File: DEP12.pm

package info (click to toggle)
libdebian-dep12-perl 0.2.0-1
  • links: PTS, VCS
  • area: main
  • in suites: forky, sid, trixie
  • size: 124 kB
  • sloc: perl: 481; makefile: 2
file content (444 lines) | stat: -rw-r--r-- 11,761 bytes parent folder | download
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
package Debian::DEP12;

use strict;
use warnings;

# ABSTRACT: interface to Debian DEP 12 format
our $VERSION = '0.2.0'; # VERSION

# As DEP 12 is in draft state and the development is happening in its
# wiki page (https://wiki.debian.org/UpstreamMetadata), this variable
# holds the UTC timestamp of DEP 12 wiki page.
our $DEP12_VERSION = '2021-02-21 11:52:54';

use Data::Validate::Email qw( is_email_rfc822 );
use Data::Validate::URI qw( is_uri );
use Debian::DEP12::ValidationWarning;
use Encode qw( decode );
use Scalar::Util qw( blessed );
use Text::BibTeX::Validate qw( validate_BibTeX );
use YAML::XS;
use version;

# Preventing YAML::XS from doing undesired things:
$YAML::XS::DumpCode = 0;
$YAML::XS::LoadBlessed = 0;
$YAML::XS::UseCode = 0;

my @fields = qw(
    Archive
    ASCL-Id
    Bug-Database
    Bug-Submit
    Cite-As
    Changelog
    CPE
    Documentation
    Donation
    FAQ
    Funding
    Gallery
    Other-References
    Reference
    Registration
    Registry
    Repository
    Repository-Browse
    Screenshots
    Security-Contact
    Webservice
);

my @list_fields = qw(
    Funding
    Reference
    Registry
    Screenshots
);

my @reserved_fields = qw(
    ping
    YAML-ALL
    YAML-URL
    YAML-REFRESH-DATE
);

=head1 NAME

Debian::DEP12 - interface to Debian DEP 12 format

=head1 SYNOPSIS

    use Debian::DEP12;

    my $meta = Debian::DEP12->new;
    $meta->set( 'Bug-Database',
                'https://github.com/merkys/Debian-DEP12/issues' );

    $meta->validate;

=head1 DESCRIPTION

Debian::DEP12 is an object-oriented interface for Debian DEP 12 format,
also known as debian/upstream/metadata. Primary focus of the initial
development is the validation and fixing of DEP 12 data.

DEP 12 is in draft state and the development is happening in its wiki
page (L<https://wiki.debian.org/UpstreamMetadata>). Thus Debian::DEP12
attempts to keep up with the DEP 12 specification. To keep track, the
UTC timestamp of DEP 12 wiki page is stored in C<$DEP12_VERSION> class
variable.

Contributions welcome!

=head1 METHODS

=head2 new( $what )

Creates a new Debian::DEP12 instance from either YAML,
L<Text::BibTeX::Entry|Text::BibTeX::Entry> or
L<Text::BibTeX::File|Text::BibTeX::File> instances, or plain Perl hash
reference with DEP 12 fields and their values.

=cut

sub new
{
    my( $class, $what ) = @_;

    my $self;
    if( !defined $what ) {
        $self = {};
    } elsif( blessed $what &&
             ( $what->isa( 'Text::BibTeX::Entry' ) ||
               $what->isa( 'Text::BibTeX::File' ) ) ) {

        my @entries;
        if( $what->isa( 'Text::BibTeX::Entry' ) ) {
            push @entries, $what;
        } else {
            require Text::BibTeX::Entry;
            while( my $entry = Text::BibTeX::Entry->new( $what ) ) {
                push @entries, $entry;
            }
        }

        my @references;
        for my $entry (@entries) {
            # FIXME: Filter only supported keys (?)
            push @references,
                 { map { _canonical_BibTeX_key( $_ ) =>
                         decode( 'UTF-8', $entry->get( $_ ) ) }
                   grep { defined $entry->get( $_ ) }
                        $entry->fieldlist };

            for ('number', 'pages', 'volume', 'year') {
                next if !exists $references[-1]->{ucfirst $_};
                next if $references[-1]->{ucfirst $_} !~ /^[1-9][0-9]*$/;
                $references[-1]->{ucfirst $_} =
                    int $references[-1]->{ucfirst $_};
            }
        }

        return $class->new( { Reference => \@references } );
    } elsif( ref $what eq '' ) {
        # Text in YAML format
        if( version->parse($YAML::XS::VERSION) < version->parse('0.69') ) {
            die 'YAML::XS < 0.69 is insecure' . "\n";
        }

