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package Demeter::Get;
=for Copyright
.
Copyright (c) 2006-2019 Bruce Ravel (http://bruceravel.github.io/home).
All rights reserved.
.
This file is free software; you can redistribute it and/or
modify it under the same terms as Perl itself. See The Perl
Artistic License.
.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
=cut
use Moose::Role;
my $mode = Demeter->mo;
sub backend_name {
my ($self) = @_;
if ($self->is_ifeffit) {
return 'Ifeffit';
} elsif ($self->is_larch) {
return 'Larch';
};
};
sub backend_id {
my ($self) = @_;
if ($self->is_ifeffit) {
return "Ifeffit " . Ifeffit::get_string('&build')
} elsif ($self->is_larch) {
return $self->backend_name;
#return "Larch " . Larch::get_larch_scalar('larch.__version__');
};
};
sub backend_version {
my ($self) = @_;
if ($self->is_ifeffit) {
return (split(" ", Ifeffit::get_string('&build')))[0];
} elsif ($self->is_larch) {
return 'X.xx';
#return Larch::get_larch_scalar('larch.__version__');
};
};
sub fetch_scalar {
my ($self, $param) = @_;
if ($self->is_ifeffit) {
return Ifeffit::get_scalar($param);
## munge ifeffit parameter names to their larch equivalent
} elsif ($self->is_larch) {
my $gp = $self->group || Demeter->mo->throwaway_group;
if ($param =~ m{norm_c\d}) {
$param = $gp.'.pre_edge_details.'.$param;
} elsif ($param =~ m{epsilon_([kr])}) {
#if ($self->fit_group) {
# my $n = $self->fit_data-1;
# $param = join('.', $self->fit_group, 'datasets['.$n.']', 'epsilon_'.$1);
# return Larch::get_larch_array($param);
#} else {
$param = join('.', $self->group, 'epsilon_'.$1);
#};
} elsif ($param =~ m{r_factor}) {
$param = $gp.'.params.rfactor';
} elsif ($param =~ m{(?<!demlcf\.)(chi_reduced|chi_square)}) { # NOT the ones from an LCF fit!
$param = $gp.'.params.'.$1;
} elsif ($param =~ m{\A(?:e0|edge_step|kmax_suggest)\z}) {
$param = $gp.'.'.$param;
## normalization parameters
} elsif ($param =~ m{pre_(?:offset|slope)}) {
$param = $gp.'.pre_edge_details.'.$param;
## auto-alignment parameter
} elsif ($param =~ m{delta_(aa__)_(esh|scale)}) {
$param = $1.'.'.$2.'.stderr';
} elsif ($param =~ m{(aa__)_(esh|scale)\b}) {
$param = $1.'.'.$2.'.value';
} elsif ($param =~ m{delta_(aa__)_(esh|scale)}) {
$param = $1.'.'.$2.'.stderr';
## log ratio/phase difference parameters
} elsif ($param =~ m{\A(lr_)__(pd[024])}) {
$param = $1.'e.'.$2.'.value';
} elsif ($param =~ m{\A(lr_)__(pd[13])}) {
$param = $1.'o.'.$2.'.value';
} elsif ($param =~ m{delta_(lr_)__(pd[024])}) {
$param = $1.'e.'.$2.'.stderr';
} elsif ($param =~ m{delta_(lr_)__(pd[13])}) {
$param = $1.'o.'.$2.'.stderr';
## exafs fitting parameters
} elsif ($param =~ m{delta_(.+)}) {
$param = join('.', 'gds', $1, 'stderr');
} elsif ($param =~ m{\Ademlcf.+_(a|e|offset|slope)\z}) {
$param .= '.value';
} elsif ($param =~ m{\Adempeak\.\w+_\d\z}) {
$param .= '.value';
} elsif ($param =~ m{_p(\d+)\z}) {
$param = 'dempcatt._p'.$1;
} elsif ($param eq 'filter_top') {
$param = "f1f2.$param";
} elsif (Demeter->mo->fit) { # a fit is happening, this is a Parameter, need its value
if ($param !~ m{\.(?:value|stderr)\z}) {
if (ref($self) =~ m{GDS}) {
$param = 'gds.'.$param.'.value';
} else {
$param = $param.'.value';
};
};
}
$param = Larch::get_larch_scalar($param);
if (not defined $param) {
$param = 0;
} elsif (ref($param) eq 'ARRAY') { # not 100% sure this is needed
$param = @{$param}[0];
}
return $param;
};
};
sub denull {
return 0 if $_[0] eq 'null';
return $_[0];
};
sub fetch_string {
my ($self, $param) = @_;
$param =~ s{\A\$}{};
if ($self->is_ifeffit) {
return Ifeffit::get_string($param);
} elsif ($self->is_larch) {
if ($param eq 'column_label') {
my $gp = ($self->attribute_exists('group') and $self->group) ? $self->group : Demeter->mo->throwaway_group;
$param = $gp.'.array_labels';
$self->dispose("show $param");
my $list = Larch::get_larch_scalar($param);
$list = eval($list) if ($list and ref($list) ne 'ARRAY');
return q{} if not $list;
return join(" ", @$list);
} else {
return Larch::get_larch_scalar($param);
};
};
};
sub fetch_array {
my ($self, $param) = @_;
if ($self->is_ifeffit) {
return Ifeffit::get_array($param);
} elsif ($self->is_larch) {
