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C
C parser.f: wrappers and utilies for C parser functions
C
C This library is free software: you can redistribute it and/or
C modify it under the terms of the GNU Lesser General Public License
C version 3, modified in accordance with the provisions of the
C license to address the requirements of UK law.
C
C You should have received a copy of the modified GNU Lesser General
C Public License along with this library. If not, copies may be
C downloaded from http://www.ccp4.ac.uk/ccp4license.php
C
C This program is distributed in the hope that it will be useful,
C but WITHOUT ANY WARRANTY; without even the implied warranty of
C MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
C GNU Lesser General Public License for more details.
C
C CCP4 PARSER Routines
C ====================
C
C Original Author: Based on Mike Levitt's routine of the same name.
C Modified By: Peter Brick, Phil Evans, Eleanor Dodson, Dave Love
C
C Martyn Winn: legacy routines retained here. PARSER, PARSE and PARSDL
C are now wrappers to C functions.
C
C Library parser.f contains the following subroutines and functions,
C some of which are currently unsued and commented out.
C
C SUBROUTINES
C
C KEYNUM(N,NSTART,LINE,IBEG,IEND,ITYP,NTOK)
C [ KEYERR(I,MODE,LINE,IBEG,IEND,ITYP) ] - internal subroutine (KEYNUM)
C GTNREA(N,M,X,NTOK,ITYP,FVALUE)
C GTNINT(N,M,J,NTOK,ITYP,FVALUE)
C GTPREA(N,X,NTOK,ITYP,FVALUE)
C GTPINT(N,I,NTOK,ITYP,FVALUE)
C SBLANK(ARRAY,N1,N2)
C CHKKEY(KEY,WORDS,NWORDS,IKEY)
C PUTLIN(STROUT,OUTWIN)
C BLANK(OUTWIN,NLINES)
C LERROR(ERRFLG,IFAIL,ERRMSG)
C RDSYMM(JTOK,LINE,IBEG,IEND,ITYP,FVALUE,NTOK,SPGNAM,NUMSGP,PGNAME,
C NSYM,NSYMP,RSYM)
C RDHEAD(JTOK,LINE,IBEG,IEND,ITYP,FVALUE,NTOK,MTZPRT,MTZBPR)
C RDCELL(ITOK,ITYPE,FVALUE,NTOK,CELL)
C RDRESO(ITOK,ITYPE,FVALUE,NTOK,RESMIN,RESMAX,SMIN,SMAX)
C RDSCAL(ITOK,LINE,IBEG,IEND,ITYP,FVALUE,NTOK,NLPRGI,LSPRGI,ILPRGI,SCAL,BB)
C RDRESL(ITOK,ITYPE,FVALUE,CVALUE,NTOK,RESMIN,RESMAX,SMIN,SMAX,ISTAT)
C RDATOMSELECT(JTOK,INAT0,INAT1,IRES0,IRES1,CHNAM,IMODE,NTOK,LINE,IBEG,
C IEND,ITYP,IDEC,FVALUE,IFAIL)
C GTTREA(N,X,LFLAG,NTOK,ITYP,FVALUE)
C GTTINT(N,I,LFLAG,NTOK,ITYP,FVALUE)
C
C FUNCTIONS
C
C LOGICAL FUNCTION CMATCH(STRING1,STRING2,NCHAR)
C
C_BEGIN_INTRO
C CCP4 PARSER Routines
C ====================
C
C The PARSER module of the CCP4 library contains routines which are
C mainly used for `free-format' `keyworded' input of control data for
C programs. Most programs have a loop over input records which are
C initially fed to the routine PARSER to tokenise them and extract the
C initial keyword. PARSER can cope with continued, commented input
C lines and included files. It calls PARSE to tokenise individual
C records and PARSE is sometimes useful itself to compensate for the
C lack of free-format internal READs in the fortran77 standard. See
C the entries below for details.
C
C The library also contains routines to decode the parameters
C following the `standard' program keywords SYMMETRY, RESOLUTION,
C SCALE and CELL and to extract real and integer numbers from fields.
C
C_END_INTRO
C
C
C_BEGIN_KEYNUM
C ====================================================
SUBROUTINE KEYNUM(N,NSTART,LINE,IBEG,IEND,ITYP,NTOK)
C ====================================================
C Check that correct number of numbers (numeric fields) are present
C
C--- Arguments:
C
C N (I) INTEGER Number of consecutive numeric fields expected
C
C NSTART (I) INTEGER Number of first field to check
C
C LINE (I) CHARACTER*(*) Array containing the fields
C
C IBEG (I) INTEGER(*) First column number of fields (from PARSER)
C
C IEND (I) INTEGER(*) Last column number of fields (from PARSER)
C
C ITYP (I) INTEGER(*) =0 null field
C =1 character string
C =2 number
C (from PARSER)
C
C NTOK (I) INTEGER Number of fields (from PARSER)
C
C_END_KEYNUM
C
C .. Scalar Arguments ..
INTEGER N,NSTART,NTOK
CHARACTER LINE*(*)
C ..
C .. Array Arguments ..
INTEGER IBEG(*),IEND(*),ITYP(*)
C ..
C .. Local Scalars ..
INTEGER I
CHARACTER LINERR*200
C ..
C .. External Subroutines ..
EXTERNAL KEYERR, CCPERR
C ..
C
DO 10 I = NSTART,NSTART + N - 1
IF (I.GT.NTOK) THEN
GO TO 30
ELSE IF (ITYP(I).NE.2) THEN
GO TO 20
END IF
10 CONTINUE
C
RETURN
C
C *******************************
20 CALL KEYERR(I,2,LINE,IBEG,IEND,ITYP)
C *******************************
C
CALL CCPERR(1, 'Keyword error')
30 CONTINUE
C
WRITE (LINERR,FMT='(A,I4,A,I4,A)')
+ ' *** TOO FEW NUMBERS - ', (I - NSTART),
+ ' FOUND WHEN ',N,' EXPECTED'
CALL CCPERR(1, LINERR)
C
END
C
SUBROUTINE KEYERR(I,MODE,LINE,IBEG,IEND,ITYP)
C =============================================
C Print warning when token not of correct type.
C Internal subroutine, called from KEYNUM.
C
C .. Scalar Arguments ..
INTEGER I,MODE
CHARACTER LINE*(*)
C ..
C .. Array Arguments ..
INTEGER IBEG(*),IEND(*),ITYP(*)
C ..
C .. Local Arrays ..
CHARACTER TYPE(3)*12
C ..
C .. Local Scalars ..
CHARACTER LINERR*150
C ..
C .. External Subroutines ..
EXTERNAL LERROR
C ..
C .. Data statements ..
DATA TYPE/'alphanumeric','numeric ',
+ 'quoted '/
C ..
C
C
IF (MODE.EQ.0) THEN
WRITE (LINERR,FMT='(A,A,A)')
+ ' ** ERROR : Key word < ',
+ LINE(IBEG(I) : IEND(I)),
+ ' > not recognized and has therefore been ignored'
C
C ****************************
CALL LERROR(1,0,LINERR)
C ****************************
C
ELSE
WRITE (LINERR,FMT='(A,A,A,A,A,A,A)')
+ ' ** ERROR: Token < ',
+ LINE(IBEG(I) : IEND(I)),
+ ' > is ',
+ TYPE(ITYP(I)),
+ ' while a ',TYPE(I),' token was expected'
C
C ****************************
CALL LERROR(1,0,LINERR)
C ****************************
END IF
C
END
C
C_BEGIN_GTNREA
C ========================================
SUBROUTINE GTNREA(N,M,X,NTOK,ITYP,FVALUE)
C ========================================
C Extract M real numbers X starting from N'th value of Parser
C array FVALUE, if possible. If no value, X = 0.0 .
