File: splice-sense.gsnap

package info (click to toggle)
libgoby-java 3.3.1%2Bdfsg2-11
  • links: PTS, VCS
  • area: main
  • in suites: forky, sid, trixie
  • size: 58,108 kB
  • sloc: java: 78,105; cpp: 5,011; xml: 3,170; python: 2,108; sh: 1,575; ansic: 277; makefile: 114
file content (3 lines) | stat: -rw-r--r-- 819 bytes parent folder | download | duplicates (2)
1
2
3
>TGCAGCTTCCTGCCAGACCCTTACCAGAAGCAGTGCGATGACTTTGTGGCTGAGTATGAGCCCTTGCTATTGGAGATCCTCGTGGAAGTGATGGATCCTGG	1	1??DD3DDABD>DBCA@DGGHHGHIIGHGEGGCD940)8?BB*9?G*9?DD78;))8C)8).;;D;=?;;?);??##########################	30006
 TGCAGCTTCCTGCCAGACCCTTACCAGAAGCAGgt------------------------------------------------------------------	1..33	+200:59763021..59763053	start:0..donor:1.00,matches:33,sub:0,dir:sense,splice_type:consistent,splice_dist_2:232,label_2:ENSMUST00000004316.exon12/15|ENSMUST00000105465.exon11/14	segs:2,align_score:0,mapq:40
,-------------------------------agTGCGATGACTTTGTGGCTGAGTATGAGCCCTTGCTATTGGAGATCCTCGTGGAAGTGATGGATCCTGG	34..101	+200:59763286..59763353	acceptor:1.00..end:0,matches:68,sub:0,dir:sense,splice_type:consistent,splice_dist_1:232,label_1:ENSMUST00000004316.exon13/15|ENSMUST00000105465.exon12/14