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Source: libgkarrays
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Andreas Tille <tille@debian.org>
Section: science
Priority: optional
Build-Depends: debhelper (>= 11~),
d-shlibs,
zlib1g-dev
Standards-Version: 4.1.5
Vcs-Browser: https://salsa.debian.org/med-team/libgkarrays
Vcs-Git: https://salsa.debian.org/med-team/libgkarrays.git
Homepage: http://crac.gforge.inria.fr/gkarrays/
Package: libgkarrays1
Architecture: any
Section: libs
Depends: ${shlibs:Depends},
${misc:Depends}
Description: library to query large collection of NGS sequences
Gk-arrays are provided as a simple-to-use C++ library dedicated to
queries on large collection of sequences as produced by high-throughput
sequencers (e.g. HiSeq 2000 from Illumina, 454 from Roche).
.
Gk-arrays index k-mers of reads and allows one to answer different queries
on that read collection (e.g. how many reads share this k-mer? where does
this k-mer occur in the read collection?).
.
Gk-arrays consist of a space-efficient alternative to hash tables while
being similar in terms of query times.
Package: libgkarrays-dev
Architecture: any
Section: libdevel
Depends: ${shlibs:Depends},
${misc:Depends},
libgkarrays1 (= ${binary:Version})
Description: library to query large collection of NGS sequences (development)
Gk-arrays are provided as a simple-to-use C++ library dedicated to
queries on large collection of sequences as produced by high-throughput
sequencers (e.g. HiSeq 2000 from Illumina, 454 from Roche).
.
Gk-arrays index k-mers of reads and allows one to answer different queries
on that read collection (e.g. how many reads share this k-mer? where does
this k-mer occur in the read collection?).
.
Gk-arrays consist of a space-efficient alternative to hash tables while
being similar in terms of query times.
.
This is the development library for libgkarrays.
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