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//
// This file is part of libGDF.
//
// libGDF is free software: you can redistribute it and/or modify
// it under the terms of the GNU Lesser General Public License as
// published by the Free Software Foundation, either version 3 of
// the License, or (at your option) any later version.
//
// libGDF is distributed in the hope that it will be useful,
// but WITHOUT ANY WARRANTY; without even the implied warranty of
// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
// GNU Lesser General Public License for more details.
//
// You should have received a copy of the GNU Lesser General Public License
// along with libGDF. If not, see <http://www.gnu.org/licenses/>.
//
// Copyright 2010 Martin Billinger
#include "gdf_mex.h"
#include "matlab_tools/InstanceManager.h"
#include "matlab_tools/Commands.h"
#include "matlab_tools/mxStructAccess.h"
#include <GDF/Writer.h>
#include <mex.h>
#include "math.h"
using namespace std;
#ifndef trunc
inline double trunc( const double a ) { return floor( a ); }
#endif
#ifdef _WIN32
inline bool isfinite( const double a ) { return _finite( a ); }
#endif
// ===================================================================================================
// Object Interface to mex
// ===================================================================================================
class CmexObject
{
public:
CmexObject( );
~CmexObject( );
void execute( size_t nlhs, mxArray *plhs[], size_t nrhs, const mxArray *prhs[] );
static CmexObject &getInstance( ) { return instance; }
InstanceManager<gdf::Writer> writers;
CommandManager commands;
private:
static CmexObject instance;
};
// ===================================================================================================
// Commands
// ===================================================================================================
class CMD_init : public Command { void execute( mxArray *plhs[], const mxArray *prhs[] ); };
class CMD_clear : public Command { void execute( mxArray *plhs[], const mxArray *prhs[] ); };
class CMD_clearall : public Command { void execute( mxArray *plhs[], const mxArray *prhs[] ); };
class CMD_getheader : public Command { void execute( mxArray *plhs[], const mxArray *prhs[] ); };
class CMD_setheader : public Command { void execute( mxArray *plhs[], const mxArray *prhs[] ); };
class CMD_createsignal : public Command { void execute( mxArray *plhs[], const mxArray *prhs[] ); };
class CMD_newsignal : public Command { void execute( mxArray *plhs[], const mxArray *prhs[] ); };
class CMD_recduration : public Command { void execute( mxArray *plhs[], const mxArray *prhs[] ); };
class CMD_eventconfig : public Command { void execute( mxArray *plhs[], const mxArray *prhs[] ); };
class CMD_addsample : public Command { void execute( mxArray *plhs[], const mxArray *prhs[] ); };
class CMD_addrawsample : public Command { void execute( mxArray *plhs[], const mxArray *prhs[] ); };
class CMD_addsamplevector : public Command { void execute( mxArray *plhs[], const mxArray *prhs[] ); };
class CMD_blitsamples : public Command { void execute( mxArray *plhs[], const mxArray *prhs[] ); };
class CMD_blitrawsamples : public Command { void execute( mxArray *plhs[], const mxArray *prhs[] ); };
class CMD_mode1event : public Command { void execute( mxArray *plhs[], const mxArray *prhs[] ); };
class CMD_mode3event : public Command { void execute( mxArray *plhs[], const mxArray *prhs[] ); };
class CMD_open : public Command { void execute( mxArray *plhs[], const mxArray *prhs[] ); };
class CMD_close : public Command { void execute( mxArray *plhs[], const mxArray *prhs[] ); };
// ===================================================================================================
// mexFunction
// ===================================================================================================
CmexObject CmexObject::instance;
void mexFunction( int nlhs, mxArray *plhs[], int nrhs, const mxArray *prhs[] )
{
CmexObject::getInstance( ).execute( nlhs, plhs, nrhs, prhs );
}
// ===================================================================================================
// CmexObject Definition
