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package Demeter::UI::Athena::Dispersive;
use strict;
use warnings;
use Wx qw( :everything );
use base 'Wx::Panel';
use Wx::Event qw(EVT_BUTTON EVT_CHECKBOX EVT_FILEPICKER_CHANGED);
#use Demeter::UI::Wx::SpecialCharacters qw(:all);
use Cwd;
use vars qw($label);
$label = "Calibrate dispersive XAS data";
my $tcsize = [120,-1];
sub new {
my ($class, $parent, $app) = @_;
my $this = $class->SUPER::new($parent, -1, wxDefaultPosition, wxDefaultSize, wxMAXIMIZE_BOX );
$this->{pixel} = q{};
$this->{yaml} = File::Spec->catfile(Demeter->dot_folder, 'athena.dxas');
my $box = Wx::BoxSizer->new( wxVERTICAL);
$this->{sizer} = $box;
if (not Demeter->co->default('athena', 'show_dispersive')) {
$box->Add(Wx::StaticText->new($this, -1, "Dispersive data calibration is disabled at this time."),
0, wxALL|wxALIGN_CENTER_HORIZONTAL, 5);
$box->Add(1,1,1);
} else {
################################################################################
## show calibration standard
my $hbox = Wx::BoxSizer->new( wxHORIZONTAL);
$hbox -> Add(Wx::StaticText->new($this, -1, 'Calibration standard: '), 0, wxALL, 3);
$this->{group} = Wx::StaticText->new($this, -1, q{});
$hbox -> Add($this->{group}, 0, wxGROW|wxALL, 3);
$box -> Add($hbox, 0, wxGROW|wxALL, 5);
$hbox = Wx::BoxSizer->new( wxHORIZONTAL);
$box -> Add($hbox, 0, wxGROW|wxALL, 5);
my $leftbox = Wx::BoxSizer->new( wxVERTICAL);
$hbox -> Add($leftbox, 0, wxGROW|wxALL, 5);
$this->{beamline} = Wx::RadioBox->new($this, -1, 'Beamline', wxDefaultPosition, wxDefaultSize,
['SLRI BL5', 'ESRF ID24',], 1, wxRA_SPECIFY_COLS);
$leftbox->Add($this->{beamline}, 0, wxGROW|wxALL, 5);
my $rightbox = Wx::BoxSizer->new( wxVERTICAL);
$hbox -> Add($rightbox, 1, wxGROW|wxALL, 5);
################################################################################
## control for importing dispersive standard
my $dispbox = Wx::StaticBox->new($this, -1, 'Import dispersive standard', wxDefaultPosition, wxDefaultSize);
my $dispboxsizer = Wx::StaticBoxSizer->new( $dispbox, wxVERTICAL );
##$dispbox -> SetFont( Wx::Font->new( Wx::SystemSettings::GetFont(wxSYS_DEFAULT_GUI_FONT)->GetPointSize, wxDEFAULT, wxNORMAL, wxNORMAL, 0, "" ) );
$this->{import} = Wx::FilePickerCtrl->new($this, -1, cwd, 'Select a file', "*",
wxDefaultPosition, wxDefaultSize,
wxFLP_OPEN|wxFLP_FILE_MUST_EXIST|wxFLP_USE_TEXTCTRL|wxFLP_CHANGE_DIR);
$dispboxsizer -> Add($this->{import}, 1, wxGROW|wxALL, 5);
$rightbox -> Add($dispboxsizer, 0, wxGROW|wxALL, 5);
################################################################################
## controls for calibration parameters
my $gbs = Wx::GridBagSizer->new( 5, 5 );
$gbs->Add(Wx::StaticText->new($this, -1, 'Offset'), Wx::GBPosition->new(0,0));
$gbs->Add(Wx::StaticText->new($this, -1, 'Linear'), Wx::GBPosition->new(1,0));
$gbs->Add(Wx::StaticText->new($this, -1, 'Quadratic'), Wx::GBPosition->new(2,0));
$this->{offset} = Wx::TextCtrl->new($this, -1, 0, wxDefaultPosition, $tcsize, wxTE_PROCESS_ENTER);
$this->{linear} = Wx::TextCtrl->new($this, -1, 0, wxDefaultPosition, $tcsize, wxTE_PROCESS_ENTER);
$this->{quadratic} = Wx::TextCtrl->new($this, -1, 0, wxDefaultPosition, $tcsize, wxTE_PROCESS_ENTER);
$this->{constrain} = Wx::CheckBox->new($this, -1, "Constrain offset to linear term",);
$this->{reset} = Wx::Button ->new($this, -1, "Reset parameters",);
$gbs->Add($this->{offset}, Wx::GBPosition->new(0,1));
$gbs->Add($this->{linear}, Wx::GBPosition->new(1,1));
$gbs->Add($this->{quadratic}, Wx::GBPosition->new(2,1));
