATCTATTTGCAAGATCAGCATTGGACACAGCTGCACGTTCTACAAAGCCTCCCAGATATAAGTGTGGGATCTCAAAAGCTTGCCCTGAGAAGCATTTTGC-TTTTAAAATGGCAAGTGGAGCAGCCAACGTGGTGGGACCCAAAATCTGCCTGGAAGATAATGTTTTAATGAGTGGTGTTAAGAATAATGTTGGAAGAGGGATCAATGTTGCCTTGGCAAATGGAAAAACAGGAGAAGTATTAGACACTAAATATTTTGACATGTGGGGAGGAGATGTGGCACCATTTATTGAGTTTCTGAAGGCCATACAAGATGGAACAATAGTTTTAATGGGAACATACGATGATGGAGCAACCAAACTCAATGATGAG
s 90089 48 622 + 2478 GCCGGAGGAAGTCCGAGAGGAAGCGGAGGCGCGAGCTAGAG-CAGCGGCTCCCGTCGGCCTCCGGCAG-------CGTTAAACTAGGAGGCCGGAAGGCAGGCGCGCACGGCGGAGAAGGCGGGCGG-AGGC--GAACATATTAATGAAAAGTGCCATAAACTGAAAAACCAAACAT-AGGGTAG---GTGCTGCAAAGTTGGTGGTAGCTGTGGCAGTGTTTTTACTGACATTTTATGTTATT-CTCAAGTATT-GAAATAAAA-TGGATGCAAGTTT---AAATCTATTTGCAAGATCAGCATTGGACACAGCTGCACGTTCTACAAAGCCTCCCAGATATAAGTGTGGGATCTCAAAAGCTTGCCCTGA--AGCATTTTGCTTTTTAAAATGGCAAGTGGAGCAGCCAACGTGGTGGGACCC-AAATCTGCCTGGAAGATAATGTTTTAATGAGTGGTGTTAAGAATAATGTT-GAAGA-GGATCAATGTTGCCTTGGCAAATGGAAAAACAGGAGAAGTATTAGACACTAAATATTTTGACATGTGG---GGAGATGTGGCACCATTTATTGAGTTTCTGAAGGCCATACAAGATGGAACAATAGTTTTAATGGG---GT--GATGATGGAGCAACCAAACTCAATGATGAG
p &(((($$$""4>DHMOPPMNNNRRNNRNNQPQQRQPJ452##779;<>AQLJLRRRNNNNRNKA=4&#++)+,%#)).,-+)*,-0687<JMNNNNMJH<>AOOOPPRRNNRI=:4$#25EEED?%""7?>++**--DJQQNNNNRRJHHJRRRNNRRLJLRRRIGGGINNLJLQJ<22=?86%"6%"4KORRRRLJLRNNNNRNNRRRRRQQNNRRQQQIGGGIRRRRRRRJHHJRQRLG@%""9DHNNQH@%""AIIGB'$#!!CMNRRRRNNQB?;GL=~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~20.?PQJHHHI:!!#$':;=@RNNRNNRRNNRRRRRNNNNRRRNNRLJLRB?>""$'BOPRNNRNNNNRQRNNRRJHHJNNRRRQRNNQQNNNNRNNRNNOM?<##25@7""%7NRNNRRNNRNNNNNNRLJLRNNIGGGIRRNNQQNNRRRNNRRQQQRRLJLQQJHHJRRRRNLI1.!#%"#%'3KNQNNRRNNRLJLRNNRRRLJLRRRNNNNNNRRRRNNRRRNNNNRNNRRRJHHJNNK41/$/5"&*'09ACEFHMRRRNNNNLJLRRRNNQPNF=6)
p ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~9999999~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~III~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~m~~~~~~~~~~~~~ddd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~U~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ddd~~zw\\[[[[[[[ZZZZZZZZZZYXXXXXXXXXTTTTTTTTTTSSSSSSSSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRRRRQL.............
