File: gsnap-paired-multi.gsnap

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libgoby-java 3.3.1%2Bdfsg2-11
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>CCAATTTTAATAAAAGGTGCACAAGCACAGTATGTCCCTTGGCCTACATTG	3 concordant	@?@DDDDDDFD:DFAFF:CFCEH@F;CEFC:CFCCFGFCFAFIFCF@@?FF	29
 CCAATTTTAATAAAAGGTGCACAAGCACAGTATGTCCCTTGGCCTACATTG	1..51	-23:17046528..17046478	start:0..end:0,matches:51,sub:0	segs:1,align_score:0,mapq:2	pair_score:1,insert_length:108
 CCAATTTTAATAAAAGGTGCACAAGCACAGTATGTCCCTTGGCCTACATTG	1..51	-8:40146388..40146338	start:0..end:0,matches:51,sub:0	segs:1,align_score:0,mapq:2	pair_score:1,insert_length:108
 CCAATTTTAATAAAAGGTGCACAAGCACAGTATGTCCCTTGGCCTACATTG	1..51	-4:37579708..37579658	start:0..end:0,matches:51,sub:0	segs:1,align_score:0,mapq:2	pair_score:1,insert_length:108

<CCACTTTGCTGCCCCCTCATGGATGTTTGGGAGCCTAGCAATCAAACCCTT	3 concordant	@@@FDFFFHFHGDEGADFEHGGGH<<A>DAG@?GGFC@*?4?DGDHGEGG8	29
 CCACTTTGCTGCCCCCTCATGGATGTTTGGGAGCCTAGCAATCAAACCCTc	1..50	+23:17046421..17046470	start:0..end:1,matches:50,sub:0	segs:1,align_score:1,mapq:2	pair_score:1,insert_length:108
 CCACTTTGCTGCCCCCTCATGGATGTTTGGGAGCCTAGCAATCAAACCCTc	1..50	+8:40146281..40146330	start:0..end:1,matches:50,sub:0	segs:1,align_score:1,mapq:2	pair_score:1,insert_length:108
 CCACTTTGCTGCCCCCTCATGGATGTTTGGGAGCCTAGCAATCAAACCCTc	1..50	+4:37579601..37579650	start:0..end:1,matches:50,sub:0	segs:1,align_score:1,mapq:2	pair_score:1,insert_length:108