File: gsnap-output-single-qual-del.gsnap

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libgoby-java 3.3.1%2Bdfsg2-11
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>CTGGATCTGTTAAGCCTTACACTTAGTCCCCGCCCTCGGAAGTAAGGGCCTGTCATTCTGTAAAGGGACGCAGCCACACGCAGAGAAGGTGGAGGTCTCCA	1	B8@=DCDDDDEEE=EEE@EEDDDDDC>@@DE<E@E4@?4>AD?=A;78A?AD=DDEDE?CCA?DCE@BFC>0???8>>@6EBEDC>@A?)@>;>BADEEE#	30283
 tTGGATCTGTTAAGCCTTACACa-------------------------------------------------------------------------------	2..22	+17:15405658..15405678	start:1..del:1,matches:21,sub:0	segs:2,align_score:3,mapq:37
,----------------------TTAGTCCCCGCCCTCGGAAGTAAGGGCCTGTCATTCTGTAAAGGGACGCAGCCACACGCAGAGAAGGTGGAGGTCTCCA	23..101	+17:15405680..15405758	del:1..end:0,matches:79,sub:0