C If illegal, write message.
C
C--- Arguments:
C
C N (I) INTEGER Number of 1st element of FVALUE to be extracted
C
C M (I) INTEGER Number of elements to be extracted
C
C X (O) REAL(M) Put extracted elements into this array
C
C NTOK (I) INTEGER Total number of fields (from PARSER)
C
C ITYP (I) INTEGER(*) =0 null field
C =1 character string
C =2 number
C
C FVALUE (I) REAL(*) Array of numbers to be extracted (from PARSER)
C
C_END_GTNREA
C
C .. Scalar Arguments ..
INTEGER M,N,NTOK
C ..
C .. Array Arguments ..
INTEGER ITYP(*)
REAL X(M),FVALUE(*)
C ..
C .. Local Scalars ..
INTEGER I,K
CHARACTER LINERR*100
C ..
C .. External Subroutines ..
EXTERNAL LERROR
C ..
C
DO 10 I = 1,M
K = I + N - 1
X(I) = 0.0
C
IF (K.LE.NTOK) THEN
IF (ITYP(K).EQ.2) THEN
X(I) = FVALUE(K)
ELSE IF (ITYP(K).EQ.1) THEN
WRITE (LINERR,FMT='(A,I4)')
+ ' Illegal number in field ',K
C
C ****************************
CALL LERROR(1,0,LINERR)
C ****************************
C
END IF
END IF
10 CONTINUE
END
C
C_BEGIN_GTNINT
C ========================================
SUBROUTINE GTNINT(N,M,J,NTOK,ITYP,FVALUE)
C ========================================
C Extract M integers J starting from N'th value of Parser array FVALUE,
C if possible. If no value, J = 0 . If illegal, write message
C
C--- Arguments:
C
C N (I) INTEGER Number of 1st element of FVALUE to be extracted
C
C M (I) INTEGER Number of elements to be extracted
C
C J (O) INTEGER(M) Put extracted elements into this array
C
C NTOK (I) INTEGER Total number of fields (from PARSER)
C
C ITYP (I) INTEGER(*) =0 null field
C =1 character string
C =2 number
C
C FVALUE (I) REAL(*) Array of numbers to be extracted (from PARSER)
C
C_END_GTNINT
C
C .. Scalar Arguments ..
INTEGER M,N,NTOK
C ..
C .. Array Arguments ..
INTEGER J(M),ITYP(*)
REAL FVALUE(*)
C ..
C .. Local Scalars ..
INTEGER I,K
CHARACTER LINERR*200
C ..
C .. Intrinsic Functions ..
INTRINSIC NINT
C ..
C .. External Subroutines ..
EXTERNAL LERROR
C ..
C
DO 10 I = 1,M
K = I + N - 1
J(I) = 0
IF (K.LE.NTOK) THEN
IF (ITYP(K).EQ.2) THEN
J(I) = NINT(FVALUE(K))
ELSE IF (ITYP(K).EQ.1) THEN
WRITE (LINERR,FMT='(A,I4)')
+ ' Illegal number in field ',K
C
C ****************************
CALL LERROR(1,0,LINERR)
C ****************************
C
END IF
END IF
10 CONTINUE
C
END
C
C_BEGIN_GTPREA
C ======================================
SUBROUTINE GTPREA(N,X,NTOK,ITYP,FVALUE)
C ======================================
C Extract real number X from N'th value Parser array FVALUE, if possible
C If no value, leave X unchanged. If illegal, write message
C
C--- Arguments:
C
C N (I) INTEGER Number of 1st element of FVALUE to be extracted
C
C X (O) REAL Extracted number put here
C
C NTOK (I) INTEGER Total number of fields (from PARSER)
C
C ITYP (I) INTEGER(*) =0 null field
C =1 character string
C =2 number
C
C FVALUE (I) REAL(*) Array of numbers to be extracted (from PARSER)
C
C_END_GTPREA
C
C .. Scalar Arguments ..
REAL X
INTEGER N,NTOK
C ..
C .. Array arguments ..
REAL FVALUE(*)
INTEGER ITYP(*)
C ..
C .. Local Scalars ..
CHARACTER LINERR*200
C ..
C .. External Subroutines ..
EXTERNAL LERROR
C ..
C
IF (N.LE.NTOK) THEN
IF (ITYP(N).EQ.2) THEN
X = FVALUE(N)
ELSE IF (ITYP(N).EQ.1) THEN
WRITE (LINERR,FMT='(A,I4)')
+ ' Illegal number in field ',N
C
C ****************************
CALL LERROR(1,0,LINERR)
C ****************************
C
END IF
ELSE
CALL LERROR (1, 0, 'Real number expected at end of line')
END IF
C
END
C
C_BEGIN_GTPINT
C ======================================
SUBROUTINE GTPINT(N,I,NTOK,ITYP,FVALUE)
C ======================================
C Extract integer I from N'th value Parser array FVALUE, if possible
C If no value, leave I unchanged. If illegal, write message
C
C--- Arguments:
C
C N (I) INTEGER Number of 1st element of FVALUE to be extracted
C
C I (O) INTEGER Extracted number put here
C
C NTOK (I) INTEGER Total number of fields (from PARSER)
C
C ITYP (I) INTEGER(*) =0 null field
C =1 character string
C =2 number
C
C FVALUE (I) REAL(*) Array of numbers to be extracted (from PARSER)
C
C_END_GTPINT
C
C .. Scalar Arguments ..
INTEGER I,N,NTOK
C ..
C .. Arrays arguments ..
REAL FVALUE(*)
INTEGER ITYP(*)
C ..
C .. Local Scalars ..
INTEGER ISTERR,IFGERR
CHARACTER LINERR*100
C ..
C .. External Subroutines ..
EXTERNAL LERROR
C ..
C .. Intrinsic Functions ..
INTRINSIC NINT
C ..
C
IF (N.LE.NTOK) THEN
IF (ITYP(N).EQ.2) THEN
I = NINT(FVALUE(N))
ELSE IF (ITYP(N).EQ.1) THEN
WRITE (LINERR,FMT='(A,I4)')
+ ' Illegal number in field ',N
ISTERR = 1
IFGERR = 0
C
C ****************************
CALL LERROR(ISTERR,IFGERR,LINERR)
C ****************************
C
END IF
END IF
C
END
C
C_BEGIN_SBLANK
C ==============================
SUBROUTINE SBLANK(ARRAY,N1,N2)
C ==============================
C Blank characters N1 to N2 of ARRAY
C
C--- Arguments:
C
C ARRAY (I/O) CHARACTER(*)
C
C N1 (I) INTEGER
C
C N2 (I) INTEGER
C
C_END_SBLANK
C
CHARACTER*1 ARRAY(*)
INTEGER I,N1,N2
C
DO 10 I=N1,N2
ARRAY(I)=' '
10 CONTINUE
C
RETURN
END
C
C_BEGIN_CMATCH
C ==============================================
LOGICAL FUNCTION CMATCH(STRING1,STRING2,NCHAR)
C ==============================================
C
C---- Compare nchar character in string1 and string2
C return cmatch .true. if all match, else .false.
