1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
|
Source: libbio-db-seqfeature-perl
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Michael R. Crusoe <crusoe@debian.org>,
Étienne Mollier <emollier@debian.org>
Section: perl
Testsuite: autopkgtest-pkg-perl
Priority: optional
Build-Depends: debhelper-compat (= 13)
Build-Depends-Indep: libbio-perl-perl,
libbio-db-gff-perl,
libdbd-pg-perl,
libdbd-sqlite3-perl,
libdbi-perl,
perl,
libtest-most-perl
Standards-Version: 4.7.0
Vcs-Browser: https://salsa.debian.org/med-team/libbio-db-seqfeature-perl
Vcs-Git: https://salsa.debian.org/med-team/libbio-db-seqfeature-perl.git
Homepage: https://metacpan.org/release/Bio-DB-SeqFeature
Rules-Requires-Root: no
Package: libbio-db-seqfeature-perl
Architecture: all
Depends: ${misc:Depends},
${perl:Depends},
libbio-perl-perl,
libbio-db-gff-perl,
libdbd-pg-perl,
libdbd-sqlite3-perl,
libdbi-perl
Breaks: libbio-perl-perl (<< 1.7.3)
Replaces: libbio-perl-perl (<< 1.7.3)
Description: Normalized feature for use with Bio::DB::SeqFeature::Store
The Bio::DB::SeqFeature object is the default SeqFeature class stored in
Bio::DB::SeqFeature databases. It implements both the
Bio::DB::SeqFeature::NormalizedFeatureI and
Bio::DB::SeqFeature::NormalizedTableFeatureI interfaces, which means that its
subfeatures, if any, are stored in the database in a normalized fashion, and
that the parent/child hierarchy of features and subfeatures are also stored
in the database as set of tuples. This provides efficiencies in both storage
and retrieval speed.
.
Typically you will not create Bio::DB::SeqFeature directly, but will ask the
database to do so on your behalf, as described in Bio::DB::SeqFeature::Store.
|