// ===================================================================================================
CmexObject::CmexObject( )
{
commands.registerCommand( "Init", new CMD_init( ), 1, 0 );
commands.registerCommand( "Clear", new CMD_clear( ), 0, 1 );
commands.registerCommand( "Clear All", new CMD_clearall( ), 0, 0 );
commands.registerCommand( "CreateSignal", new CMD_createsignal( ), 0, 2 );
commands.registerCommand( "NewSignal", new CMD_newsignal( ), 1, 3 );
commands.registerCommand( "Open", new CMD_open( ), 0, 2 );
commands.registerCommand( "Close", new CMD_close( ), 0, 1 );
commands.registerCommand( "GetHeader", new CMD_getheader( ), 1, 1 );
commands.registerCommand( "SetHeader", new CMD_setheader( ), 0, 2 );
commands.registerCommand( "RecordDuration", new CMD_recduration( ), 0, 2 );
commands.registerCommand( "EventConfig", new CMD_eventconfig( ), 0, 3 );
commands.registerCommand( "AddSample", new CMD_addsample( ), 0, 3 );
commands.registerCommand( "AddRawSample", new CMD_addrawsample( ), 0, 3 );
commands.registerCommand( "AddVecSample", new CMD_addsamplevector( ), 0, 3 );
commands.registerCommand( "BlitSamples", new CMD_blitsamples( ), 0, 3 );
commands.registerCommand( "BlitRawSamples", new CMD_blitrawsamples( ), 0, 3 );
commands.registerCommand( "Mode1Ev", new CMD_mode1event( ), 0, 3 );
commands.registerCommand( "Mode3Ev", new CMD_mode3event( ), 0, 5 );
}
CmexObject::~CmexObject( )
{
}
void CmexObject::execute( size_t nlhs, mxArray *plhs[], size_t nrhs, const mxArray *prhs[] )
{
if( nrhs < 1 )
throw std::invalid_argument( "Expecting at least one argument." );
if( !mxIsChar(prhs[0]) )
throw std::invalid_argument( "First argument must be a command (string)." );
char *command;
command = new char[32];
if( mxGetString( prhs[0], command, 32 ) != 0 )
throw std::invalid_argument( "Unknown problem with command string." );
commands.execute( command, nlhs, plhs, nrhs-1, prhs+1 );
delete[] command;
}
// ===================================================================================================
// Command Definitions
// ===================================================================================================
void CMD_init::execute( mxArray *plhs[], const mxArray ** /*prhs*/ )
{
size_t handle = CmexObject::getInstance().writers.newInstance( );
plhs[0] = mxCreateNumericMatrix( 1, 1, mxUINT64_CLASS, mxREAL );
*reinterpret_cast<size_t*>(mxGetData( plhs[0] )) = handle;
}
void CMD_clear::execute( mxArray ** /*plhs*/, const mxArray *prhs[] )
{
size_t handle = mx::getNumeric<size_t>( prhs[0] );
CmexObject::getInstance().writers.remove( handle );
}
void CMD_clearall::execute( mxArray ** /*plhs*/, const mxArray ** /*prhs*/ )
{
CmexObject::getInstance().writers.clear( );
}
void CMD_getheader::execute( mxArray *plhs[], const mxArray *prhs[] )
{
size_t handle = mx::getNumeric<size_t>( prhs[0] );
gdf::Writer *w = CmexObject::getInstance().writers.get( handle );
plhs[0] = constructHeaderStruct( w->getNumSignals( ) );
Header2Struct( plhs[0], &w->getHeaderAccess_readonly() );
}
void CMD_setheader::execute( mxArray ** /*plhs*/, const mxArray *prhs[] )
{
size_t handle = mx::getNumeric<size_t>( prhs[0] );
gdf::Writer *w = CmexObject::getInstance().writers.get( handle );
Struct2Header( prhs[1], &w->getHeaderAccess( ) );
}
void CMD_createsignal::execute( mxArray ** /*plhs*/, const mxArray *prhs[] )
{
size_t handle = mx::getNumeric<size_t>( prhs[0] );
gdf::Writer *w = CmexObject::getInstance().writers.get( handle );
size_t channel = mx::getNumeric<size_t>( prhs[1] );
if( channel < 1 )
throw std::invalid_argument( "Channel index must be >= 1." );
w->createSignal( channel - 1, true );
}
void CMD_newsignal::execute( mxArray *plhs[], const mxArray *prhs[] )
{
size_t handle = mx::getNumeric<size_t>( prhs[0] );
gdf::uint32 type = mx::getNumeric<gdf::uint32>( prhs[1] );
gdf::uint32 fs = mx::getNumeric<gdf::uint32>( prhs[2] );
gdf::Writer *w = CmexObject::getInstance().writers.get( handle );
size_t channel = w->getFirstFreeSignalIndex( );
w->createSignal( channel, true );
plhs[0] = mxCreateNumericMatrix( 1, 1, mxUINT64_CLASS, mxREAL );
*reinterpret_cast<size_t*>(mxGetData( plhs[0] )) = channel + 1;
w->getSignalHeader(channel).set_datatype( type );
