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package org.campagnelab.goby.modes;
import org.junit.Ignore;
import org.junit.Test;
import java.io.File;
import static org.junit.Assert.*;
/**
* Created by fac2003 on 5/10/16.
*/
public class ConcatenateAlignmentModeTest {
@Ignore
@Test
public void execute() throws Exception {
ConcatenateAlignmentMode concatMode = new ConcatenateAlignmentMode();
concatMode.configure("--mode ca test-data/bam/Example.bam test-data/bam/Example2.bam -o test-results/dup".split(" "));
concatMode.execute();
assertTrue(new File("test-results/dup.entries").exists());
}
}
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