C
C---- Arguments:
C
C STRING1 (I) CHARACTER*(*) 1st string to compare
C
C STRING2 (I) CHARACTER*(*) 2nd string to compare
C
C NCHAR (I) INTEGER number of characters to compare
C
C_END_CMATCH
C
CHARACTER*(*) STRING1,STRING2
INTEGER NCHAR
C
IF(STRING1(1:NCHAR).EQ.STRING2(1:NCHAR)) THEN
CMATCH=.TRUE.
ELSE
CMATCH=.FALSE.
ENDIF
END
C
C_BEGIN_CHKKEY
C ========================================
SUBROUTINE CHKKEY(KEY,WORDS,NWORDS,IKEY)
C ========================================
C Check keyword KEY against list of NWORDS possible keywords in WORDS.
C Allows abbreviated or extended keys provided they are not ambiguous.
C
C---- Arguments:
C
C KEY (I) CHARACTER*(*) Keyword for checking
C
C WORDS (I) CHARACTER(NWORDS)*(*) List of possible keywords
C
C NWORDS (I) INTEGER Number of keywords in WORDS
C
C IKEY (I/O) INTEGER = '?', list all words
C Returns:
C = keyword number found (.gt.0)
C = 0 if not found or null
C = -1 if ambiguous
C
C_END_CHKKEY
C
INTEGER NFMAX
PARAMETER (NFMAX=20)
C .. Scalar Arguments ..
INTEGER NWORDS, IKEY
CHARACTER KEY*(*)
C ..
C .. Array Arguments ..
CHARACTER WORDS(NWORDS)*(*)
C ..
C .. Local Scalars ..
INTEGER LK,I,L,NFOUND,JDO
CHARACTER LINERR*200
C ..
C .. Local Arrays ..
INTEGER LFOUND(20)
C ..
C .. External Functions ..
INTEGER LENSTR
EXTERNAL LENSTR
C ..
C .. External Subroutines ..
EXTERNAL PUTLIN,LERROR
C ..
C
C---- Get minimum significant length of KEY
C ( function LENSTR returns the length
C of the character string excluding trailing blanks)
C
IKEY=0
C
C ***********
LK=LENSTR(KEY)
C ***********
C
C---- Ignore null string
C
IF(LK.LE.0) RETURN
C
IF(KEY(1:1).EQ.'?') THEN
C
C ****************
CALL PUTLIN(' Possible keywords are:','HLPWIN')
C ****************
C
DO 10 JDO = 1,NWORDS
C
C ****************
CALL PUTLIN(WORDS(JDO),'HLPWIN')
C ****************
C
10 CONTINUE
C
IKEY=0
RETURN
ENDIF
C
NFOUND=0
C
C---- Check all possible words in case of ambiguities
C
DO 20 I=1,NWORDS
C
C---- Key may be longer than word in list
C
C ****************
L=MIN(LK,LENSTR(WORDS(I)))
C ****************
C
IF(L.LE.0) GO TO 20
C
C---- Find out if KEY is an initial substring of this option word
C
IF(INDEX(WORDS(I),KEY(1:L)).EQ.1) THEN
NFOUND=NFOUND+1
C
IF(NFOUND.GT.NFMAX) THEN
WRITE (LINERR,FMT='(A,I5)')
+ ' CHKKEY: too many ambiguities : ',NFMAX
C
C ****************************
CALL LERROR(1,0,LINERR)
C ****************************
C
NFOUND=NFMAX
ELSE
LFOUND(NFOUND)=I
ENDIF
ENDIF
20 CONTINUE
C
C---- If keyword is ambiguous, list possibilities
C
IF(NFOUND.GT.1) THEN
WRITE (LINERR,FMT='(A,A,A)')
+ ' Keyword ',
+ KEY(1:LK),
+ ' is ambiguous: possibilities are -'
C
C ****************************
CALL LERROR(1,0,LINERR)
C ****************************
C
DO 30 JDO = 1,NWORDS
C
C ****************
CALL PUTLIN(WORDS(JDO),'HLPWIN')
C ****************
C
30 CONTINUE
IKEY=-1
ELSEIF (NFOUND.EQ.1) THEN
C
C---- Success if only 1 found
C
IKEY=LFOUND(1)
ENDIF
END
C
C_BEGIN_PUTLIN
C ================================
SUBROUTINE PUTLIN(STROUT,OUTWIN)
C ================================
C---- This is a dummy PUTLIN to link with the MTZ routines mark 1 -
C all it does is write the line in STROUT to lun 6. Later the
C routines will be linked with the Compose-Parser etc. from Kim
C where PUTLIN does a few more things !
C
C---- Arguments:
C
C STROUT (I) CHARACTER*(*) Input line
C
C OUTWIN (O) CHARACTER*(*) Not used
C
C_END_PUTLIN
C
C .. Scalar Arguments ..
CHARACTER OUTWIN* (*)
CHARACTER STROUT* (*)
C ..
C .. Local Scalars ..
INTEGER LUNOUT,LL,LS,LX
C ..
C .. External Functions ..
INTEGER LENSTR
EXTERNAL LENSTR
C ..
C .. Data statements ..
DATA LUNOUT/6/
C ..
C
LL = LENSTR(STROUT)
IF (LL.GE.132) THEN
LX = 1
LS = 131
10 CONTINUE
WRITE (LUNOUT,FMT=6000) STROUT(LX:LS)
IF (LS.EQ.LL) GOTO 20
LX = LS + 1
LS = LS + 130
IF (LS.GT.LL) LS = LL
GO TO 10
ELSE
IF (LL.EQ.0) THEN
WRITE(LUNOUT,FMT=6000)
ELSE
WRITE (LUNOUT,FMT=6000) STROUT(1:LL)
END IF
END IF
20 CONTINUE
C
C---- Format statements
C
6000 FORMAT (' ',A)
C
END
C
C_BEGIN_BLANK
C ===============================
SUBROUTINE BLANK(OUTWIN,NLINES)
C ===============================
C---- This subroutine calls PUTLIN to output NLINES blank lines to the
C window OUTWIN
C
C---- Arguments:
C
C OUTWIN (I) CHARACTER*6 output window
C
C NLINES (I) INTEGER number of blank lines to output
C
C_END_BLANK
C
C .. Scalar Arguments ..
INTEGER NLINES
CHARACTER OUTWIN*(*)
C ..
C .. Local Scalars ..
INTEGER JDO10
C ..
C .. External Subroutines ..
EXTERNAL PUTLIN
C ..
C
DO 10 JDO10 = 1,MAX(NLINES,1)
C
C **************
CALL PUTLIN(' ',OUTWIN)
C **************
C
10 CONTINUE
END
C
C_BEGIN_LERROR
C =======================================
SUBROUTINE LERROR(ERRFLG,IFAIL,ERRMSG)
C =======================================
C---- General error reporting subroutine, for the MTZ routines, etc
C
C---- Arguments:
C
C ERRFLG (I) INTEGER =1 output meesage as warning
C =2 output message as fatal
C
C IFAIL (I) INTEGER =0 return after fatal error
C =-1 STOP after reporting fatal error
C
C ERRMSG (I) CHARACTER*(*) character string containing error
C message to output
C
C_END_LERROR
C
C .. Scalar Arguments ..
