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t/00-critic.t ............... skipped: Author test. Set $ENV{TEST_AUTHOR} to a true value to run.
t/00-distribution.t .........
1..9
ok 1 - Checking MANIFEST integrity
ok 2 - use Bio::Das::Lite;
ok 3 - Bio::Das::Lite defines a version
ok 4 - POD test for blib/lib/Bio/Das/Lite.pm
ok 5 - MANIFEST exists
ok 6 - README exists
ok 7 - Changes(.pod)? or ChangeLog(.pod)? exists
ok 8 - Build.PL or Makefile.PL exists
ok 9 - Pod Coverage ok
ok
t/00-pod.t ..................
1..1
ok 1 - POD test for blib/lib/Bio/Das/Lite.pm
ok
t/00-podcoverage.t ..........
1..1
ok 1 - Pod coverage on Bio::Das::Lite
ok
t/01-general.t ..............
1..7
ok 1 - The object isa Bio::Das::Lite
ok 2 - get/set timeout
ok 3 - get/set http_proxy
ok 4 - plain http fetch
ok 5 - feature-by-id returned a list
ok 6 - feature-by=id returned one or no elements
ok 7 - feature-by-id element was a hash
ok
t/02-statuscodes.t ..........
1..6
ok 1 - HTTP OK, X-DAS OK (code)
ok 2 - HTTP OK, X-DAS OK (message)
ok 3 - HTTP OK, X-DAS-Status error (code)
ok 4 - HTTP OK, X-DAS-Status error (message)
ok 5 - HTTP error, no X-DAS-Status (code)
ok 6 - HTTP error, no X-DAS-Status (message)
ok
t/05-singledsn.t ............
1..33
ok 1 - new with a single dsn returned something
ok 2 - single service get gave an array ref
ok 3 - single service get had length of one
ok 4 - single service get returned the same dsn
ok 5 - dsns call returned something (service http://das.sanger.ac.uk/das)
ok 6 - dsns call gave a hash (service http://das.sanger.ac.uk/das)
ok 7 - dsns call gave one key service http://das.sanger.ac.uk/das)
ok 8 - dsns call returned OK status (service http://das.sanger.ac.uk/das status 200 OK)
ok 9 - dsns call gave a arrayref value (service http://das.sanger.ac.uk/das)
ok 10 - dsns call returned at least one source (service http://das.sanger.ac.uk/das)
ok 11 - all sources parsed correctly into hashes (service http://das.sanger.ac.uk/das)
ok 12 - new with a single dsn returned something
ok 13 - single service get gave an array ref
ok 14 - single service get had length of one
ok 15 - single service get returned the same dsn
ok 16 - dsns call returned something (service http://das.ensembl.org/das/dsn)
ok 17 - dsns call gave a hash (service http://das.ensembl.org/das/dsn)
ok 18 - dsns call gave one key service http://das.ensembl.org/das/dsn)
ok 19 - dsns call returned OK status (service http://das.ensembl.org/das/dsn status 200 OK)
ok 20 - dsns call gave a arrayref value (service http://das.ensembl.org/das/dsn)
ok 21 - dsns call returned at least one source (service http://das.ensembl.org/das/dsn)
ok 22 - all sources parsed correctly into hashes (service http://das.ensembl.org/das/dsn)
ok 23 - new with a single dsn returned something
ok 24 - single service get gave an array ref
ok 25 - single service get had length of one
ok 26 - single service get returned the same dsn
ok 27 - dsns call returned something (service http://das.ensembl.org/das/dsn\#foo)
ok 28 - dsns call gave a hash (service http://das.ensembl.org/das/dsn\#foo)
ok 29 - dsns call gave one key service http://das.ensembl.org/das/dsn\#foo)
ok 30 - dsns call returned OK status (service http://das.ensembl.org/das/dsn\#foo status 200 OK)
ok 31 - dsns call gave a arrayref value (service http://das.ensembl.org/das/dsn\#foo)
ok 32 - dsns call returned at least one source (service http://das.ensembl.org/das/dsn\#foo)
ok 33 - all sources parsed correctly into hashes (service http://das.ensembl.org/das/dsn\#foo)
ok
t/06-singledsn-singleseg.t ..