a score=493 mismap=0.014 sense=6.5 acc=GC don=GT
s chr7 121351142 114 + 159345973 CTGTTCAAAAGGGCTTTTTGTCTTAATGCCCTTCCCACCACAGAAGACCCAGTTGTCTCTAAAACCAAGATTAGTAATAGATGTGCTCCCCAAATCAGCAATGAGCCGCCGTGC
s 90089 1702 101 - 2478 CTGTTCAAA-GGGCTTTTTA--TTAATGCCCTTCCCACCACAGAAGACCCAGTTGTCTCTAAA-CC-AGATTAGTAATAGATGTGCT-CCCAAATCAGCAATGAGCC-------
p &,1578&$""57:J9643*'*'~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~1..#$7ENNRRRNNRRRRRQQQG8""$'>?BRRRRRNNOIC,)$''()%+$
p 3333333310000,,,,,,,,,,,,,,,,,))))))))((('''''''&&&&&&&&%%%%%%%%%$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$
a score=9115 mismap=8.94e-10 sense=6.5 acc=AG
s chr7 121348853 1697 + 159345973 ACAAAGCAAAACCAAGAGTATTTATTTTCATTATTTTAAAAAACTGCAACATTTATTTCACAATCCCTGGAACTGTAAAATAACTATTCTTTTAATTTACAGAATTGAGGGAAGTATTTTAAATGTCAAAATACACATGCTGAATGTGATTTAGCATATAAGCACCAAAAATCCCAAAAGTATACAAA-GATTGTTTAAACATATAAGGTGCATTTATTCatgaattaattaCATTCAGTTTGAAGGAAGAAACAGTACTCCAAAGTTCATCAATATTTAAGAAATTATCCGAATAGCTTCCAACTTGGTTTACAGCTAAATAACAGATACTGCTTTTAGGTTTTTTTATACAATGCATCTAAACTTTAGGTTCGAAATTTAAGTGCTGCCTTACACTGTGAATGGCAGTTTGATCACTAAATTTATGTTCCAGTTTGAGATACTTCATACACAACATATATTTAATGCCCTGAAAACTTCTGCTTAAAAACTGAGTTATTTAGTGAACATCTGAAGGTAACAAAAAAAGATAGATCTTCTATATTTTTATGTAGAATTGGGTATAAAGTCATTTGGGGTCAAACACAATTATTTTTTAAATGTTATCAGTCCGCCCAGTAATAAGAACTTTTGTAAATATGCCACTATAGCTTCGGGCAATAATTGCTATTATGAAGTTAGATAAACACAGGATTAATTTCTTGGTTTACAAATCAAAATTATTGTGATATTAAAGCATGCCTCCTTCCAAACCACTTGGTCAATGCTGATAACAATTAAGAAAAACGTATGCTAGTATTGCTCTAAATATACTGACTTAGCTGTCCTGAATGACCTAATTAGGTTGGGGAGGGGACTTGGCCTGGTTCTCCAGTTCTGTGAAGCTGCCACCTCCAGCCTCACTCTAAATAGCTTATACAAAATCAAGTTATTCCCATAGCTAACACAAATCCAGCAAGCTGTGGTCCTAAATGCCATCTACATTTAtatatttacttttttactgTGTACATTAAGAATTTTGTTGTGCTTTTCACATATCCGATGTATGTTTTCATATTAAACATTCCTCAGTTTCTTGGGAAGGAAAGAAAAAGATCATGAAAAGAGGTACATCAGGAGAGTCGGACTGTAAAGTAACATTACACACACAACTAGCCAAATCTCTTTTTAATTTAAAAGATAATGTCATCACAACGCAACATATAgaaacataaaagaaaataaaGTATCCACCCTAAAATCCCTATTATTCCATGATATTTTCATAGCAACTAGTATatatatcaatatatttttCACAAACCATTCAGTTACACATTGTGTATGCTTTTAGAATTTAAAATATGTATTACCATAGCAGTCTAAACATTGTACTTTTAGGGAAATGTGCGGAGACATGGTTCAGTGATTTGATCATTGTGATGATTATTTACAATGCTATCTATTTACGTTAGCAATAAATAATCCTGATATCAAAAGAGACAATACTCATGCACACACCAAGATGGCTGCATGCTCTTAAAATATTTACACATAGCTCTGCCATTTatagctctcccattaagaGTGAAAGTGCGCTTTCTTCAATTCTC-TCCACATTTCCATTAGTCTTGCTTCTGGGGGATGCATCCTTCCATTTCTACAACTTCAGGCCATCCTTCATATTTGTTTGTATCCTTATTGTTCTTTATGTG