INTEGER ERRFLG,IFAIL
CHARACTER ERRMSG* (*)
C ..
C ..
C .. External Subroutines ..
EXTERNAL BLANK,PUTLIN
C ..
C
IF (ERRFLG.EQ.1) THEN
C
C---- Output a warning message and return
C
CALL BLANK('ERRWIN',1)
CALL PUTLIN('*** Warning','ERRWIN')
CALL PUTLIN(ERRMSG,'ERRWIN')
CALL BLANK('ERRWIN',1)
C
ELSE IF (ERRFLG.EQ.2) THEN
C
C---- Output a fatal message, and quit or return depending on IFAIL
C
CALL BLANK('ERRWIN',1)
CALL PUTLIN('*** Error','ERRWIN')
CALL PUTLIN(ERRMSG,'ERRWIN')
IF (IFAIL.LT.0) THEN
call ccperr(1,'*** Program Terminated ')
ELSE
CALL BLANK('ERRWIN',1)
END IF
RETURN
ELSE
C
C---- Bad errflg, output message and continue
C
CALL BLANK('ERRWIN',1)
CALL PUTLIN('*** Unrecognised error','ERRWIN')
CALL PUTLIN(ERRMSG,'ERRWIN')
CALL PUTLIN('Program continuing ...','ERRWIN')
CALL BLANK('ERRWIN',1)
C
END IF
END
C
C
C_BEGIN_RDSYMM
C =======================================================
SUBROUTINE RDSYMM(JTOK,LINE,IBEG,IEND,ITYP,FVALUE,NTOK,
. SPGNAM,NUMSGP,PGNAME,NSYM,NSYMP,RSYM)
C =======================================================
C---- Read and decode symmetry specification
C
C---- Arguments:
C
C JTOK (I) INTEGER Number of first field to interpret
C
C LINE (I) CHARACTER*(*) Input string (from PARSER)
C
C IBEG (I) INTEGER(*) 1st column number of tokens in field
C (from PARSER)
C
C IEND (I) INTEGER(*) Last column number of tokens in field
C (from PARSER)
C
C ITYP (I) INTEGER(*) =0 null field
C =1 character string
C =2 number
C (from PARSER)
C
C FVALUE (I) REAL(*) Array of numbers. (from PARSER)
C
C NTOK (I) INTEGER The number of fields parsed. (from PARSER)
C
C
C NSYM (I/O) INTEGER Number of symmetry operations already read,
C including non-primitive.
C (should be cleared to 0 at beginning)
C
C SPGNAM (I/O) CHARACTER*(*) Space group name
C
C NUMSGP (O) INTEGER Space group number
C
C PGNAME (O) CHARACTER*(*) Point group name
C
C NSYMP (O) INTEGER Number of primitive symmetry operations
C
C RSYM (O) REAL(4,4,*) Symmetry matrices. * should be at least =NSYM
C
C_END_RDSYMM
C
INTEGER JTOK,NTOK
INTEGER IBEG(*),IEND(*),ITYP(*)
REAL FVALUE(*)
CHARACTER*(*)LINE,SPGNAM,PGNAME
CHARACTER*20 SPGNAMS
INTEGER NUMSGP,NSYM,NSYMP,LENSTR
EXTERNAL LENSTR
REAL RSYM(4,4,*)
C
C---- Look at next field on line: this can be
C (a) a space-group number
C (b) a space-group name, ie a string beginning P,I,R,F,A,B or C
C (c) a symmetry operation (anything else)
C
C---- for cases (a) & (b), this is a single field:
C case (c) is more than 1 field
C
SPGNAMS = ' '
SPGNAM = ' '
IF (JTOK.GT.NTOK) THEN
CALL PUTLIN(' No symmetry data !!!','CURWIN')
ELSE
IF (JTOK.EQ.NTOK) THEN
IF (NSYM.GT.0) THEN
CALL PUTLIN('Warning: symmetry already given','CURWIN')
ENDIF
C
C---- A single field, see if it is a number or a string
C
IF (ITYP(JTOK).EQ.2) THEN
C
C---- it's a number, treat as space-group number
C
NUMSGP = NINT(FVALUE(JTOK))
ELSE
C
C---- it's a string, treat as space-group name
C
SPGNAM = LINE(IBEG(JTOK) :IEND(JTOK))
CALL CCPUPC(SPGNAM)
IF (SPGNAM(1:1).EQ.'R' .AND.
+ INDEX(SPGNAM,':H').LE.0) THEN
WRITE(6,'(A,A)') 'Warning: rhombohedral axes implied',
+ ' - if you have hexagonal axes then use H'
ENDIF
NUMSGP = 0
END IF
C
C---- Read symmetry (all operations) from SYMOP
C open symop on channel 24 - closed at end of reading
C NSYMP returns number of primitive operations
C
C CALL MSYMLB(24,NUMSGP,SPGNAM,PGNAME,NSYMP,NSYM,RSYM)
nsymp = 0
nsym = 0
CALL MSYMLB3(24,NUMSGP,SPGNAM,SPGNAMS,PGNAME,NSYMP,NSYM,
+ RSYM)
ELSE
C
C
C---- Read symmetry operations
C
NSYM = NSYM + 1
NSYMP = NSYM
CALL CCPUPC(LINE)
CALL SYMFR2(LINE,IBEG(JTOK),NSYM,RSYM)
NUMSGP = 0
PGNAME = ' '
C
END IF
END IF
END
C
C_BEGIN_RDHEAD
C ======================================================
SUBROUTINE RDHEAD(JTOK,LINE,IBEG,IEND,ITYP,FVALUE,NTOK,
. MTZPRT,MTZBPR)
C ======================================================
C---- Read and decode HEADER command, to set print flags for MTZ headers
C
C---- Arguments:
C
C JTOK (I) INTEGER Number of first field to interpret
C
C LINE (I) CHARACTER*(*) Input string (from PARSER)
C
C IBEG (I) INTEGER(*) 1st column number of tokens in field
C (from PARSER)
C
C IEND (I) INTEGER(*) Last column number of tokens in field
C (from PARSER)
C
C ITYP (I) INTEGER(*) =0 null field
C =1 character string
C =2 number
C (from PARSER)
C
C FVALUE (I) REAL(*) Array of numbers. (from PARSER)
C
C NTOK (I) INTEGER The number of fields parsed. (from PARSER)
C
C
C MTZPRT (O) INTEGER Flag to control printout from MTZ file header
C NONE sets MTZPRT = 0
C no header o/p
C BRIEF sets MTZPRT = 1 (default)
C brief header o/p
C HISTORY sets MTZPRT = 2
C brief + mtz history
C ALL sets MTZPRT = 3
C full header o/p from mtz reads
C
C MTZBPR (O) INTEGER Controls printout from BATCH HEADERS
C NOBATCH sets MTZBPR = 0
C no batch header o/p
C BATCH sets MTZBPR = 1 (default)
C batch titles o/p
C ORIENTATION sets MTZBPR = 2
C batch orientation also
C
C_END_RDHEAD
C
INTEGER JTOK,NTOK
INTEGER IBEG(*),IEND(*),ITYP(*)
REAL FVALUE(*)
CHARACTER*(*) LINE
INTEGER MTZPRT,MTZBPR
C
C Locals
INTEGER I,IKEY
CHARACTER KEY*12
C
INTEGER NKEYS
PARAMETER (NKEYS=7)
CHARACTER*12 KEYS(NKEYS)
DATA KEYS/'NONE','BRIEF','HISTORY','ALL',
$ 'NOBATCH','BATCH','ORIENTATION'/
C
C Set defaults
MTZPRT = 1
MTZBPR = 1
C
C Loop keywords
IF (NTOK .GE. JTOK) THEN
DO 10, I=JTOK,NTOK
KEY = LINE(IBEG(I):IEND(I))
CALL CCPUPC(KEY)
CALL CHKKEY(KEY,KEYS,NKEYS,IKEY)
IF (IKEY .LE. 0) THEN
CALL PUTLIN
+ ('Unrecognized or ambiguous subkeyword to HEADER: '
+ // KEY,'CURWIN')
ELSE
IF (IKEY .EQ. 1) MTZPRT = 0
IF (IKEY .EQ. 2) MTZPRT = 1
IF (IKEY .EQ. 3) MTZPRT = 2
IF (IKEY .EQ. 4) MTZPRT = 3
IF (IKEY .EQ. 5) MTZBPR = 0
IF (IKEY .EQ. 6) MTZBPR = 1
IF (IKEY .EQ. 7) MTZBPR = 2
ENDIF
10 CONTINUE
ENDIF
END
C
C_BEGIN_RDCELL
C ==============================================
SUBROUTINE RDCELL(ITOK,ITYPE,FVALUE,NTOK,CELL)
C ==============================================
C---- Read and decode cell parameters
C
C---- Arguments:
C
C ITOK (I) INTEGER Number of first field to interpret
C
C ITYPE (I) INTEGER(*) =0 null field
C =1 character string
C =2 number
C (from PARSER)
C
C FVALUE (I) REAL(*) Array of numbers. (from PARSER)
C
C NTOK (I) INTEGER The number of fields parsed. (from PARSER)
C
C CELL (O) REAL(6) Cell parameters a, b, c, alpha, beta, gamma.
