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/* File: bump_.h
* Author: Fred Wobus (fw@sanger.ac.uk)
* Copyright (C) J Thierry-Mieg and R Durbin, 1998
*-------------------------------------------------------------------
* This file is part of the ACEDB genome database package, written by
* Richard Durbin (Sanger Centre, UK) rd@sanger.ac.uk, and
* Jean Thierry-Mieg (CRBM du CNRS, France) mieg@crbm.cnrs-mop.fr
*
* Description: private header for the internals of the BUMP-package
* Exported functions: none
* completion of the BUMP structure to allow
* the inside if the BUMP-package to access the members
* of the structure.
* HISTORY:
* Last edited: Dec 17 16:20 1998 (fw)
* Created: Thu Dec 17 16:17:32 1998 (fw)
*-------------------------------------------------------------------
*/
#ifndef DEF_BUMP__H
#define DEF_BUMP__H
#include "bump.h" /* include public header */
/* allow verification of a BUMP pointer */
extern magic_t BUMP_MAGIC;
/* completion of public opaque type as declared in bump.h */
struct BumpStruct {
magic_t *magic ; /* == &BUMP_MAGIC */
int n ; /* max x, i.e. number of columns */
float *bottom ; /* array of largest y in each column */
int minSpace ; /* longest loop in y */
float sloppy ;
float maxDy ; /* If !doIt && maxDy !=0, Do not add further down */
int max ; /* largest x used (maxX <= n) */
int xAscii, xGapAscii ;
float yAscii ;
} ;
#endif /* DEF_BUMP_H */
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