1..13
ok 1 - entry_points returns a hash
ok 2 - entry_points returns the same number of sources
ok 3 - entry_points hash contains an array
ok 4 - types returns a hash
ok 5 - types returns the same number of sources
ok 6 - types hash contains an array
ok 7 - features returns a hash
ok 8 - features returns the same number of sources
ok 9 - features hash contains an array
ok 10 - sequence returns a hash
ok 11 - sequence returns the same number of sources
ok 12 - sequence hash contains an array
ok 13 - requesting 1Kb of sequence returns 1Kb
ok
t/07-singledsn-multiseg.t ...
1..10
ok 1 - features returns a hash
ok 2 - features returns data to the tune of (number of sources * number of segments)
ok 3 - features hash contains an array
ok 4 - features returns some data
ok 5 - features returns some data
ok 6 - sequence returns a hash
ok 7 - sequence returns data to the tune of (number of sources * number of segments)
ok 8 - sequence hash contains an array
ok 9 - sequence returns some data
ok 10 - sequence returns some data
ok
t/10-multidsn.t .............
1..11
ok 1 - new with a multi dsn returned something
ok 2 - multi service get gave an array ref
ok 3 - multi service get had length of one
ok 4 - multi service get returned the same dsns in the same order
ok 5 - dsns call returned something
ok 6 - dsns call gave a hash
ok 7 - dsns call gave one key
ok 8 - dsns call returned OK status (status is 200 OK)
ok 9 - dsns call gave a arrayref value for the one key
ok 10 - dsns call returned at least one source
ok 11 - all sources parsed correctly into hashes
ok
t/20-authentication.t .......
1..3
ok 1 - http_proxy processed ok
ok 2 - proxy_user processed ok
ok 3 - proxy_pass processed ok
ok
t/21-proxy.t ................ skipped: Proxy testing requires POE and WWW::Curl::Simple
t/40-dna.t ..................
1..1
ok 1 - is_deeply
ok
t/45-sequence.t .............
1..1
ok 1 - is_deeply
ok
t/50-entry_points.t .........
1..1
ok 1 - Correct number of segments returned
ok
t/60-features.t .............
1..3
ok 1 - Whole-response-mode gave correct number of features returned
ok 2 - bug from Nick Landridge 2011-05-05
ok 3 - bug from Nick Landridge 2011-05-05
ok
t/60-features_chunked.t .....
1..1
ok 1 - Chunked-response-mode gave number of features returned
ok
t/60-features_empty.t .......
1..5
ok 1 - Empty segment gives a hash with seginfo rather than an empty array of features
ok 2 - segment_id
ok 3 - segment_version
ok 4 - segment_start
ok 5 - segment_stop
ok
t/61-features_group.t .......
1..5
ok 1 - Corrent number of links returned
ok 2 - Corrent number of notes returned
ok 3 - Correct link href
ok 4 - Correct link text
ok 5 - Correct note text
ok
t/70-alignment.t ............
1..4
ok 1 - Whole-response-mode gave correct number of features returned
ok 2 - Got expected number of alignment objects
ok 3 - Got expected number of alignment blocks
ok 4 - Got cigar string
ok
t/80-structure.t ............
1..9
ok 1 - Whole-response-mode gave correct structure
ok 2 - Got the correct number of chains
ok 3 - Got the correct number of groups for the chain
ok 4 - Got the correct number of atoms for the first group
ok 5 - Got the correct number of het
ok 6 - Got the correct number of groups for the het
ok 7 - Got the correct number of atoms for the first group
ok 8 - Got connection data
ok 9 - Got correct number of atoms in connection
ok
t/90-sources.t ..............
1..2
ok 1 - Whole-response-mode gave correct number of sources returned
ok 2 - Got maintainers email
ok
All tests successful.
Files=22, Tests=126, 5 wallclock secs ( 0.11 usr 0.06 sys + 3.51 cusr 0.56 csys = 4.24 CPU)
Result: PASS
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