s 90089 47 1655 - 2478 ACAAAGCAAAACCAAGAGTATTTATTTTCATTATTTTAAAAAGCC-CAACATTTATTTCA--ATCC-TGGAACTGTAAAATAACTATTCTTTTAATTTACAGAATTGAGG-AAGTATTTTAA-TGTCAAAATACACATGCTGAATGTGATTTAGCATATAAGCACCAAAAATCCCAAAAGTATACAAAAGATTGTTTAAACATATAAGGTGCATTTATTCATGAAT-AATTACATTCAGTTTGAAGGAAGAAACAGTACTCCAAAGTTCATCAATATTTAAGAAATTATCCGAATAGCTTCCAACTTGGTTTACAGCTAAATAACAGATACTGCTTTTAGG--TTTTTATACAATGCATCTAAACTTTAGGTTCGAAATTTAAGTGCTGCCTTACACTGTGAATGGCAGTTTGATCACTAAATTTATGTTCCAGTTTGAGATACTTCATACACAACATATATTTAATGCCCTGAAAACTTCTGCTTAAAAACTGAGTTATTTAGTGAACATCTGAAGGTAACAAAAA--GATAGATCTTCTATA-TTTTATGTAGAATTGGGTATAAAGTCATTTGGGGTCAAACACAATTA-TTTTTAAATGTTATCAGTCCGCCCAGTAATAAGAACTTTTGTAAATATGCCACTATAGCTTCGGGCAATAATTGC---TATGAAGTTAGATAAACACAGGATTAATTTCTTGGTTTACAAATCAAAATTATTGTGATATTAAAGCATGCCTCCTTCCAAACCACTTGGTCAATGCTGATAACAATTAAGAAAAACGTA---TAGTATTGCTCTAAATATACTGACTTAGCTGTCCTGAATGACCTAATTAGGTT--GGA-GGGACTTGGCCTGGTTCTCCAGTTC--TGAAGCTGCCACCTCCAGCCTCACTCTAAATAGCTTATACAAAATCAAATTATTCCCATAGTTAACACAAATCCAGCAAGCTGTGGTCCTAAATGCCATCTACATTTATATATTTAC-TTTTTACTGTGTACATTAAGAATTTTGTTGTGCTTTTCACATATCCGATGTATGTTTTCATATTAAACATTCCTCAGTTTCTTGGGAAGGAAAG-AAAAGATCATGAAAAGAGGTACATCAGGAGAGTCGGACTGTAAAGTAACATT--ACACACAACTAGCCAAATCTCTTTTTAATTTAAAAGATAATGTCATCACAACGCAACATatagaaacat-aaagaaaATAAAGTATCCA-CCTAAAATCCCTATTATTCCATGATATTTTCATAGCAACTAGTATatatatcaatatatttttCACAAACCATTCAGTTACACATTGTGTATGC-TTTAGAATTTAAAATATGTATTACCATAGCAGTTCAAACATTGTACTTTTA-GGAAATGT--GGAGACATGGTTCAGTGATTTGATCATTGTGATGATTATTTACAATGCTATCTATTTACGTTAGCAATAAATAATCCTGATATC-AAAGAGACAATACTCATGCACACACCAAGATGGCTGCATG-TTTT-AAATATTTACACATAGCTCTGCCATTTatagctctcccattaagaG-G-AAGTGCGC-TTCTTCAATTCTCTTCCACATTTCCATTAGTCTTGCTTCT-GGGGATGCATCCTTCCATTTCT---GCTTCAGGCCATCCTTCATATTTGTTTGTATCCTTATTGTTCTTTATGTG
p ',28=DJIHHJNNNNQQRRRLJLRJHHJRRNNRIGGG520/.''%&*=BIOLJLQC@=%"%"36%""7KMNNRRRRJHHJRNNRRRNNQJHHJNNLJLRRRRNNNNG9%""69KRQA><;%""ANPRJHHJRQQPQQRRRRRNNRQQRRLJLRRRQQPQNNRRRNNIGGGIRLJLJHHJROML@=&$""9@MNRLJLLJLRQQPQNNNNRRRRLJLRNNRRRO?<$#<?LMQRRNNRRRLJLRNNNNNNQLJLRRRRRRRNNLJLRNNRRRRNNQQLJLNNRLJLNNRRNNRNNRRRRNNNNNNRNNNNLJLRRRRRRLJLRNNRRRRRRRRRRJHHJPB;I=~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~1414KMQRRRNNRJGEA!!#$'BIQRRRNNNNLJLRQQLJLRRRRLJLJHHJRRLJLPPPNMLIC!!"$%(?ADRRNNRRRRRRNNRLJLRRRNNRNNRNNRJHHJRRLJLQQRRNNRRRQQRRRNNRLJLRNNRNNNJI9"$&"$&?CLRNNRRRRLJLPPQQNNRNNNNLJLQNNNNLJLRRLJLRRJHHJNNRNNQQRRQQNNLJLRRRRRNNQNNNNNNLJLNNRRNNNNRRNNRRRRRRRNNRNNNNNNQIGGGIRPD=#7?