1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109
|
# This file was automatically generated by Dist::Zilla::Plugin::MakeMaker v6.012.
use strict;
use warnings;
# inserted by Dist::Zilla::Plugin::CheckBin 0.008
use Devel::CheckBin;
check_bin('basemlg');
check_bin('codeml');
check_bin('paml-evolver');
check_bin('yn00');
use 5.006;
use ExtUtils::MakeMaker;
my %WriteMakefileArgs = (
"ABSTRACT" => "Parses output from the PAML programs codeml, baseml, basemlg, codemlsites and yn00",
"AUTHOR" => "Aaron J Mackey <amackey\@bioperl.org>, Jason Stajich <jason\@bioperl.org>",
"CONFIGURE_REQUIRES" => {
"Devel::CheckBin" => 0,
"ExtUtils::MakeMaker" => 0
},
"DISTNAME" => "Bio-Tools-Phylo-PAML",
"EXE_FILES" => [
"bin/bp_pairwise_kaks"
],
"LICENSE" => "perl",
"MIN_PERL_VERSION" => "5.006",
"NAME" => "Bio::Tools::Phylo::PAML",
"PREREQ_PM" => {
"Bio::Align::Utilities" => 0,
"Bio::AlignIO" => 0,
"Bio::AnalysisParserI" => 0,
"Bio::AnalysisResultI" => 0,
"Bio::LocatableSeq" => 0,
"Bio::Matrix::PhylipDist" => 0,
"Bio::PrimarySeq" => 0,
"Bio::Root::IO" => 0,
"Bio::Root::Root" => 0,
"Bio::SeqIO" => 0,
"Bio::Tools::Run::Alignment::Clustalw" => 0,
"Bio::Tools::Run::Alignment::TCoffee" => 0,
"Bio::Tools::Run::Phylo::PhyloBase" => 0,
"Bio::Tools::Run::WrapperBase" => 0,
"Bio::TreeIO" => 0,
"Cwd" => 0,
"File::Spec" => 0,
"Getopt::Long" => 0,
"IO::String" => 0,
"base" => 0,
"strict" => 0,
"utf8" => 0,
"vars" => 0,
"warnings" => 0
},
"TEST_REQUIRES" => {
"File::Spec" => 0,
"IO::Handle" => 0,
"IPC::Open3" => 0,
"Test::More" => 0
},
"VERSION" => "1.7.3",
"test" => {
"TESTS" => "t/*.t"
}
);
my %FallbackPrereqs = (
"Bio::Align::Utilities" => 0,
"Bio::AlignIO" => 0,
"Bio::AnalysisParserI" => 0,
"Bio::AnalysisResultI" => 0,
"Bio::LocatableSeq" => 0,
"Bio::Matrix::PhylipDist" => 0,
"Bio::PrimarySeq" => 0,
"Bio::Root::IO" => 0,
"Bio::Root::Root" => 0,
"Bio::SeqIO" => 0,
"Bio::Tools::Run::Alignment::Clustalw" => 0,
"Bio::Tools::Run::Alignment::TCoffee" => 0,
"Bio::Tools::Run::Phylo::PhyloBase" => 0,
"Bio::Tools::Run::WrapperBase" => 0,
"Bio::TreeIO" => 0,
"Cwd" => 0,
"File::Spec" => 0,
"Getopt::Long" => 0,
"IO::Handle" => 0,
"IO::String" => 0,
"IPC::Open3" => 0,
"Test::More" => 0,
"base" => 0,
"strict" => 0,
"utf8" => 0,
"vars" => 0,
"warnings" => 0
);
unless ( eval { ExtUtils::MakeMaker->VERSION(6.63_03) } ) {
delete $WriteMakefileArgs{TEST_REQUIRES};
delete $WriteMakefileArgs{BUILD_REQUIRES};
$WriteMakefileArgs{PREREQ_PM} = \%FallbackPrereqs;
}
delete $WriteMakefileArgs{CONFIGURE_REQUIRES}
unless eval { ExtUtils::MakeMaker->VERSION(6.52) };
WriteMakefile(%WriteMakefileArgs);
|