File: example-small.vcf

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libgoby-java 3.3.1%2Bdfsg2-12
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##fileformat=VCFv4.1
##samtoolsVersion=0.1.14 (r933:170)
##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
##FORMAT=<ID=GQ,Number=1,Type=Integer,Description="Genotype Quality">
##FORMAT=<ID=GL,Number=3,Type=Float,Description="Likelihoods for RR,RA,AA genotypes (R=ref,A=alt)">
##FORMAT=<ID=DP,Number=1,Type=Integer,Description="# high-quality bases">
##FORMAT=<ID=SP,Number=1,Type=Integer,Description="Phred-scaled strand bias P-value">
##FORMAT=<ID=PL,Number=-1,Type=Integer,Description="List of Phred-scaled genotype likelihoods, number of values is (#ALT+1)*(#ALT+2)/2">
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	FORMAT	results/IPBKRNW/IPBKRNW-replicate.bam	results/IPBKRNW/IPBKRNW-sorted.bam
0	145497099	.	A	G	17.1	.	GT:PL:GQ	1/1:015,4,0:11	1/1:25,3,0:42
1	29389393	.	AC	A	31.5	.	GT:PL:GQ	1/1:36,3,0:42	1/1:36,3,0:42