#7FLONNRRQQRLJLPPQQRRRRRNNRRRRRRNNRRNNRRRNNRNNNNRMLF?"%"$+""$':PNNNNNNRNNNNQQNNRRK@="%"%?DQRRRNNRNNRNNRRNNRQRQQQRLJLRRRRNNQQQRJHHJRQ?<:HKOMMLJLRQPK>AMMPPPLJLRNNRRRNNRRRQQNNRNNRLJLRRNNRRRRRRRLJKOOOOOKJKO;!!"$%(DPPQPQQRRRNNNNRNNJHHJRNNQQRRJHHJQQQQQQQNNRRRRRRRRJHHJRRQQNNLJLRRNNNNRRRRLJLQNNLJLNNNNJGF;!!#$';HRRRRRJHHJQQNNRRRRRRRNNPPPQRRNNRRRRRLJLRRNNRQG;!"!"#$%&)8IRRRNNLJLQPPPIGGGINNLJLJHHJRQRNNRRRRRRQQQNNRRRNNRQQPQQRLJLQIB""#&:DEFIRLJLRRRRLG@""%7HGHJRLJLRRNNRNNNNRRRQQQJHHJRRRRRRNNRRRRPONMMMNOPRNMPOOPIGGGIQQQLJLNNRNNRRRNNQQPQQNNQPQQRPN9""$'BNMNLJLJHHJQQQRRRNNRNNRRRRQOF.**>ADQRNNRRRRJHHI9""%468521#0$2EKMRRRNNNNRRRRRRLJLRRRRRNNQQQRRRRNNRLJLRRNNRRRRRRRQRLJLRRRNNRRRNNRLJLRNNRNNRRQQPNB""#&:DFIRNNRRRRRRRRQOOOOOMNNNRRRNNRRRRQH?###++""$'AFHJLQQPQQRRRRQQRRNNRLJLQQRRQPPPKJLRNNMFB?+3("#&:MNNL8""%8CGONNJ=:83##25IKMLJLNNRNNRRRRNNRRNMNB!!#$';OQRRRNNNNNNRLJI@;"%4"%>CPRNNNNRRNNNNRRQQLJLRLJLRRRRNNNNRNNRNNQLJKKF@:5
p zz{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{o{{{{{{{{{{{{{{ii{{{{U{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{p{{{{{{{{{{{p{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{p{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{ii{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{ii{{{{{{{{{{{{{{{m{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{m{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{aaa{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{ZZZ{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{zzziizzzhzzzzzzzzzzzzzzzzzzzzzzzzziizzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzozzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzozzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzNNzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzzvvvvvvvvvvvvvvvvvnttttoooooooolkkkkkkUbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbb`_\\\[[[YXXXXXXXXXXXXXXXXXXXXXXXXXXXXWWWWWWVVVVVVVUUUUUTTTTTTTTTTTTTTTTTTTTTTTTSSSSSSSSSSSSSSSRRRRRRRRRRRRRRRRRRRKLKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKJJJJJJJJJJJEFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFEEEEEE??>>>>>>>>>>>=<;;;;;:::::9999999999999999999998888888888877777777777777777777777777777777766666666664444444444444444444444444333333333333333333
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