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#ifndef NOCURL
#include <curl/curl.h>
#endif
#include <stdio.h>
#include <stdlib.h>
#include <string.h>
#include <unistd.h>
#include "bigWigIO.h"
#include <inttypes.h>
#include <errno.h>
size_t GLOBAL_DEFAULTBUFFERSIZE;
#ifndef NOCURL
uint64_t getContentLength(URL_t *URL) {
double size;
if(curl_easy_getinfo(URL->x.curl, CURLINFO_CONTENT_LENGTH_DOWNLOAD, &size) != CURLE_OK) {
return 0;
}
if(size== -1.0) return 0;
return (uint64_t) size;
}
//Fill the buffer, note that URL may be left in an unusable state on error!
CURLcode urlFetchData(URL_t *URL, unsigned long bufSize) {
CURLcode rv;
char range[1024];
if(URL->filePos != (size_t) -1) URL->filePos += URL->bufLen;
else URL->filePos = 0;
URL->bufPos = URL->bufLen = 0; //Otherwise, we can't copy anything into the buffer!
sprintf(range,"%lu-%lu", URL->filePos, URL->filePos+bufSize-1);
rv = curl_easy_setopt(URL->x.curl, CURLOPT_RANGE, range);
if(rv != CURLE_OK) {
fprintf(stderr, "[urlFetchData] Couldn't set the range (%s)\n", range);
return rv;
}
rv = curl_easy_perform(URL->x.curl);
errno = 0; //Sometimes curl_easy_perform leaves a random errno remnant
return rv;
}
//Read data into a buffer, ideally from a buffer already in memory
//The loop is likely no longer needed.
size_t url_fread(void *obuf, size_t obufSize, URL_t *URL) {
size_t remaining = obufSize, fetchSize;
void *p = obuf;
CURLcode rv;
while(remaining) {
if(!URL->bufLen) {
rv = urlFetchData(URL, URL->bufSize);
if(rv != CURLE_OK) {
fprintf(stderr, "[url_fread] urlFetchData (A) returned %s\n", curl_easy_strerror(rv));
return 0;
}
} else if(URL->bufLen < URL->bufPos + remaining) { //Copy the remaining buffer and reload the buffer as needed
p = memcpy(p, URL->memBuf+URL->bufPos, URL->bufLen - URL->bufPos);
if(!p) return 0;
p += URL->bufLen - URL->bufPos;
remaining -= URL->bufLen - URL->bufPos;
if(remaining) {
if(!URL->isCompressed) {
fetchSize = URL->bufSize;
} else {
fetchSize = (remaining<URL->bufSize)?remaining:URL->bufSize;
}
rv = urlFetchData(URL, fetchSize);
if(rv != CURLE_OK) {
fprintf(stderr, "[url_fread] urlFetchData (B) returned %s\n", curl_easy_strerror(rv));
return 0;
}
}
} else {
p = memcpy(p, URL->memBuf+URL->bufPos, remaining);
if(!p) return 0;
URL->bufPos += remaining;
remaining = 0;
}
}
return obufSize;
}
#endif
//Returns the number of bytes requested or a smaller number on error
//Note that in the case of remote files, the actual amount read may be less than the return value!
size_t urlRead(URL_t *URL, void *buf, size_t bufSize) {
#ifndef NOCURL
if(URL->type==0) {
return fread(buf, bufSize, 1, URL->x.fp)*bufSize;
} else {
return url_fread(buf, bufSize, URL);
}
#else
return fread(buf, bufSize, 1, URL->x.fp)*bufSize;
#endif
}
size_t bwFillBuffer(void *inBuf, size_t l, size_t nmemb, void *pURL) {
URL_t *URL = (URL_t*) pURL;
void *p = URL->memBuf;
size_t copied = l*nmemb;
if(!p) return 0;
p += URL->bufLen;
if(l*nmemb > URL->bufSize - URL->bufPos) { //We received more than we can store!
copied = URL->bufSize - URL->bufLen;
}
memcpy(p, inBuf, copied);
URL->bufLen += copied;
if(!URL->memBuf) return 0; //signal error
return copied;
}
//Seek to an arbitrary location, returning a CURLcode
//Note that a local file returns CURLE_OK on success or CURLE_FAILED_INIT on any error;
CURLcode urlSeek(URL_t *URL, size_t pos) {
#ifndef NOCURL
char range[1024];
CURLcode rv;
if(URL->type == BWG_FILE) {
#endif
if(fseek(URL->x.fp, pos, SEEK_SET) == 0) {
errno = 0;
return CURLE_OK;
} else {
return CURLE_FAILED_INIT; //This is arbitrary
}
#ifndef NOCURL
} else {
//If the location is covered by the buffer then don't seek!
if(pos < URL->filePos || pos >= URL->filePos+URL->bufLen) {
URL->filePos = pos;
URL->bufLen = 0; //Otherwise, filePos will get incremented on the next read!
