File: splice-antisense.gsnap

package info (click to toggle)
libgoby-java 3.3.1%2Bdfsg2-11
  • links: PTS, VCS
  • area: main
  • in suites: forky, sid, trixie
  • size: 58,108 kB
  • sloc: java: 78,105; cpp: 5,011; xml: 3,170; python: 2,108; sh: 1,575; ansic: 277; makefile: 114
file content (3 lines) | stat: -rw-r--r-- 902 bytes parent folder | download | duplicates (2)
1
2
3
>TTCAGGAGTTGCCCTACGCGCAGCAGCTCCTTCTCCACCTGGTCCAGCTTCTTCTCCTTAGATGCAGCAGAGTACAGGGCGGTTGCATAGCGGCCTTCGAT	1	CCCFFFFFHHHHHJJJJJIIJIJJIJJJJJJJJJJIIIJJJJJJJJJJJIJJJJHHHHHHFFFFFC@C@E>;(;ACDDBDDD9@BD>CCDCDBDB@CAA<@	30016
 TTCAGGAGTTGct----------------------------------------------------------------------------------------	1..11	+193:91927217..91927227	start:0..acceptor:1.00,matches:11,sub:0,dir:antisense,splice_type:consistent,splice_dist_2:1916,label_2:ENSMUST00000154661.exon4/4|ENSMUST00000139277.exon4/7|ENSMUST00000023677.exon4/7	segs:2,align_score:0,mapq:40
,---------acCCCTACGCGCAGCAGCTCCTTCTCCACCTGGTCCAGCTTCTTCTCCTTAGATGCAGCAGAGTACAGGGCGGTTGCATAGCGGCCTTCGAT	12..101	+193:91929144..91929233	donor:0.98..end:0,matches:90,sub:0,dir:antisense,splice_type:consistent,splice_dist_1:1916,label_1:ENSMUST00000154661.exon3/4|ENSMUST00000155452.exon3/6|ENSMUST00000139277.exon3/7|ENSMUST00000023677.exon3/7