#if ($param =~ m{pre\z}) {
# $param .= '_edge';
#}elsif ($param =~ m{post\z}) {
# $param .= '_edge';
#};
return Larch::get_larch_array($param);
};
};
sub toggle_echo {
my ($self, $onoff) = @_;
my $prior = 1;
if ($self->is_ifeffit) {
$prior = $self->fetch_scalar("\&screen_echo");
$self->dispose("set \&screen_echo = $onoff\n");
return $prior;
} elsif ($self->is_larch) {
return $prior;
};
};
sub echo_lines {
my ($self, $param) = @_;
my @lines = ();
if ($self->is_ifeffit) {
my $save = $self->fetch_scalar("\&screen_echo");
$self->dispose("\&screen_echo = 0\nshow \@group ".$self->group);
my $lines = $self->fetch_scalar('&echo_lines');
$self->dispose("\&screen_echo = $save\n"), return () if not $lines;
foreach my $l (1 .. $lines) {
push @lines, Ifeffit::get_echo();
};
$self->dispose("\&screen_echo = $save\n") if $save;
return @lines;
} elsif ($self->is_larch) {
return 1;
};
};
sub place_scalar {
my ($self, $param, $value) = @_;
if ($self->is_ifeffit) {
Ifeffit::put_scalar($param, $value);
} elsif ($self->is_larch) {
Larch::put_larch_scalar($param, $value);
};
return 1;
};
sub place_string {
my ($self, $param, $value) = @_;
if ($self->is_ifeffit) {
Ifeffit::put_string($param, $value);
} elsif ($self->is_larch) {
Larch::put_larch_scalar($param, $value);
};
return 1;
};
sub place_array {
my ($self, $param, $arrayref) = @_;
if ($self->is_ifeffit) {
Ifeffit::put_array($param, $arrayref);
} elsif ($self->is_larch) {
#print '>>>>', $param, $/;
Larch::put_larch_array($param, $arrayref);
};
return 1;
};
sub header_strings {
my ($self, @list) = @_;
my $i = 1;
if ($self->is_ifeffit) { # ifeffit
foreach my $line (@list) {
++$i;
my $t = sprintf("%s%2.2d", 'dem_data_', $i);
$self->place_string($t, $line);
};
} else { # larch
$self -> co -> set(headers => \@list);
$self->dispense("process", "save_header");
};
return $self;
};
1;
=head1 NAME
Demeter::Get - Choke point for probing Ifeffit, Larch, or other backends
=head1 VERSION
This documentation refers to Demeter version 0.9.26.
=head1 SYNOPSIS
$number = $object -> fetch_scalar('foo');
$string = $object -> fetch_string('bar');
@array = $object -> fetch_array('blah.x');
$object -> place_scalar('foo', 5);
$object -> place_string('bar', 'Fred');
$object -> place_array('blah.x', \@list);
=head1 DESCRIPTION
This module provides a single choke point for retrieving data from
Ifeffit, Larch, or other data processing backeeeends. Based on the
value of the Mode objects "template_process" attribute, the correct
thing will be done to obtain scalar, string, array, or other data from
the backend.
=head1 METHODS
=head2 Methods for getting data
=over 4
=item C<fetch_scalar>
Return a scalar value from a named variable in the backend's memory.
=item C<fetch_string>
Return a string value from a named variable in the backend's memory.
=item C<fetch_array>
Return an array value from a named variable in the backend's memory.
Note that this returns an array, not an array reference.
=back
=head2 Methods for putting data
=over 4
=item C<place_scalar>
Push a scalar value to a named variable the backend.
=item C<place_string>
Push a string value to a named variable the backend.
=item C<place_array>
Push an array value to a named variable the backend. Note that this
takes an array reference as its argument.
=back
=head1 CONFIGURATION
See L<Demeter::Config> for a description of the configuration system.
=head1 DEPENDENCIES
Demeter's dependencies are in the F<Build.PL> file.
=head1 BUGS AND LIMITATIONS
=over 4
=item *
Demeter and feffit backends ...
=item *
Larch backend not written....
=back
Please report problems to the Ifeffit Mailing List
(L<http://cars9.uchicago.edu/mailman/listinfo/ifeffit/>)
Patches are welcome.
=head1 AUTHOR
Bruce Ravel, L<http://bruceravel.github.io/home>
L<http://bruceravel.github.io/demeter/>
=head1 LICENCE AND COPYRIGHT
Copyright (c) 2006-2019 Bruce Ravel (L<http://bruceravel.github.io/home>). All rights reserved.
This module is free software; you can redistribute it and/or
modify it under the same terms as Perl itself. See L<perlgpl>.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
=cut
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