URL->bufPos = 0;
//Maybe this works for FTP?
sprintf(range,"%lu-%lu", pos, pos+URL->bufSize-1);
rv = curl_easy_setopt(URL->x.curl, CURLOPT_RANGE, range);
if(rv != CURLE_OK) {
fprintf(stderr, "[urlSeek] Couldn't set the range (%s)\n", range);
return rv;
}
rv = curl_easy_perform(URL->x.curl);
if(rv != CURLE_OK) {
fprintf(stderr, "[urlSeek] curl_easy_perform received an error!\n");
}
errno = 0; //Don't propogate remnant resolved libCurl errors
return rv;
} else {
URL->bufPos = pos-URL->filePos;
return CURLE_OK;
}
}
#endif
}
URL_t *urlOpen(char *fname, CURLcode (*callBack)(CURL*), const char *mode) {
URL_t *URL = calloc(1, sizeof(URL_t));
if(!URL) return NULL;
char *url = NULL, *req = NULL;
#ifndef NOCURL
CURLcode code;
char range[1024];
#endif
URL->fname = fname;
if((!mode) || (strchr(mode, 'w') == 0)) {
//Set the protocol
#ifndef NOCURL
if(strncmp(fname, "http://", 7) == 0) URL->type = BWG_HTTP;
else if(strncmp(fname, "https://", 8) == 0) URL->type = BWG_HTTPS;
else if(strncmp(fname, "ftp://", 6) == 0) URL->type = BWG_FTP;
else URL->type = BWG_FILE;
#else
URL->type = BWG_FILE;
#endif
//local file?
if(URL->type == BWG_FILE) {
URL->filePos = -1; //This signals that nothing has been read
URL->x.fp = fopen(fname, "rb");
if(!(URL->x.fp)) {
free(URL);
fprintf(stderr, "[urlOpen] Couldn't open %s for reading\n", fname);
return NULL;
}
#ifndef NOCURL
} else {
//Remote file, set up the memory buffer and get CURL ready
URL->memBuf = malloc(GLOBAL_DEFAULTBUFFERSIZE);
if(!(URL->memBuf)) {
free(URL);
fprintf(stderr, "[urlOpen] Couldn't allocate enough space for the file buffer!\n");
return NULL;
}
URL->bufSize = GLOBAL_DEFAULTBUFFERSIZE;
URL->x.curl = curl_easy_init();
if(!(URL->x.curl)) {
fprintf(stderr, "[urlOpen] curl_easy_init() failed!\n");
goto error;
}
//Negotiate a reasonable HTTP authentication method
if(curl_easy_setopt(URL->x.curl, CURLOPT_HTTPAUTH, CURLAUTH_ANY) != CURLE_OK) {
fprintf(stderr, "[urlOpen] Failed instructing curl to use any HTTP authentication it finds to be suitable!\n");
goto error;
}
//Follow redirects
if(curl_easy_setopt(URL->x.curl, CURLOPT_FOLLOWLOCATION, 1L) != CURLE_OK) {
fprintf(stderr, "[urlOpen] Failed instructing curl to follow redirects!\n");
goto error;
}
//Set the URL
if(curl_easy_setopt(URL->x.curl, CURLOPT_URL, fname) != CURLE_OK) {
fprintf(stderr, "[urlOpen] Couldn't set CURLOPT_URL!\n");
goto error;
}
//Set the range, which doesn't do anything for HTTP
sprintf(range, "0-%lu", URL->bufSize-1);
if(curl_easy_setopt(URL->x.curl, CURLOPT_RANGE, range) != CURLE_OK) {
fprintf(stderr, "[urlOpen] Couldn't set CURLOPT_RANGE (%s)!\n", range);
goto error;
}
//Set the callback info, which means we no longer need to directly deal with sockets and header!
if(curl_easy_setopt(URL->x.curl, CURLOPT_WRITEFUNCTION, bwFillBuffer) != CURLE_OK) {
fprintf(stderr, "[urlOpen] Couldn't set CURLOPT_WRITEFUNCTION!\n");
goto error;
}
if(curl_easy_setopt(URL->x.curl, CURLOPT_WRITEDATA, (void*)URL) != CURLE_OK) {
fprintf(stderr, "[urlOpen] Couldn't set CURLOPT_WRITEDATA!\n");
goto error;
}
//Ignore certificate errors with https, libcurl just isn't reliable enough with conda
if(curl_easy_setopt(URL->x.curl, CURLOPT_SSL_VERIFYPEER, 0) != CURLE_OK) {
fprintf(stderr, "[urlOpen] Couldn't set CURLOPT_SSL_VERIFYPEER to 0!\n");
goto error;
}
if(curl_easy_setopt(URL->x.curl, CURLOPT_SSL_VERIFYHOST, 0) != CURLE_OK) {
fprintf(stderr, "[urlOpen] Couldn't set CURLOPT_SSL_VERIFYHOST to 0!\n");
goto error;
}
if(callBack) {
code = callBack(URL->x.curl);
if(code != CURLE_OK) {
fprintf(stderr, "[urlOpen] The user-supplied call back function returned an error: %s\n", curl_easy_strerror(code));
goto error;
}
}
code = curl_easy_perform(URL->x.curl);
errno = 0; //Sometimes curl_easy_perform leaves a random errno remnant
if(code != CURLE_OK) {
fprintf(stderr, "[urlOpen] curl_easy_perform received an error: %s\n", curl_easy_strerror(code));
goto error;
}
#endif
}
} else {
URL->type = BWG_FILE;
URL->x.fp = fopen(fname, mode);
if(!(URL->x.fp)) {
free(URL);
fprintf(stderr, "[urlOpen] Couldn't open %s for writing\n", fname);
return NULL;
}
}
if(url) free(url);
if(req) free(req);
return URL;
#ifndef NOCURL
error:
if(url) free(url);
if(req) free(req);
free(URL->memBuf);
curl_easy_cleanup(URL->x.curl);
free(URL);
return NULL;
#endif
}
//Performs the necessary free() operations and handles cleaning up curl
void urlClose(URL_t *URL) {
if(URL->type == BWG_FILE) {
fclose(URL->x.fp);
#ifndef NOCURL
} else {
free(URL->memBuf);
curl_easy_cleanup(URL->x.curl);
#endif
}
free(URL);
}
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