w->getSignalHeader(channel).set_samplerate( fs );
}
void CMD_recduration::execute( mxArray ** /*plhs[]*/, const mxArray *prhs[] )
{
size_t handle = mx::getNumeric<size_t>( prhs[0] );
gdf::Writer *w = CmexObject::getInstance().writers.get( handle );
double recdur = mx::getNumeric<double>( prhs[1] );
if( recdur == 0 || !isfinite(recdur) )
w->getHeaderAccess( ).enableAutoRecordDuration( );
else
{
gdf::uint32 num = boost::numeric_cast<gdf::uint32>( trunc(recdur) );
gdf::uint32 den = 1;
while( recdur*den - num != 0 )
{
cout << num << "/" << den << endl;
den *= 10;
num = boost::numeric_cast<gdf::uint32>( trunc(recdur*den) );
}
w->getHeaderAccess( ).setRecordDuration( num, den );
}
}
void CMD_eventconfig::execute( mxArray ** /*plhs*/, const mxArray *prhs[] )
{
size_t handle = mx::getNumeric<size_t>( prhs[0] );
gdf::Writer *w = CmexObject::getInstance().writers.get( handle );
gdf::uint8 mode = mx::getNumeric<gdf::uint8>( prhs[1] );
gdf::float32 fs = mx::getNumeric<gdf::float32>( prhs[2] );
w->setEventMode( mode );
w->setEventSamplingRate( fs );
}
void CMD_addsample::execute( mxArray ** /*plhs*/, const mxArray *prhs[] )
{
size_t handle = mx::getNumeric<size_t>( prhs[0] );
gdf::Writer *w = CmexObject::getInstance().writers.get( handle );
size_t channel_idx = mx::getNumeric<size_t>( prhs[1] );
double value = mx::getNumeric<double>( prhs[2] );
w->addSamplePhys( channel_idx-1, value );
}
void CMD_addrawsample::execute( mxArray ** /*plhs*/, const mxArray *prhs[] )
{
size_t handle = mx::getNumeric<size_t>( prhs[0] );
gdf::Writer *w = CmexObject::getInstance().writers.get( handle );
size_t channel_idx = mx::getNumeric<size_t>( prhs[1] );
double value = mx::getNumeric<double>( prhs[2] );
w->addSampleRaw( channel_idx-1, value );
}
void CMD_addsamplevector::execute( mxArray ** /*plhs*/, const mxArray *prhs[] )
{
size_t handle = mx::getNumeric<size_t>( prhs[0] );
gdf::Writer *w = CmexObject::getInstance().writers.get( handle );
size_t first_channel = mx::getNumeric<size_t>( prhs[1] ) - 1;
std::vector<double> vals = mx::getNumericArray<double>( prhs[2] );
for( size_t i=0; i<vals.size(); i++ )
w->addSamplePhys( first_channel+i, vals[i] );
}
void CMD_blitsamples::execute( mxArray ** /*plhs*/, const mxArray *prhs[] )
{
size_t handle = mx::getNumeric<size_t>( prhs[0] );
gdf::Writer *w = CmexObject::getInstance().writers.get( handle );
size_t channel_idx = mx::getNumeric<size_t>( prhs[1] );
std::vector<double> vals = mx::getNumericArray<double>( prhs[2] );
w->blitSamplesPhys( channel_idx-1, vals );
}
void CMD_blitrawsamples::execute( mxArray ** /*plhs*/, const mxArray *prhs[] )
{
size_t handle = mx::getNumeric<size_t>( prhs[0] );
gdf::Writer *w = CmexObject::getInstance().writers.get( handle );
size_t channel_idx = mx::getNumeric<size_t>( prhs[1] );
std::vector<double> vals = mx::getNumericArray<double>( prhs[2] );
w->blitSamplesRaw( channel_idx-1, vals );
}
void CMD_mode1event::execute( mxArray ** /*plhs*/, const mxArray *prhs[] )
{
size_t handle = mx::getNumeric<size_t>( prhs[0] );
gdf::Writer *w = CmexObject::getInstance().writers.get( handle );
gdf::uint32 pos = mx::getNumeric<gdf::uint32>( prhs[1] );
gdf::uint16 type = mx::getNumeric<gdf::uint16>( prhs[2] );
w->addEvent( pos, type );
}
void CMD_mode3event::execute( mxArray ** /*plhs*/, const mxArray *prhs[] )
{
size_t handle = mx::getNumeric<size_t>( prhs[0] );
gdf::Writer *w = CmexObject::getInstance().writers.get( handle );
gdf::uint32 pos = mx::getNumeric<gdf::uint32>( prhs[1] );
gdf::uint16 type = mx::getNumeric<gdf::uint16>( prhs[2] );
gdf::uint16 chan = mx::getNumeric<gdf::uint16>( prhs[3] );
gdf::uint32 dur = mx::getNumeric<gdf::uint32>( prhs[4] );
w->addEvent( pos, type, chan, dur );
}
void CMD_open::execute( mxArray ** /*plhs*/, const mxArray *prhs[] )
{
size_t handle = mx::getNumeric<size_t>( prhs[0] );
gdf::Writer *w = CmexObject::getInstance().writers.get( handle );
std::string filename = mx::getString( prhs[1] );
w->open( filename );
}
void CMD_close::execute( mxArray ** /*plhs*/, const mxArray *prhs[] )
{
size_t handle = mx::getNumeric<size_t>( prhs[0] );
gdf::Writer *w = CmexObject::getInstance().writers.get( handle );
w->close( );
}
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