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C
C dna_output.f: write output for the DNA project
C Copyright (C) 2004 CCLRC, Graeme Winter
C
C This library is free software: you can redistribute it and/or
C modify it under the terms of the GNU Lesser General Public License
C version 3, modified in accordance with the provisions of the
C license to address the requirements of UK law.
C
C You should have received a copy of the modified GNU Lesser General
C Public License along with this library. If not, copies may be
C downloaded from http://www.ccp4.ac.uk/ccp4license.php
C
C This program is distributed in the hope that it will be useful,
C but WITHOUT ANY WARRANTY; without even the implied warranty of
C MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
C GNU Lesser General Public License for more details.
C
c dna_output.f
c maintained by G.Winter
c "standard" DNA output XML subroutines for
c fortran programs - these will create named tables, lists and items
c
c tables containeth lists, which in turn containeth items.
c
c These may be applied to programs other than Mosflm - so long
c as I can code up a clever way of handling this output!
c
c
c
c
c
c $Id$
c
c set no output flag - this is the alternative to starting the output
c and should be called for good form - an alternative would be to
c call dna_start with filename = ' ' - which I could interpret
c appropriately
subroutine dna_set_no_output
implicit none
include 'dna_header.fh'
dnaout = .false.
return
end
c
c start writing the dna output - this takes a program name,
c for instance 'mosflm' - this should be called as soon as
c the file is opened
c
subroutine dna_start(filename, progname)
implicit none
include 'dna_header.fh'
character*(*) progname, filename
integer ifail, lenstr
external lenstr
dnainlist = .false.
dnaintable = .false.
dna_image = ' '
ifail = 1
call ccpdpn(dnafd, filename, 'UNKNOWN', 'F' ,0 , ifail)
if (ifail.ne.1) then
call ccperr(2, 'dna_start: error opening file')
dnaout = .false.
else
dnaout = .true.
endif
1 format('<?xml version="1.0"?><!DOCTYPE dna_tables>')
2 format('<dna_tables program="', a, '">')
if(dnaout) write(dnafd, 1)
if(dnaout) write(dnafd, 2) progname(1:lenstr(progname))
return
end
c
c finish writing dna output - this should go at the end of the
c program
c
subroutine dna_end
implicit none
include 'dna_header.fh'
1 format('</dna_tables>')
c close any ongoing tables
if (dnainlist) call dna_list_end
if (dnaintable) call dna_table_end
if(dnaout) write(dnafd, 1)
if(dnaout) close(dnafd)
dnaout = .false.
return
end
c
c write an item containing a "real"
c
subroutine dna_real_item(name, value)
implicit none
include 'dna_header.fh'
character *(*) name
real value
integer lenstr
external lenstr
1 format(' <item name="', a, '">', e15.6, '</item>')
if(dnaout) write(dnafd, 1) name(1:lenstr(name)), value
return
end
subroutine dna_double_item(name, value)
implicit none
include 'dna_header.fh'
character *(*) name
double precision value
integer lenstr
external lenstr
1 format(' <item name="', a, '">', e15.6, '</item>')
if(dnaout) write(dnafd, 1) name(1:lenstr(name)), value
return
end
c
c as above sed 's/real/integer/'
c
subroutine dna_integer_item(name, value)
implicit none
include 'dna_header.fh'
character *(*) name
integer value, lenstr
external lenstr
1 format(' <item name="', a, '">', i15, '</item>')
if(dnaout) write(dnafd, 1) name(1:lenstr(name)), value
return
end
c
c as above sed 's/real/character*(*)/'
c
subroutine dna_character_item(name, value)
implicit none
include 'dna_header.fh'
character *(*) name
character *(*) value
integer lenstr
external lenstr
1 format(' <item name="', a, '">', a, '</item>')
if(dnaout) write(dnafd, 1) name(1:lenstr(name)), value
return
end
c
c start a named list
c
subroutine dna_list_start(name)
implicit none
include 'dna_header.fh'
character *(*) name
1 format(' <list name="', a, '">')
c check that we are not already in a list, and if we are
c close it!
if (dnainlist) call dna_list_end
dnainlist = .true.
if(dnaout) write(dnafd, 1) name
return
end
subroutine dna_ilist_start(name, index)
c this is the same as the above but with an integer index
c so that you can have any lists with the same name - very
c important for tabular output.
implicit none
include 'dna_header.fh'
character *(*) name
integer index
1 format(' <list name="', a, '" index="', i5, '">')
c check that we are not already in a list, and if we are
c close it!
if (dnainlist) call dna_list_end
dnainlist = .true.
if(dnaout) write(dnafd, 1) name, index
return
end
c
c finish a named list
c
subroutine dna_list_end
implicit none
include 'dna_header.fh'
1 format(' </list>')
c check that we are in a list
if (dnainlist) then
if(dnaout) write(dnafd, 1)
end if
dnainlist = .false.
return
end
c
c start a named table
c
subroutine dna_table_start(name)
implicit none
include 'dna_header.fh'
character *(*) name
integer lenstr
external lenstr
1 format(' <table name="', a, '" image="', a, '">')
2 format(' <table name="', a, '">')
c check that we are not already inside a table
if (dnaintable) call dna_table_end
dnaintable = .true.
if (dna_image .eq. ' ') then
if(dnaout) write(dnafd, 2) name(1:lenstr(name))
else
if(dnaout) write(dnafd, 1) name(1:lenstr(name)),
+ dna_image(1:lenstr(dna_image))
end if
return
end
c
c finish a named table
c
subroutine dna_table_end
implicit none
include 'dna_header.fh'
1 format(' </table>')
c check we are not still inside a list
if (dnainlist) then
call dna_list_end
end if
if (dnaintable) then
if(dnaout) write(dnafd, 1)
end if
dnaintable = .false.
return
end
subroutine dna_error(message)
implicit none
character*(*) message
integer lenstr
external lenstr
call dna_table_start('error')
call dna_list_start('error')
call dna_character_item('message', message(1:lenstr(message)))
call dna_list_end
call dna_table_end
return
end
subroutine dna_warning(message)
implicit none
character*(*) message
integer lenstr
external lenstr
call dna_table_start('warning')
call dna_list_start('warning')
call dna_character_item('message', message(1:lenstr(message)))
call dna_list_end
call dna_table_end
return
end
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