        $self = Load $what;
    } elsif( ref $what eq 'HASH' ) {
        $self = $what;
    } else {
        die 'cannot create Debian::DEP12 from ' . ref( $what ) . "\n";
    }

    return bless $self, $class;
}

sub _canonical_BibTeX_key
{
    my( $key ) = @_;
    return uc $key if $key =~ /^(doi|isbn|issn|pmid|url)$/;
    return ucfirst $key;
}

=head2 fields()

Returns an array of fields defined in the instance in any order.

=cut

sub fields
{
    return keys %{$_[0]};
}

=head2 get( $field )

Returns value of a field.

=cut

sub get
{
    my( $self, $field ) = @_;
    return $self->{$field};
}

=head2 set( $field, $value )

Sets a new value for a field. Returns the old value.

=cut

sub set
{
    my( $self, $field, $value ) = @_;
    ( my $old_value, $self->{$field} ) = ( $self->{$field}, $value );
    return $old_value;
}

=head2 delete( $field )

Unsets value for a field. Returns the old value.

=cut

sub delete
{
    my( $self, $field ) = @_;

    my $old_value = $self->{$field};
    delete $self->{$field};

    return $old_value;
}

sub _to_BibTeX
{
    my( $self ) = @_;

    my $reference = $self->get( 'Reference' );
    if( ref $reference eq 'HASH' ) {
        $reference = [ $reference ];
    }

    my @BibTeX;
    for my $reference (@$reference) {
        push @BibTeX,
             { map { lc( $_ ) => $reference->{$_} } keys %$reference };
    }
    return @BibTeX;
}

=head2 to_YAML()

Returns a string with YAML representation.

=cut

sub to_YAML
{
    my( $self ) = @_;
    my $yaml = Dump $self;

    # HACK: no better way to serialize plain data?
    $yaml =~ s/^---[^\n]*\n//m;
    return $yaml;
}

=head2 validate()

Performs checks of DEP 12 data in the instance and returns an array of
validation messages as instances of
L<Debian::DEP12::ValidationWarning|Debian::DEP12::ValidationWarning>.

=cut

sub validate
{
    my( $self ) = @_;

    my @warnings;

    # TODO: validate other fields

    for my $key (sort $self->fields) {
        if( !grep { $_ eq $key } @fields ) {
            push @warnings,
                 _warn_value( 'unknown field', $key, $self->get( $key ) );
        }

        if( grep { $_ eq $key } @reserved_fields ) {
            push @warnings,
                 _warn_value( 'reserved field', $key, $self->get( $key ) );
        }

        if( ref $self->get( $key ) && !grep { $_ eq $key } @list_fields ) {
            push @warnings,
                 _warn_value( 'scalar value expected',
                              $key,
                              $self->get( $key ) );
        }
    }

    for my $key ('Bug-Database', 'Bug-Submit', 'Changelog',
                 'Documentation', 'Donation', 'FAQ', 'Gallery',
                 'Other-References', 'Registration', 'Repository',
                 'Repository-Browse', 'Screenshots', 'Webservice') {
        next if !exists $self->{$key};

        if( !defined $self->get( $key ) ) {
            push @warnings, _warn_value( 'undefined value', $key );
            next;
        }

        my @values;
        if( ref $self->get( $key ) eq 'ARRAY' ) {
            @values = @{$self->get( $key )};
        } else {
            @values = ( $self->get( $key ) );
        }

        for my $i (0..$#values) {
            my $yamlpath = $key .
                           (ref $self->get( $key ) eq 'ARRAY' ? "[$i]" : '');
            $_ = $values[$i];