C
C_END_RDCELL
C
C .. Scalar Arguments ..
INTEGER ITOK,NTOK
C ..
C .. Array Arguments ..
REAL CELL(6),FVALUE(*)
INTEGER ITYPE(*)
C ..
C .. External Subroutines ..
EXTERNAL GTPREA
C ..
C
IF (NTOK .LT. ITOK+2) THEN
CALL LERROR (1,0,'Cell a, b and c not given -- ignored')
RETURN
END IF
CELL(4) = 90.0
CELL(5) = 90.0
CELL(6) = 90.0
C
C ***************************************
CALL GTPREA(ITOK,CELL(1),NTOK,ITYPE,FVALUE)
CALL GTPREA(ITOK+1,CELL(2),NTOK,ITYPE,FVALUE)
CALL GTPREA(ITOK+2,CELL(3),NTOK,ITYPE,FVALUE)
C ***************************************
C
C *********************************************
IF (ITOK+3.LE.NTOK) CALL GTPREA(ITOK+3,CELL(4),NTOK,ITYPE,FVALUE)
IF (ITOK+4.LE.NTOK) CALL GTPREA(ITOK+4,CELL(5),NTOK,ITYPE,FVALUE)
IF (ITOK+5.LE.NTOK) CALL GTPREA(ITOK+5,CELL(6),NTOK,ITYPE,FVALUE)
C *********************************************
END
C
C
C_BEGIN_RDRESO
C ================================================
SUBROUTINE RDRESO(ITOK,ITYPE,FVALUE,NTOK,RESMIN,
+ RESMAX,SMIN,SMAX)
C ================================================
C---- Read and decode resolution limits.
C
C---- Arguments:
C
C ITOK (I) INTEGER Number of first field to interpret
C
C ITYPE (I) INTEGER(*) =0 null field
C =1 character string
C =2 number
C (from PARSER)
C
C FVALUE (I) REAL(*) Array of numbers. (from PARSER)
C
C NTOK (I) INTEGER The number of fields parsed. (from PARSER)
C
C
C RESMIN (O) REAL Minimum resolution (in As)
C
C RESMAX (O) REAL Maximum resolution (in As)
C
C SMIN (O) REAL Minimum resolution ( 4sin**2/lambda**2)
C
C SMAX (O) REAL Maximum resolution ( 4sin**2/lambda**2)
C
C_END_RDRESO
C .. Scalar Arguments ..
REAL RESMAX,RESMIN,SMAX,SMIN
INTEGER ITOK,NTOK
C ..
C .. Array Arguments ..
REAL FVALUE(*)
INTEGER ITYPE(*)
C ..
C .. Local Scalars ..
REAL RESTEM,STEM
C ..
C .. External Subroutines ..
EXTERNAL GTPREA
C ..
C .. Intrinsic Functions ..
INTRINSIC SQRT
C ..
C
C---- Global defaults set here
C
RESMAX = 10000.0
RESMIN = .1
IF (NTOK.LT.ITOK) THEN
CALL LERROR(1,0,'Resolution missing')
RETURN
END IF
C
C---- Look at next field on line: this can be
C read resolution limits in A, if only one treat as high
C resolution limit
C
C *************************************
CALL GTPREA(ITOK,RESMIN,NTOK,ITYPE,FVALUE)
C *************************************
C
IF (ABS(RESMIN).LE.0.000001) RESMIN = 0.00001
C
C ***************************************
IF (NTOK.GT.ITOK)
+ CALL GTPREA(ITOK+1,RESMAX,NTOK,ITYPE,FVALUE)
C ***************************************
C
IF (ABS(RESMAX).LE.0.0000001) RESMAX = 100.0
C
C
IF (RESMIN.LE.RESMAX) THEN
RESTEM = RESMAX
RESMAX = RESMIN
RESMIN = RESTEM
END IF
C
C---- option to read 4sin**2/lamda**2
C
IF (RESMIN.LE.1.0 .AND. RESMAX.LE.1.0) THEN
C
C---- swap over smin and resmin etc
C
SMIN = RESMIN
SMAX = RESMAX
RESMAX = SQRT(1.0/SMIN)
RESMIN = SQRT(1.0/SMAX)
ELSE
SMIN = 1.0/RESMAX**2
SMAX = 1.0/RESMIN**2
END IF
C
C
IF (SMIN.GT.SMAX) THEN
STEM = SMAX
SMAX = SMIN
SMIN = STEM
END IF
C
C
RETURN
END
C
C
C_BEGIN_RDSCAL
C ======================================================
SUBROUTINE RDSCAL(ITOK,LINE,IBEG,IEND,ITYP,FVALUE,NTOK,
. NLPRGI,LSPRGI,ILPRGI,SCAL,BB)
C ======================================================
C---- Read and decode SCALE .
C
C---- Arguments:
C
C ITOK (I/O) INTEGER Input: number of first field to interpret
C Output: number of next token to interpret (.gt. 0)
C = 0 if line exhausted (SCAL & BB OK)
C = -1 if no scale given
C = -2 unrecognized label
C
C LINE (I) CHARACTER*(*) Input string (from PARSER)
C
C IBEG (I) INTEGER(*) 1st column number of tokens in field
C (from PARSER)
C
C IEND (I) INTEGER(*) Last column number of tokens in field
C (from PARSER)
C
C ITYP (I) INTEGER(*) =0 null field
C =1 character string
C =2 number
C (from PARSER)
C
C FVALUE (I) REAL(*) Array of numbers. (from PARSER)
C
C NTOK (I) INTEGER The number of fields parsed. (from PARSER)
C
C LSPRGI (I) CHARACTER(*)*30 Program label strings.