#$gbs->Add($this->{constrain}, Wx::GBPosition->new(0,2));
$gbs->Add($this->{reset}, Wx::GBPosition->new(1,2));
$rightbox -> Add($gbs, 0, wxALIGN_CENTER_HORIZONTAL|wxALL, 5);
################################################################################
## actions
$this->{refine} = Wx::Button->new($this, -1, 'Refine calibration parameters', wxDefaultPosition, $tcsize);
$this->{replot} = Wx::Button->new($this, -1, 'Replot calibration data', wxDefaultPosition, $tcsize);
$this->{make} = Wx::Button->new($this, -1, 'Make data group', wxDefaultPosition, $tcsize);
$box -> Add($this->{$_}, 0, wxGROW|wxALL, 5) foreach (qw(refine replot make));
EVT_BUTTON ($this, $this->{reset}, \&Reset);
EVT_BUTTON ($this, $this->{refine}, \&refine);
EVT_BUTTON ($this, $this->{replot}, \&replot);
EVT_BUTTON ($this, $this->{make}, \&make);
EVT_CHECKBOX($this, $this->{constrain}, \&constrain);
EVT_FILEPICKER_CHANGED($this, $this->{import}, \&set);
map {$this->{$_}->Enable(0)} qw(reset refine replot make constrain);
$this->{constrain}->Show(0);
$box->Add(1,1,1); # this spacer may not be needed, Journal.pm, for example
};
$this->{document} = Wx::Button->new($this, -1, 'Document section: Dispersive XAS');
$box -> Add($this->{document}, 0, wxGROW|wxALL, 2);
EVT_BUTTON($this, $this->{document}, sub{ $app->document("process.pixel")});
$this->SetSizerAndFit($box);
return $this;
};
## deprecated?
sub pull_values {
my ($this, $data) = @_;
1;
};
## this subroutine fills the controls when an item is selected from the Group list
sub push_values {
my ($this, $data) = @_;
return if not Demeter->co->default('athena', 'show_dispersive');
$this->{group}->SetLabel($data->name);
my $onoff = ($this->filecheck(1)) ? 1 : 0;
map {$this->{$_}->Enable($onoff)} qw(reset refine replot make constrain);
1;
};
## this subroutine sets the enabled/frozen state of the controls
sub mode {
my ($this, $data, $enabled, $frozen) = @_;
1;
};
## yes, there is some overlap between what push_values and mode do.
## This separation was useful in Main.pm. Some of the other tools
## make mode a null op.
sub filecheck {
my ($this, $quiet) = @_;
$quiet ||= 0;
my $file = $this->{import}->GetPath;
if (($file =~ m{\A\s*\z}) or (-d $file)) {
$::app->{main}->status("You have not yet specified a dispersive standard", 'error|nobuffer') if not $quiet;
return 0;
};
if (not -e $file) {
$::app->{main}->status("The specified dispersive standard does not exist", 'error|nobuffer') if not $quiet;
return 0;
};
if (not -r $file) {
$::app->{main}->status("The specified dispersive standard cannot be read", 'error|nobuffer') if not $quiet;
return 0;
};
return $file;
};
sub set {
my ($this, $event) = @_;
my $file = $this->filecheck;
return 0 if not $file;
my $busy = Wx::BusyCursor->new();
$::app->{main}->status("Processing calibration and dispersive standards and setting initial parameter guesses");
my $nor2 = Demeter->co->default("dispersive", "bkg_nor2") || 1000;
my @columns;
if ($this->{beamline}->GetStringSelection =~ m{SLRI}) {
@columns = (energy=>'$1', numerator=>'$2', denominator=>'$3', ln=>1);
} elsif ($this->{beamline}->GetStringSelection =~ m{ESRF}) {
@columns = (energy=>'$1', numerator=>'$2', denominator=>1, ln=>1);
};
$this->{pixel} = Demeter::Data::Pixel->new(file=>$file, bkg_nor2=>$nor2, @columns);
$this->{pixel} -> standard($::app->current_data);
$this->{pixel} -> guess;
$this->{offset} -> SetValue(sprintf("%.6f", $this->{pixel}->offset));
$this->{linear} -> SetValue(sprintf("%.6f", $this->{pixel}->linear));
$this->{quadratic} -> SetValue(sprintf("%.9f", $this->{pixel}->quadratic));
