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Description: Fix some spelling issues
Author: Andreas Tille <tille@debian.org>
Last-Update: 2016-02-01
Forwarded: https://rt.cpan.org/Public/Bug/Display.html?id=169601
--- a/acelib/arraysub.c
+++ b/acelib/arraysub.c
@@ -171,7 +171,7 @@ Array uArrayReCreate (Array a, int n, in
return uArrayCreate(n, size, 0) ;
if(a->size != size)
- messcrash("Type missmatch in uArrayRecreate, you should always "
+ messcrash("Type mismatch in uArrayRecreate, you should always "
"call recreate using the same type") ;
if (n < 1)
--- a/Ace/Browser/AceSubs.pm
+++ b/Ace/Browser/AceSubs.pm
@@ -272,7 +272,7 @@ and the user must make a choice among th
with an ordered list of the objects, and asked to click on one of
them.
-The three arguements are:
+The three arguments are:
$symbol The keyword or query string the user was searching
on, undef if none.
--- a/Ace/Object.pm
+++ b/Ace/Object.pm
@@ -847,7 +847,7 @@ number. For example:
Return the class of the object. The return value may be one of
"float," "int," "date," "tag," "txt," "dna," "peptide," and "scalar."
(The last is used internally by Perl to represent objects created
-programatically prior to committing them to the database.) The class
+programmatically prior to committing them to the database.) The class
may also be a user-constructed type such as Sequence, Clone or
Author. These user-constructed types usually have an initial capital
letter.
@@ -1227,7 +1227,7 @@ Alternatively, you may provide the name
case just the named portion of the subtree in the followed objects
will be filled (v.g.)
-For backward compatability, if follow() is called without any
+For backward compatibility, if follow() is called without any
arguments, it will act like fetch().
=head2 pick() method
@@ -1592,7 +1592,7 @@ the state it was in prior to the last co
rollback() works by deleting the object from Perl memory and fetching
the object anew from AceDB. If someone has changed the object in the
database while you were working with it, you will see this version,
-ot the one you originally fetched.
+or the one you originally fetched.
If you are creating an entirely new object, you I<must> add at least
one tag in order to enter the object into the database.
--- a/Ace/Sequence/Feature.pm
+++ b/Ace/Sequence/Feature.pm
@@ -150,7 +150,7 @@ sub tag2ace {
return $class->new(Text=>$data[0]) if $tag eq 'Note';
# for homols, we create the indicated Protein or Sequence object
- # then generate a bogus Homology object (for future compatability??)
+ # then generate a bogus Homology object (for future compatibility??)
if ($tag eq 'Target') {
my ($objname,$start,$end) = @data;
my ($classe,$name) = $objname =~ /^(\w+):(.+)/;
--- a/Ace/Sequence.pm
+++ b/Ace/Sequence.pm
@@ -855,7 +855,7 @@ below).
An offset from the beginning of the source sequence. The retrieved
I<Ace::Sequence> will begin at this position. The offset can be any
-positive or negative integer. Offets are B<0-based>.
+positive or negative integer. Offsets are B<0-based>.
=item -length
@@ -1147,7 +1147,7 @@ Sequence object (usually a cosmid sequen
If a reference sequence was provided when the I<Ace::Sequence> was
created, it will be used by default to set the coordinate system.
-Relative coordinates can be reenabled by providing a false value to
+Relative coordinates can be re-enabled by providing a false value to
B<-abs>.
Ordinarily the coordinate system manipulations automatically "do what
--- a/Ace.pm
+++ b/Ace.pm
@@ -1257,7 +1257,7 @@ Ace->error();
$object = $db->parse('data to parse');
This will parse the Ace tags contained within the "data to parse"
-string, convert it into an object in the databse, and return the
+string, convert it into an object in the database, and return the
resulting Ace::Object. In case of a parse error, the undefined value
will be returned and a (hopefully informative) description of the
error will be returned by Ace->error().
--- a/Ace/Sequence/Multi.pm
+++ b/Ace/Sequence/Multi.pm
@@ -201,7 +201,7 @@ below).
An offset from the beginning of the source sequence. The retrieved
I<Ace::Sequence> will begin at this position. The offset can be any
-positive or negative integer. Offets are B<0-based>.
+positive or negative integer. Offsets are B<0-based>.
=item -length
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