C L(abel) S(tring) PRG(ram) I(nput)
C
C NLPRGI (I) INTEGER Number of label strings in LSPRGI
C
C ILPRGI (O) INTEGER Number in array of LSPRGI whose scale has been reset
C
C SCAL (O) REAL Scale factor, no default
C
C BB (O) REAL Temperature factor, default = 0.0
C
C_END_RDSCAL
C
INTEGER ITOK,NTOK,ILPRGI,NLPRGI,JDO
INTEGER IBEG(*),IEND(*),ITYP(*)
REAL FVALUE(*)
CHARACTER*(*) LINE
CHARACTER*30 LSPRGI(*),CWORK
REAL SCAL,BB
C
CWORK = LINE(IBEG(ITOK) :IEND(ITOK))
DO 10 JDO = 1,NLPRGI
C
IF (CWORK.EQ.LSPRGI(JDO)) GO TO 20
C
10 CONTINUE
C
C ***********************
CALL PUTLIN('**** Error input assignment does not match'//
+ ' program labels','ERRWIN')
C ***********************
C
ITOK = -2
RETURN
C
20 ILPRGI = JDO
IF(ITOK+1.GT.NTOK) THEN
ITOK = -1
RETURN
ELSE
IF (ITYP(ITOK+1) .EQ. 2) THEN
CALL GTPREA(ITOK+1,SCAL,NTOK,ITYP,FVALUE)
ELSE
ITOK = -1
RETURN
ENDIF
ENDIF
C
BB = 0
IF(ITOK+2.LE.NTOK) THEN
IF (ITYP(ITOK+2) .EQ. 2) THEN
CALL GTPREA(ITOK+2,BB,NTOK,ITYP,FVALUE)
ITOK = ITOK + 3
ELSE
ITOK = ITOK + 2
ENDIF
IF (ITOK .GT. NTOK) ITOK = 0
ELSE
ITOK = 0
ENDIF
C
RETURN
END
C
C
C_BEGIN_RDRESL
C ======================================================
SUBROUTINE RDRESL(ITOK,ITYPE,FVALUE,CVALUE,NTOK,RESMIN,
+ RESMAX,SMIN,SMAX,ISTAT)
C ======================================================
C---- Read and decode resolution limits.
C Subkeywords in CVALUE recognized:
C LOW read next number as low resolution limit
C HIGH read next number as high resolution limit
C
C If LOW & HIGH are both present, the limits will still be swapped
C to the correct order
C
C If only LOW or HIGH are given, the unset limit (ie either RESMAX, SMAX
C or RESMIN, SMIN) will be set to -1.0. If only one number is given,
C it is treated as a high resolution limit
C
C If both limits are given without keywords, and both are .lt. 1.0,
c it is assumed that the limits are 4(sin theta/lambda)**2 rather than A
C
C---- Arguments:
C
C ITOK (I) INTEGER Number of first field to interpret
C
C ITYP (I) INTEGER(*) =0 null field
C =1 character string
C =2 number
C (from PARSER)
C
C FVALUE (I) REAL(*) Array of numbers. (from PARSER)
C
C NTOK (I) INTEGER The number of fields parsed. (from PARSER)
C
C CVALUE (I) CHARACTER(*)*4 Parsed tokens from program input. (from PARSER)
C
C RESMIN (O) REAL Minimum resolution (in As) (ie low resolution)
C
C RESMAX (O) REAL Maximum resolution (in As) (ie high resolution)
C
C SMIN (O) REAL Minimum resolution ( 4sin**2/lambda**2)
C (ie low resolution)
C
C SMAX (O) REAL Maximum resolution ( 4sin**2/lambda**2)
C (ie high resolution)
C
C ISTAT (O) INTEGER =0 OK
C =-1 illegal subkeyword
C =+1 no limits set
C =+2 illegal number (probably can't happen)
C_END_RDRESL
C
C .. Scalar Arguments ..
REAL RESMAX,RESMIN,SMAX,SMIN
INTEGER ITOK,NTOK,ISTAT
C ..
C .. Array Arguments ..
REAL FVALUE(*)
INTEGER ITYPE(*)
CHARACTER*4 CVALUE(*)
C ..
C .. Local Scalars ..
REAL RESTEM,STEM
INTEGER N, KMNMX, NSET, LFLAG, NKEYS, IKEY
LOGICAL BOTH, KEYWRD
CHARACTER*4 SUBKEY(2)
C ..
C .. External Subroutines ..
EXTERNAL GTTREA, CCPUPC, CHKKEY
C ..
C .. Intrinsic Functions ..
INTRINSIC SQRT
C ..
DATA SUBKEY /'LOW', 'HIGH'/
DATA NKEYS /2/
C
C---- Global defaults set here
C
RESMAX = -1.0
RESMIN = -1.0
SMIN = -1.0
SMAX = -1.0
NSET = 0
KMNMX = 1
ISTAT = 0
BOTH = .TRUE.
KEYWRD = .FALSE.
C
N = ITOK
C
1 IF (N .LE. NTOK) THEN
C
IF (ITYPE(N) .EQ. 1) THEN
C String
CALL CCPUPC(CVALUE(N))
CALL CHKKEY(CVALUE(N),SUBKEY,NKEYS,IKEY)
IF(IKEY.LE.0) THEN
ISTAT = -1
RETURN
C ======
ELSEIF (IKEY .EQ. 1) THEN
C----- subkey LOW
KMNMX = 1
ELSEIF (IKEY .EQ. 2) THEN
C----- subkey HIGH
KMNMX = 2
ENDIF
BOTH = .NOT. BOTH
KEYWRD = .TRUE.
ELSE
C Number
RESTEM = 0.0
C ******************************************
CALL GTTREA(N,RESTEM,LFLAG,NTOK,ITYPE,FVALUE)
C ******************************************
IF (LFLAG .EQ. 0) THEN
IF (KMNMX .EQ. 1) THEN
RESMIN = RESTEM
NSET = NSET+1
KMNMX = 2
ELSEIF (KMNMX .EQ. 2) THEN
RESMAX = RESTEM
NSET = NSET+1
KMNMX = 1
ENDIF
ELSE
ISTAT = +2
ENDIF
ENDIF
N = N+1
GO TO 1
ENDIF
C
C Have any numbers been set?
IF (NSET .EQ. 0) THEN
ISTAT = +1
RETURN
C ======
ELSEIF (NSET .EQ. 1) THEN
C One only set, if no keywords have been defined, use single number as
C high resolution limit
IF (BOTH) THEN
RESMAX = RESMIN
RESMIN = -1.0
ENDIF
ENDIF
C
C---- option to read 4sin**2/lamda**2
IF (.NOT. KEYWRD .AND. NSET .EQ. 2) THEN
IF (RESMIN .GT. 0.0 .AND. RESMIN .LE. 1.0 .AND.
