File: triangle.pm

package info (click to toggle)
libbio-graphics-perl 2.40-7
  • links: PTS, VCS
  • area: main
  • in suites: forky, sid
  • size: 3,276 kB
  • sloc: perl: 21,801; makefile: 14
file content (149 lines) | stat: -rwxr-xr-x 3,922 bytes parent folder | download | duplicates (5)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
package Bio::Graphics::Glyph::triangle;
# DAS-compatible package to use for drawing a triangle

use strict;
use base qw(Bio::Graphics::Glyph::point_glyph);

sub pad_left {
  my $self = shift;
  my $left = $self->SUPER::pad_left;
  return $left unless $self->option('point');
  my $extra = $self->option('height')/3;
  return $extra > $left ? $extra : $left;
}

sub pad_right {
  my $self = shift;
  my $right = $self->SUPER::pad_right;
  return $right unless $self->option('point');
  my $extra = $self->option('height')/3;
  return $extra > $right ? $extra : $right;
}

sub orient {
    my $self = shift;
    my $o    = $self->option('orient');
    $o       = $self->option('direction') unless defined $o;
    return $o || 'S';
}

sub draw_component {
  my $self = shift;
  my $gd = shift;
  my $fg = $self->fgcolor;
  my $orient = $self->option('orient') || 'S';

  # find the center and vertices
  my ($x1,$y1,$x2,$y2) = $self->calculate_boundaries(@_);
  my $xmid = ($x1+$x2)/2;
  my $ymid = ($y1+$y2)/2;

  my ($vx1,$vy1,$vx2,$vy2,$vx3,$vy3);

  #make an equilateral
  my ($p,$q) = ($self->option('height'),($x2-$x1)/2);
  if ($self->option('point')){
    $q = $p/sqrt(3); #2;
    $x1 = $xmid - $q; $x2 = $xmid + $q;
    $y1 = $ymid - $q; $y2 = $ymid + $q;
  }

  if   ($orient eq 'S'){$vx1=$x1;$vy1=$y1;$vx2=$x2;$vy2=$y1;$vx3=$xmid;$vy3=$y2;}
  elsif($orient eq 'N'){$vx1=$x1;$vy1=$y2;$vx2=$x2;$vy2=$y2;$vx3=$xmid;$vy3=$y1;}
  elsif($orient eq 'W'){$vx1=$x2;$vy1=$y1;$vx2=$x2;$vy2=$y2;$vx3=$x2-$q*2;$vy3=$ymid;}
  elsif($orient eq 'E'){$vx1=$x1;$vy1=$y1;$vx2=$x1;$vy2=$y2;$vx3=$x1+$q*2;$vy3=$ymid;}

  # now draw the triangle
  my $poly_pkg = $self->polygon_package;
  my $poly     = $poly_pkg->new();
  $poly->addPt($vx1,$vy1);
  $poly->addPt($vx2,$vy2);
  $poly->addPt($vx3,$vy3);

  if (my $c = $self->bgcolor){
    $gd->filledPolygon($poly,$c);
  }
  $gd->polygon($poly,$fg);
}

1;

__END__

=head1 NAME

Bio::Graphics::Glyph::triangle - The "triangle" glyph

=head1 SYNOPSIS

  See L<Bio::Graphics::Panel> and L<Bio::Graphics::Glyph>.

=head1 DESCRIPTION

This glyph draws an equilateral triangle when -point is defined.
It draws an isoceles triangle otherwise.  It is possible to draw
the triangle with the base on the N, S, E, or W side.

=head2 OPTIONS

In addition to the common options, the following glyph-specific
options are recognized:

  Option      Description                  Default
  ------      -----------                  -------

  -point      If true, the triangle         0
              will drawn at the center
              of the range, and not scaled
              to the feature width.

  -orient     On which side shall the       S
              base be? (NSEW)

=head1 BUGS

Please report them.

=head1 SEE ALSO

L<Bio::Graphics::Panel>,
L<Bio::Graphics::Glyph>,
L<Bio::Graphics::Glyph::arrow>,
L<Bio::Graphics::Glyph::cds>,
L<Bio::Graphics::Glyph::crossbox>,
L<Bio::Graphics::Glyph::diamond>,
L<Bio::Graphics::Glyph::dna>,
L<Bio::Graphics::Glyph::dot>,
L<Bio::Graphics::Glyph::ellipse>,
L<Bio::Graphics::Glyph::extending_arrow>,
L<Bio::Graphics::Glyph::generic>,
L<Bio::Graphics::Glyph::graded_segments>,
L<Bio::Graphics::Glyph::heterogeneous_segments>,
L<Bio::Graphics::Glyph::line>,
L<Bio::Graphics::Glyph::pinsertion>,
L<Bio::Graphics::Glyph::primers>,
L<Bio::Graphics::Glyph::rndrect>,
L<Bio::Graphics::Glyph::segments>,
L<Bio::Graphics::Glyph::ruler_arrow>,
L<Bio::Graphics::Glyph::toomany>,
L<Bio::Graphics::Glyph::transcript>,
L<Bio::Graphics::Glyph::transcript2>,
L<Bio::Graphics::Glyph::translation>,
L<Bio::Graphics::Glyph::triangle>,
L<Bio::DB::GFF>,
L<Bio::SeqI>,
L<Bio::SeqFeatureI>,
L<Bio::Das>,
L<GD>

=head1 AUTHOR

Allen Day E<lt>day@cshl.orgE<gt>.

Copyright (c) 2001 Cold Spring Harbor Laboratory

This library is free software; you can redistribute it and/or modify
it under the same terms as Perl itself.  See DISCLAIMER.txt for
disclaimers of warranty.

=cut