map {$this->{$_}->Enable(1)} qw(reset refine replot make constrain);
undef $busy;
$this->replot(0);
};
sub Reset {
my ($this, $event) = @_;
$this->{pixel}->DEMOLISH;
$this->set;
};
sub refine {
my ($this, $event) = @_;
my $file = $this->filecheck;
return 0 if not $file;
my $busy = Wx::BusyCursor->new();
$::app->{main}->status("Refining dispersive calibration parameters");
$this->{pixel}->file($file);
$this->{pixel}->standard($::app->current_data);
$this->{pixel}->offset($this->{offset} -> GetValue);
$this->{pixel}->linear($this->{linear} -> GetValue);
$this->{pixel}->quadratic($this->{quadratic} -> GetValue);
$this->{pixel}->pixel;
$this->{offset} -> SetValue(sprintf("%.6f", $this->{pixel}->offset));
$this->{linear} -> SetValue(sprintf("%.6f", $this->{pixel}->linear));
$this->{quadratic} -> SetValue(sprintf("%.9f", $this->{pixel}->quadratic));
undef $busy;
$this->replot(0);
};
sub replot {
my ($this, $event) = @_;
my $busy = Wx::BusyCursor->new();
if ($event) {
$this->{pixel}->offset($this->{offset} -> GetValue);
$this->{pixel}->linear($this->{linear} -> GetValue);
$this->{pixel}->quadratic($this->{quadratic} -> GetValue);
};
my $temp = $this->{pixel} -> apply;
$this -> {pixel} -> standard -> po -> start_plot;
$this -> {pixel} -> standard -> po -> set(e_mu=>1, e_norm=>1,
emin=>Demeter->co->default("dispersive", "emin"),
emax=>Demeter->co->default("dispersive", "emax"),
e_markers=>0, e_bkg=>0, e_pre=>0, e_post=>0, e_der=>0, e_sec=>0);
$this -> {pixel} -> standard -> plot('E');
$temp -> plot('E');
$temp -> DEMOLISH;
my $hash = {offset => $this->{pixel}->offset,
linear => $this->{pixel}->linear,
quadratic => $this->{pixel}->quadratic};
my $string .= YAML::Tiny::Dump($hash);
open(my $PERSIST, '>', $this->{yaml});
print $PERSIST $string;
close $PERSIST;
$::app->{main}->status("Plotted calibration and dispersive standards");
undef $busy;
};
sub make {
my ($this, $event) = @_;
if ($event) {
$this->{pixel}->offset($this->{offset} -> GetValue);
$this->{pixel}->linear($this->{linear} -> GetValue);
$this->{pixel}->quadratic($this->{quadratic} -> GetValue);
};
my $dxas = $this->{pixel} -> apply;
my $index = $::app->current_index;
if ($index == $::app->{main}->{list}->GetCount-1) {
$::app->{main}->{list}->AddData($dxas->name, $dxas);
} else {
$::app->{main}->{list}->InsertData($dxas->name, $index+1, $dxas);
};
$::app->{main}->status("Did dispersion correction for " . $dxas->name." and made a new data group");
$::app->modified(1);
$::app->heap_check(0);
};
sub constrain {
my ($this, $event) = @_;
$::app->{main}->status("Nothing... (constrain)");
};
1;
=head1 NAME
Demeter::UI::Athena::Dispersive - A tool for calibrating dispersive XAFS data
=head1 VERSION
This documentation refers to Demeter version 0.9.26.
=head1 SYNOPSIS
This module provides a
=head1 CONFIGURATION
=head1 DEPENDENCIES
Demeter's dependencies are in the F<Build.PL> file.
=head1 BUGS AND LIMITATIONS
=over 4
=item *
This 'n' that
=back
Please report problems to the Ifeffit Mailing List
(L<http://cars9.uchicago.edu/mailman/listinfo/ifeffit/>)
Patches are welcome.
=head1 AUTHOR
Bruce Ravel, L<http://bruceravel.github.io/home>
L<http://bruceravel.github.io/demeter/>
=head1 LICENCE AND COPYRIGHT
Copyright (c) 2006-2019 Bruce Ravel (L<http://bruceravel.github.io/home>). All rights reserved.
This module is free software; you can redistribute it and/or
modify it under the same terms as Perl itself. See L<perlgpl>.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
=cut
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