$ RESMAX .GT. 0.0 .AND. RESMAX .LE. 1.0) THEN
C---- swap over SMIN and RESMIN
C
SMIN = RESMIN
RESMIN = SQRT(1.0/SMIN)
C---- swap over SMAX and RESMAX
SMAX = RESMAX
RESMAX = SQRT(1.0/SMAX)
END IF
ENDIF
C
IF (RESMIN .GT. 0.0) THEN
SMIN = 1.0/RESMIN**2
END IF
C
IF (RESMAX .GT. 0.0) THEN
SMAX = 1.0/RESMAX**2
ENDIF
C
C---- Check that they are in the correct order, if both limits read
C
IF (NSET .EQ. 2) THEN
IF (RESMIN.LE.RESMAX) THEN
RESTEM = RESMAX
RESMAX = RESMIN
RESMIN = RESTEM
ENDIF
IF (SMIN.GT.SMAX) THEN
STEM = SMAX
SMAX = SMIN
SMIN = STEM
ENDIF
ENDIF
END
C
C_BEGIN_GTTREA
C =============================================
SUBROUTINE GTTREA(N,X,LFLAG,NTOK,ITYP,FVALUE)
C =============================================
C---- Extract real number X from N'th value of Parser array FVALUE,
C if possible.
C
C If no value, leave X unchanged. If illegal, write message
C
C---- Arguments:
C
C N (I) INTEGER Number of 1st element of FVALUE to be extracted
C
C X (O) REAL Put extracted number here
C
C LFLAG (O) INTEGER = 0 OK (valid number or null field)
C = -1 beyond end of line
C = +1 illegal number
C
C NTOK (I) INTEGER Total number of fields (from PARSER)
C
C ITYP (I) INTEGER(*) =0 null field
C =1 character string
C =2 number
C (from PARSER)
C
C FVALUE (I) REAL(*) Array of numbers to be extracted (from PARSER)
C
C_END_GTTREA
C
C .. Scalar Arguments ..
REAL X
INTEGER N,NTOK,LFLAG
C ..
C .. Array arguments ..
REAL FVALUE(*)
INTEGER ITYP(*)
C ..
C .. Local Scalars ..
CHARACTER LINERR*200
C ..
C .. External Subroutines ..
EXTERNAL LERROR
C ..
C
LFLAG = 0
IF (N.LE.NTOK) THEN
IF (ITYP(N).EQ.2) THEN
X = FVALUE(N)
ELSE IF (ITYP(N).EQ.1) THEN
WRITE (LINERR,FMT='(A,I4)')
+ ' Illegal number in field ',N
C
C ****************************
CALL LERROR(1,0,LINERR)
C ****************************
C
LFLAG = +1
END IF
ELSE
LFLAG = -1
END IF
C
END
C
C_BEGIN_GTTINT
C =============================================
SUBROUTINE GTTINT(N,I,LFLAG,NTOK,ITYP,FVALUE)
C =============================================
C---- Extract integer I from N'th value of Parser array FVALUE,
C if possible.
C
C If no value, leave I unchanged. If illegal, write message.
C
C---- Arguments:
C
C N (I) INTEGER Number of 1st element of FVALUE to be extracted
C
C I (O) INTEGER Put extracted number here
C
C LFLAG (O) INTEGER = 0 OK (valid number or null field)
C = -1 beyond end of line
C = +1 illegal number
C
C NTOK (I) INTEGER Total number of fields (from PARSER)
C
C ITYP (I) INTEGER(*) =0 null field
C =1 character string
C =2 number
C (from PARSER)
C
C FVALUE (I) REAL(*) Array of numbers to be extracted (from PARSER)
C
C_END_GTTINT
C
C IMPLICIT NONE
C .. Scalar Arguments ..
INTEGER I,N,NTOK,LFLAG
C ..
C .. Arrays arguments ..
REAL FVALUE(*)
INTEGER ITYP(*)
C ..
C .. Local Scalars ..
CHARACTER LINERR*100
C ..
C .. External Subroutines ..
EXTERNAL LERROR
C ..
C .. Intrinsic Functions ..
INTRINSIC NINT
C ..
C
LFLAG = 0
IF (N.LE.NTOK) THEN
IF (ITYP(N).EQ.2) THEN
I = NINT(FVALUE(N))
ELSE IF (ITYP(N).EQ.1) THEN
WRITE (LINERR,FMT='(A,I4)') ' Illegal number in field ',N
C
C ****************************
CALL LERROR(1,0,LINERR)
C ****************************
C
LFLAG = +1
END IF
ELSE
LFLAG = -1
END IF
END
C
C_BEGIN_RDATOMSELECT
C ==================================================================
SUBROUTINE RDATOMSELECT(JTOK,INAT0,INAT1,IRES0,IRES1,CHNAM,
+ IMODE,NTOK,LINE,IBEG,IEND,ITYP,IDEC,
+ FVALUE,IFAIL)
C ==================================================================
C
C Subroutine to process atom selection keyword with the following
C general syntax:
C
C <Keywords...> ATOM <inat0> [ [TO] <inat1> ] |
C RESIDUE [ALL | ONS | CA] [ CHAIN <chnam> ]
C <ires0> [ [TO] <ires1> ]
C
C e.g. kywd atom 1 to 100
C kywd residue chain A 20 to 30
C kywd residue all 11 32 etc...
C
C To be compatible with DISTANG, CONTACT etc the ordering of the
C RESIDUE subarguments is flexible, eg RESIDUE 1 TO 9 CA CHAIN B
C is the same as RESIDUE CA CHAIN B 1 TO 9...
C
C The subroutine returns the selection entered by the user and expects the
C calling program to deal with the results. The preceeding keywords are
C relevant for this subroutine
C
C ARGUMENTS
C =========
C
C JTOK (I) INTEGER Number of first field to interpret
C NTOK (I) INTEGER The number of fields parsed, from PARSER
C LINE (I) CHARACTER*(*) Input string, from PARSER
C IBEG (I) INTEGER(*) 1st column number of tokens in field
C (from PARSER)
C IEND (I) INTEGER(*) Last column number of tokens in field
C (from PARSER)
C ITYP (I) INTEGER(*) =0 null field
C =1 character string
C =2 number (from PARSER)
C IDEC (I) INTEGER(*) Number of characters/digits in each token
C (from PARSER)
C FVALUE (I) REAL(*) Array of numbers. (from PARSER)
C
C INAT0 (O) INTEGER Lower limit of atom range (-99 if not set)
C INAT1 (O) INTEGER Upper limit of atom range (-99 if not set)
C IRES0 (O) INTEGER Lower limit of residue range (-99 if not set)
C IRES1 (O) INTEGER Upper limit of residue range (-99 if not set)
C CHNAM (O) CHARACTER*(*) Chain identifier (' ' if not set)
C IMODE (I/O) INTEGER On entry: -1 = don't allow MODE
C any other value = allow MODE
C On exit: Type of atoms to include:
C 1=ALL 2=ONS 3=CA (see eg CONTACT)
C IFAIL (I/O) INTEGER On entry: 0 = suppress warnings
C -1 = print warnings
C On exit: 0 = LINE parsed ok
C >0 = error occured parsing line
C (value of IFAIL is no. of bad token)
C
C RETURNED VALUES
C ===============
C
C The subroutine returns either:
C
C 1. first/last atom numbers, defining a range of atoms, or
C 2. first/last residue numbers, defining a range of residues, plus
C (optionally) chain identifier
C (optionally) a MODE which specifies which type of atoms to
C include: all = (default) all atoms in residue range
C ons = only oxygen and nitrogen atoms
C ca = only CA atoms
C (see CONTACT/DISTANG)
C
C Unset atoms/residue numbers will be returned < 0 (i.e. -99)
C Unset chain identifier will be returned as a blank, i.e. ' '
C Mode defaults to 1 = include all types of atoms.