            if( ref $_ ) {
                push @warnings,
                     _warn_value( 'non-scalar value',
                                  $yamlpath,
                                  $_ );
                next;
            }

            next if defined is_uri $_;

            if( /^(.*)\n$/ && defined is_uri $1 ) {
                push @warnings,
                     _warn_value( 'URL has trailing newline character',
                                  $yamlpath,
                                  $_,
                                  { suggestion => $1 } );
                next;
            }

            if( is_email_rfc822( $_ ) ) {
                push @warnings,
                     _warn_value( 'value \'%(value)s\' is better written as \'%(suggestion)s\'',
                                  $yamlpath,
                                  $_,
                                  { suggestion => 'mailto:' . $_ } );
                next;
            }

            push @warnings,
                 _warn_value( 'value \'%(value)s\' does not look like valid URL',
                              $yamlpath,
                              $_ );
        }
    }

    if( defined $self->get( 'Registry' ) &&
        ref $self->get( 'Registry' ) eq 'ARRAY' ) {
        # TODO: report non-arrays

        my @registry = @{$self->get( 'Registry' )};
        for my $i (0..$#registry) {
            my @unknown_fields = grep { $_ !~ /^(Name|Entry)$/ }
                                      sort keys %{$registry[$i]};
            for (@unknown_fields) {
                push @warnings,
                     _warn_value( 'unknown field',
                                  "Registry[$i].$_",
                                  $registry[$i]->{$_} );
            }

            for ('Name', 'Entry') {
                if( !exists $registry[$i]->{$_} ) {
                    push @warnings,
                         _warn_value( 'missing mandatory field',
                                      "Registry[$i].$_" );
                    next;
                }

                if( !defined $registry[$i]->{$_} ) {
                    push @warnings,
                         _warn_value( 'undefined value',
                                      "Registry[$i].$_" );
                    next;
                }

                if( ref $registry[$i]->{$_} ) {
                    push @warnings,
                         _warn_value( 'non-scalar value',
                                      "Registry[$i].$_",
                                      $registry[$i]->{$_} );
                    next;
                }

                if( $_ eq 'Name' ) {
                    if( $registry[$i]->{$_} !~
                        /^(bio\.tools|biii|OMICtools|SciCrunch|conda:.+|opam|PyPI)$/ ) {
                        push @warnings,
                             _warn_value( 'unknown registry \'%(value)s\'',
                                          "Registry[$i].$_",
                                          $registry[$i]->{$_} );
                    }
                } else { # Entry
                    if( defined is_uri $registry[$i]->{$_} ) {
                        push @warnings,
                             _warn_value( 'should not be URI',
                                          "Registry[$i].$_",
                                          $registry[$i]->{$_} );
                    }
                }
            }
        }
    }

    my @BibTeX = $self->_to_BibTeX;
    for my $i (0..$#BibTeX) {
        my $BibTeX = $BibTeX[$i];
        my @BibTeX_warnings = validate_BibTeX( $BibTeX );
        for (@BibTeX_warnings) {
            # For everything under Reference outputting YAML paths like
            # https://github.com/wwkimball/yamlpath/wiki/Segments-of-a-YAML-Path
            $_->set( 'field',
                     "Reference" .
                     (ref $self->get( 'Reference' ) eq 'ARRAY' ? "[$i]" : '') . '.' .
                     _canonical_BibTeX_key( $_->get( 'field' ) ) );
            bless $_, Debian::DEP12::ValidationWarning::;
        }
        push @warnings, @BibTeX_warnings;
    }

    return @warnings;
}

sub _warn_value
{
    my( $message, $field, $value, $extra ) = @_;
    $extra = {} unless $extra;
    return Debian::DEP12::ValidationWarning->new(
            $message,
            { field => $field,
              value => $value,
              %$extra } );
}

=head1 SEE ALSO

For the description of DEP 12 refer to
L<https://dep-team.pages.debian.net/deps/dep12/>.

=head1 AUTHORS

Andrius Merkys, E<lt>merkys@cpan.orgE<gt>

=cut

1;