1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
|
---
abstract: 'Generate GD images of Bio::Seq objects'
author:
- 'Lincoln Stein <lincoln.stein@oicr.on.ca>'
build_requires: {}
configure_requires:
Module::Build: '0.42'
dynamic_config: 1
generated_by: 'Module::Build version 0.4218, CPAN::Meta::Converter version 2.150001'
license: perl
meta-spec:
url: http://module-build.sourceforge.net/META-spec-v1.4.html
version: '1.4'
name: Bio-Graphics
provides:
Bio::Graphics:
file: lib/Bio/Graphics.pm
version: '2.40'
Bio::Graphics::ConfiguratorI:
file: lib/Bio/Graphics/ConfiguratorI.pm
Bio::Graphics::DrawTransmembrane:
file: lib/Bio/Graphics/DrawTransmembrane.pm
Bio::Graphics::Feature:
file: lib/Bio/Graphics/Feature.pm
Bio::Graphics::FeatureBase:
file: lib/Bio/Graphics/FeatureBase.pm
Bio::Graphics::FeatureDir:
file: lib/Bio/Graphics/FeatureDir.pm
Bio::Graphics::FeatureFile:
file: lib/Bio/Graphics/FeatureFile.pm
Bio::Graphics::FeatureFile::Iterator:
file: lib/Bio/Graphics/FeatureFile/Iterator.pm
Bio::Graphics::FileSplitter:
file: lib/Bio/Graphics/FeatureDir.pm
Bio::Graphics::GDWrapper:
file: lib/Bio/Graphics/GDWrapper.pm
Bio::Graphics::Glyph:
file: lib/Bio/Graphics/Glyph.pm
Bio::Graphics::Glyph::Factory:
file: lib/Bio/Graphics/Glyph/Factory.pm
Bio::Graphics::Glyph::alignment:
file: lib/Bio/Graphics/Glyph/alignment.pm
Bio::Graphics::Glyph::allele_tower:
file: lib/Bio/Graphics/Glyph/allele_tower.pm
Bio::Graphics::Glyph::anchored_arrow:
file: lib/Bio/Graphics/Glyph/anchored_arrow.pm
Bio::Graphics::Glyph::arrow:
file: lib/Bio/Graphics/Glyph/arrow.pm
Bio::Graphics::Glyph::box:
file: lib/Bio/Graphics/Glyph/box.pm
Bio::Graphics::Glyph::broken_line:
file: lib/Bio/Graphics/Glyph/broken_line.pm
Bio::Graphics::Glyph::cds:
file: lib/Bio/Graphics/Glyph/cds.pm
Bio::Graphics::Glyph::christmas_arrow:
file: lib/Bio/Graphics/Glyph/christmas_arrow.pm
Bio::Graphics::Glyph::cross:
file: lib/Bio/Graphics/Glyph/cross.pm
Bio::Graphics::Glyph::crossbox:
file: lib/Bio/Graphics/Glyph/crossbox.pm
Bio::Graphics::Glyph::dashed_line:
file: lib/Bio/Graphics/Glyph/dashed_line.pm
Bio::Graphics::Glyph::decorated_gene:
file: lib/Bio/Graphics/Glyph/decorated_gene.pm
Bio::Graphics::Glyph::decorated_transcript:
file: lib/Bio/Graphics/Glyph/decorated_transcript.pm
Bio::Graphics::Glyph::diamond:
file: lib/Bio/Graphics/Glyph/diamond.pm
Bio::Graphics::Glyph::dna:
file: lib/Bio/Graphics/Glyph/dna.pm
Bio::Graphics::Glyph::dot:
file: lib/Bio/Graphics/Glyph/dot.pm
Bio::Graphics::Glyph::dumbbell:
file: lib/Bio/Graphics/Glyph/dumbbell.pm
Bio::Graphics::Glyph::ellipse:
file: lib/Bio/Graphics/Glyph/ellipse.pm
Bio::Graphics::Glyph::ex:
file: lib/Bio/Graphics/Glyph/ex.pm
Bio::Graphics::Glyph::extending_arrow:
file: lib/Bio/Graphics/Glyph/extending_arrow.pm
Bio::Graphics::Glyph::fb_shmiggle:
file: lib/Bio/Graphics/Glyph/fb_shmiggle.pm
Bio::Graphics::Glyph::fixedwidth:
file: lib/Bio/Graphics/Glyph/fixedwidth.pm
Bio::Graphics::Glyph::flag:
file: lib/Bio/Graphics/Glyph/flag.pm
Bio::Graphics::Glyph::gene:
file: lib/Bio/Graphics/Glyph/gene.pm
Bio::Graphics::Glyph::generic:
file: lib/Bio/Graphics/Glyph/generic.pm
Bio::Graphics::Glyph::graded_segments:
file: lib/Bio/Graphics/Glyph/graded_segments.pm
Bio::Graphics::Glyph::group:
file: lib/Bio/Graphics/Glyph/group.pm
Bio::Graphics::Glyph::hat:
file: lib/Bio/Graphics/Glyph/hat.pm
Bio::Graphics::Glyph::heat_map:
file: lib/Bio/Graphics/Glyph/heat_map.pm
Bio::Graphics::Glyph::heat_map_ideogram:
file: lib/Bio/Graphics/Glyph/heat_map_ideogram.pm
Bio::Graphics::Glyph::heterogeneous_segments:
file: lib/Bio/Graphics/Glyph/heterogeneous_segments.pm
Bio::Graphics::Glyph::hidden:
file: lib/Bio/Graphics/Glyph/hidden.pm
Bio::Graphics::Glyph::hybrid_plot:
file: lib/Bio/Graphics/Glyph/hybrid_plot.pm
version: '1.0'
Bio::Graphics::Glyph::ideogram:
file: lib/Bio/Graphics/Glyph/ideogram.pm
Bio::Graphics::Glyph::image:
file: lib/Bio/Graphics/Glyph/image.pm
Bio::Graphics::Glyph::lightning:
file: lib/Bio/Graphics/Glyph/lightning.pm
Bio::Graphics::Glyph::line:
file: lib/Bio/Graphics/Glyph/line.pm
Bio::Graphics::Glyph::merge_parts:
file: lib/Bio/Graphics/Glyph/merge_parts.pm
Bio::Graphics::Glyph::merged_alignment:
file: lib/Bio/Graphics/Glyph/merged_alignment.pm
Bio::Graphics::Glyph::minmax:
file: lib/Bio/Graphics/Glyph/minmax.pm
Bio::Graphics::Glyph::operon:
file: lib/Bio/Graphics/Glyph/operon.pm
Bio::Graphics::Glyph::oval:
file: lib/Bio/Graphics/Glyph/oval.pm
Bio::Graphics::Glyph::pairplot:
file: lib/Bio/Graphics/Glyph/pairplot.pm
Bio::Graphics::Glyph::pentagram:
file: lib/Bio/Graphics/Glyph/pentagram.pm
Bio::Graphics::Glyph::phylo_align:
file: lib/Bio/Graphics/Glyph/phylo_align.pm
Bio::Graphics::Glyph::pinsertion:
file: lib/Bio/Graphics/Glyph/pinsertion.pm
Bio::Graphics::Glyph::point_glyph:
file: lib/Bio/Graphics/Glyph/point_glyph.pm
Bio::Graphics::Glyph::primers:
file: lib/Bio/Graphics/Glyph/primers.pm
Bio::Graphics::Glyph::processed_transcript:
file: lib/Bio/Graphics/Glyph/processed_transcript.pm
Bio::Graphics::Glyph::protein:
file: lib/Bio/Graphics/Glyph/protein.pm
Bio::Graphics::Glyph::ragged_ends:
file: lib/Bio/Graphics/Glyph/ragged_ends.pm
Bio::Graphics::Glyph::rainbow_gene:
file: lib/Bio/Graphics/Glyph/rainbow_gene.pm
Bio::Graphics::Glyph::read_pair:
file: lib/Bio/Graphics/Glyph/read_pair.pm
Bio::Graphics::Glyph::redgreen_box:
file: lib/Bio/Graphics/Glyph/redgreen_box.pm
Bio::Graphics::Glyph::redgreen_segment:
file: lib/Bio/Graphics/Glyph/redgreen_segment.pm
Bio::Graphics::Glyph::repeating_shape:
file: lib/Bio/Graphics/Glyph/repeating_shape.pm
Bio::Graphics::Glyph::rndrect:
file: lib/Bio/Graphics/Glyph/rndrect.pm
Bio::Graphics::Glyph::ruler_arrow:
file: lib/Bio/Graphics/Glyph/ruler_arrow.pm
Bio::Graphics::Glyph::saw_teeth:
file: lib/Bio/Graphics/Glyph/saw_teeth.pm
Bio::Graphics::Glyph::scale:
file: lib/Bio/Graphics/Glyph/scale.pm
Bio::Graphics::Glyph::segmented_keyglyph:
file: lib/Bio/Graphics/Glyph/segmented_keyglyph.pm
Bio::Graphics::Glyph::segments:
file: lib/Bio/Graphics/Glyph/segments.pm
Bio::Graphics::Glyph::smoothing:
file: lib/Bio/Graphics/Glyph/smoothing.pm
Bio::Graphics::Glyph::so_transcript:
file: lib/Bio/Graphics/Glyph/so_transcript.pm
Bio::Graphics::Glyph::span:
file: lib/Bio/Graphics/Glyph/span.pm
Bio::Graphics::Glyph::spectrogram:
file: lib/Bio/Graphics/Glyph/spectrogram.pm
Bio::Graphics::Glyph::splice_site:
file: lib/Bio/Graphics/Glyph/splice_site.pm
Bio::Graphics::Glyph::stackedplot:
file: lib/Bio/Graphics/Glyph/stackedplot.pm
Bio::Graphics::Glyph::ternary_plot:
file: lib/Bio/Graphics/Glyph/ternary_plot.pm
Bio::Graphics::Glyph::text_in_box:
file: lib/Bio/Graphics/Glyph/text_in_box.pm
Bio::Graphics::Glyph::three_letters:
file: lib/Bio/Graphics/Glyph/three_letters.pm
Bio::Graphics::Glyph::tic_tac_toe:
file: lib/Bio/Graphics/Glyph/tic_tac_toe.pm
Bio::Graphics::Glyph::toomany:
file: lib/Bio/Graphics/Glyph/toomany.pm
Bio::Graphics::Glyph::topoview:
file: lib/Bio/Graphics/Glyph/topoview.pm
Bio::Graphics::Glyph::trace:
file: lib/Bio/Graphics/Glyph/trace.pm
Bio::Graphics::Glyph::track:
file: lib/Bio/Graphics/Glyph/track.pm
Bio::Graphics::Glyph::transcript:
file: lib/Bio/Graphics/Glyph/transcript.pm
Bio::Graphics::Glyph::transcript2:
file: lib/Bio/Graphics/Glyph/transcript2.pm
Bio::Graphics::Glyph::translation:
file: lib/Bio/Graphics/Glyph/translation.pm
Bio::Graphics::Glyph::triangle:
file: lib/Bio/Graphics/Glyph/triangle.pm
Bio::Graphics::Glyph::two_bolts:
file: lib/Bio/Graphics/Glyph/two_bolts.pm
Bio::Graphics::Glyph::vista_plot:
file: lib/Bio/Graphics/Glyph/vista_plot.pm
version: '1.0'
Bio::Graphics::Glyph::wave:
file: lib/Bio/Graphics/Glyph/wave.pm
Bio::Graphics::Glyph::weighted_arrow:
file: lib/Bio/Graphics/Glyph/weighted_arrow.pm
Bio::Graphics::Glyph::whiskerplot:
file: lib/Bio/Graphics/Glyph/whiskerplot.pm
Bio::Graphics::Glyph::wiggle_box:
file: lib/Bio/Graphics/Glyph/wiggle_box.pm
Bio::Graphics::Glyph::wiggle_data:
file: lib/Bio/Graphics/Glyph/wiggle_data.pm
Bio::Graphics::Glyph::wiggle_density:
file: lib/Bio/Graphics/Glyph/wiggle_density.pm
Bio::Graphics::Glyph::wiggle_whiskers:
file: lib/Bio/Graphics/Glyph/wiggle_whiskers.pm
Bio::Graphics::Glyph::wiggle_xyplot:
file: lib/Bio/Graphics/Glyph/wiggle_xyplot.pm
Bio::Graphics::Glyph::xyplot:
file: lib/Bio/Graphics/Glyph/xyplot.pm
Bio::Graphics::Layout:
file: lib/Bio/Graphics/Layout.pm
Bio::Graphics::Layout::Contour:
file: lib/Bio/Graphics/Layout.pm
Bio::Graphics::Math:
file: lib/Bio/Graphics/Layout.pm
Bio::Graphics::Panel:
file: lib/Bio/Graphics/Panel.pm
Bio::Graphics::Pictogram:
file: lib/Bio/Graphics/Pictogram.pm
Bio::Graphics::RendererI:
file: lib/Bio/Graphics/RendererI.pm
Bio::Graphics::Util:
file: lib/Bio/Graphics/Util.pm
Bio::Graphics::Wiggle:
file: lib/Bio/Graphics/Wiggle.pm
version: '1.0'
Bio::Graphics::Wiggle::Loader:
file: lib/Bio/Graphics/Wiggle/Loader.pm
recommends:
GD::SVG: '0.32'
Text::ParseWords: '3.26'
requires:
Bio::Coordinate::Pair: '1.005009001'
Bio::Root::Version: '1.005009001'
CGI: '0'
GD: '2.3'
Statistics::Descriptive: '2.6'
resources:
license: http://dev.perl.org/licenses/
version: '2.40'
|