C
C_END_RDATOMSELECT
C
IMPLICIT NONE
C
C ..Parameters
INTEGER MAXTOK
PARAMETER (MAXTOK=20)
C
C ..Scalar arguments
INTEGER NTOK,JTOK,INAT0,INAT1,IRES0,IRES1,IMODE,IFAIL
CHARACTER LINE*80,CHNAM*(*)
C
C ..Array arguments
INTEGER IBEG(MAXTOK),IEND(MAXTOK),ITYP(MAXTOK),IDEC(MAXTOK)
REAL FVALUE(MAXTOK)
C
C ..Local scalars
INTEGER ITOK,NLIMIT,TEMP
CHARACTER KEY*4,ERRLINE*80
LOGICAL LATOM,LRESI,LCHAIN,LLIMIT
C
C ..Local arrays
INTEGER ILIMIT(2)
C
C ..External subroutines/functions
EXTERNAL CCPUPC,CCPERR
C
C---- Initial checks
C
IF (NTOK.GT.MAXTOK) THEN
ERRLINE = 'RD_KEY_SELECT: too many arguments'
GO TO 9010
END IF
C
IF (JTOK.LT.1 .OR. JTOK.GT.NTOK) THEN
ERRLINE = 'RD_KEY_SELECT: JTOK out of range'
GO TO 9010
END IF
C
C---- Initialise values
C
INAT0 = -99
INAT1 = -99
LATOM = .FALSE.
IRES0 = -99
IRES1 = -99
CHNAM = ' '
C
C---- IMODE
C
IF (IMODE.NE.-1) IMODE = 0
C
C---- Flags for modes
C
LATOM = .FALSE.
LRESI = .FALSE.
LCHAIN = .FALSE.
LLIMIT = .FALSE.
NLIMIT = 0
ERRLINE = ' '
C
C---- Step through line token at a time
C
ITOK = JTOK
C
9000 CONTINUE
KEY = LINE(IBEG(ITOK):IEND(ITOK))
CALL CCPUPC(KEY)
C
C---- ATOM
C ====
IF (KEY(1:4).EQ.'ATOM') THEN
IF (LATOM.OR.LRESI) ERRLINE = 'Multiple ATOM/RESidue keywords'
LATOM = .TRUE.
C
C---- RESIDUE
C =======
ELSE IF (KEY(1:3).EQ.'RES') THEN
IF (LATOM.OR.LRESI) ERRLINE = 'Multiple ATOM/RESidue keywords'
LRESI = .TRUE.
C
C---- MODE: CA / ONS / ALL
C ====================
ELSE IF (KEY(1:3).EQ.'ALL'.OR.
+ KEY(1:3).EQ.'ONS'.OR.
+ KEY(1:2).EQ.'CA') THEN
C
IF (IMODE.EQ.-1)
+ ERRLINE = 'ALL/ONS/CA: invalid specifiers'
IF (.NOT.LRESI)
+ ERRLINE = 'ALL/ONS/CA not allowed without RESidue'
IF (IMODE.GT.0) ERRLINE = 'Only one of CA/ONS/ALL allowed'
C
IF (KEY(1:3).EQ.'ALL') IMODE = 1
IF (KEY(1:3).EQ.'ONS') IMODE = 2
IF (KEY(1:2).EQ.'CA') IMODE = 3
C
C---- CHAIN <chnam>
C =============
ELSE IF (KEY(1:4).EQ.'CHAI') THEN
IF (.NOT.LRESI) ERRLINE = 'CHAIN only allowed after RESidue'
IF (LCHAIN) ERRLINE = 'Only one CHAIN allowed per line'
ITOK = ITOK + 1
IF (ITYP(ITOK).EQ.1 .AND. IDEC(ITOK).LE.2) THEN
CHNAM = LINE(IBEG(ITOK):IEND(ITOK))
LCHAIN = .TRUE.
ELSE
ERRLINE = 'Chain name should be one or two characters'
END IF
C
C---- Number ...
C ==========
C
C These are atom or residue limits ... Process them all together
C The possibilities are: 1 number, 2 numbers or 2 numbers separated
C by "TO"
ELSE IF (ITYP(ITOK).EQ.2) THEN
IF (.NOT.(LATOM .OR. LRESI))
+ ERRLINE = ' Missing ATOM or RESIDUE keyword'
IF (LLIMIT)
+ ERRLINE = ' Already read a set of atom/residue limits'
ILIMIT(1) = INT(FVALUE(ITOK))
ITOK = ITOK + 1
NLIMIT = NLIMIT + 1
C
C Check the next argument - is it "TO"?
IF (ITYP(ITOK).EQ.1) THEN
KEY = LINE(IBEG(ITOK):IEND(ITOK))
CALL CCPUPC(KEY)
IF (KEY(1:2).EQ.'TO') THEN
IF(ITYP(ITOK+1).NE.2 .OR. ITOK.EQ.NTOK)
+ ERRLINE = 'TO should be followed by a number'
ITOK = ITOK + 1
END IF
END IF
C
C Check if the next argument is the second limit
IF (ITYP(ITOK).EQ.2) THEN
ILIMIT(2) = INT(FVALUE(ITOK))
NLIMIT = NLIMIT + 1
ELSE
C
C Otherwise, need to step back one token for next round
ITOK = ITOK - 1
END IF
LLIMIT = .TRUE.
C
C---- Check for TO out of place
C
ELSE IF (KEY(1:2).EQ.'TO') THEN
ERRLINE = 'TO out of place'
C
C---- Keyword unrecognised otherwise
C
ELSE
write(6,*)key
ERRLINE = 'Unrecognised subkeyword'
END IF
C
C---- Use ERRLINE to trap errors
C
IF (ERRLINE.NE.' ') GO TO 9010
C
C---- Parse some more?
C
ITOK = ITOK + 1
IF (ITOK.LE.NTOK) GO TO 9000
C
C---- Sort out the input
C
IF (NLIMIT.EQ.0) THEN
ERRLINE = 'Atom/residue limits unspecified'
GO TO 9010
ELSE IF (NLIMIT.EQ.1) THEN
ILIMIT(2) = ILIMIT(1)
ELSE IF (ILIMIT(1).GT.ILIMIT(2)) THEN
TEMP = ILIMIT(1)
ILIMIT(1) = ILIMIT(2)
ILIMIT(2) = TEMP
END IF
C
IF (LATOM) THEN
INAT0 = ILIMIT(1)
INAT1 = ILIMIT(2)
ELSE
IRES0 = ILIMIT(1)
IRES1 = ILIMIT(2)
END IF
C
IF (IMODE.EQ.0) IMODE = 1
C
IFAIL = 0
RETURN
C
C---- Errors come to here
C
9010 IF (IFAIL.LT.0) CALL CCPERR(2, ERRLINE)
IFAIL = ITOK
RETURN
C
END
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