1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
|
bin/bamToGBrowse.pl
bin/chrom_sizes.pl
bin/genomeCoverageBed.pl
Build.PL
c_bin/bam2bedgraph.c
c_bin/makefile
Changes
DISCLAIMER
INSTALL.pl
lib/Bio/DB/Bam/Alignment.pm
lib/Bio/DB/Bam/AlignWrapper.pm
lib/Bio/DB/Bam/FetchIterator.pm
lib/Bio/DB/Bam/Pileup.pm
lib/Bio/DB/Bam/PileupWrapper.pm
lib/Bio/DB/Bam/Query.pm
lib/Bio/DB/Bam/ReadIterator.pm
lib/Bio/DB/Bam/Target.pm
lib/Bio/DB/Sam.pm
lib/Bio/DB/Sam.xs
lib/Bio/DB/Sam/Constants.pm
lib/Bio/DB/Sam/SamToGBrowse.pm
lib/Bio/DB/Sam/Segment.pm
LICENSE
MANIFEST This list of files
META.json
META.yml
README
t/01sam.t
t/data/00README.txt
t/data/dm3_3R_4766911_4767130.sam
t/data/dm3_3R_4766911_4767130.sam.bam
t/data/dm3_3R_4766911_4767130.sam.sorted.bam
t/data/ex1.bam
t/data/ex1.fa
t/data/ex1.sam.gz
t/data/ex2.bam
t/data/ex2.sam.gz
typemap
|
