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|
#! /bin/sh /usr/share/dpatch/dpatch-run
## 02_hdf5.dpatch by <gerber@hamburg.upc.es>
##
## All lines beginning with `## DP:' are a description of the patch.
## DP: Adapted Hdf5 calls to libhsd5-1.8 API
@DPATCH@
diff -urNad '--exclude=CVS' '--exclude=.svn' '--exclude=.git' '--exclude=.arch' '--exclude=.hg' '--exclude=_darcs' '--exclude=.bzr' libgpiv-0.6.1~/lib/img.c libgpiv-0.6.1/lib/img.c
--- libgpiv-0.6.1~/lib/img.c 2012-02-01 10:44:11.000000000 +0100
+++ libgpiv-0.6.1/lib/img.c 2012-02-01 11:05:41.000000000 +0100
@@ -537,8 +537,11 @@
}
file_id = H5Fopen (fname, H5F_ACC_RDONLY, H5P_DEFAULT);
- group_id = H5Gopen (file_id, "IMAGE");
- H5Aiterate (group_id, NULL, (H5A_operator_t) attr_info, image_par);
+ group_id = H5Gopen (file_id, "IMAGE", H5P_DEFAULT);
+ H5Aiterate (group_id, H5_INDEX_CRT_ORDER, H5_ITER_NATIVE, 0,
+ (H5A_operator_t)attr_info, image_par);
+
+
status = H5Gclose (group_id);
status = H5Fclose (file_id);
@@ -587,7 +590,7 @@
}
file_id = H5Fopen (fname, H5F_ACC_RDWR, H5P_DEFAULT);
- group_id = H5Gopen (file_id, "IMAGE");
+ group_id = H5Gopen (file_id, "IMAGE", H5P_DEFAULT);
@@ -602,7 +605,7 @@
if (image_par->ncolumns__set) {
attribute_id = H5Acreate (group_id, GPIV_IMGPAR_KEY__NCOLUMNS,
H5T_NATIVE_INT,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite(attribute_id, H5T_NATIVE_INT,
&image_par->ncolumns);
status = H5Aclose (attribute_id);
@@ -611,7 +614,7 @@
if (image_par->nrows__set) {
attribute_id = H5Acreate (group_id, GPIV_IMGPAR_KEY__NROWS,
H5T_NATIVE_INT,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite (attribute_id, H5T_NATIVE_INT,
&image_par->nrows);
status = H5Aclose (attribute_id);
@@ -620,7 +623,7 @@
if (image_par->x_corr__set) {
attribute_id = H5Acreate (group_id, GPIV_IMGPAR_KEY__X_CORR,
H5T_NATIVE_INT,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite (attribute_id, H5T_NATIVE_INT,
&image_par->x_corr);
status = H5Aclose (attribute_id);
@@ -629,7 +632,7 @@
if (image_par->depth__set) {
attribute_id = H5Acreate (group_id, GPIV_IMGPAR_KEY__DEPTH,
H5T_NATIVE_INT,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite (attribute_id, H5T_NATIVE_INT,
&image_par->depth);
status = H5Aclose (attribute_id);
@@ -641,7 +644,7 @@
if (image_par->s_scale__set) {
attribute_id = H5Acreate (group_id, GPIV_IMGPAR_KEY__S_SCALE,
H5T_NATIVE_FLOAT,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite (attribute_id, H5T_NATIVE_FLOAT,
&image_par->s_scale);
status = H5Aclose (attribute_id);
@@ -650,7 +653,7 @@
if (image_par->t_scale__set) {
attribute_id = H5Acreate (group_id, GPIV_IMGPAR_KEY__T_SCALE,
H5T_NATIVE_FLOAT,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite (attribute_id, H5T_NATIVE_FLOAT,
&image_par->t_scale);
status = H5Aclose (attribute_id);
@@ -659,7 +662,7 @@
if (image_par->z_off_x__set) {
attribute_id = H5Acreate (group_id, GPIV_IMGPAR_KEY__Z_OFF_X,
H5T_NATIVE_FLOAT,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite (attribute_id, H5T_NATIVE_FLOAT,
&image_par->z_off_x);
status = H5Aclose (attribute_id);
@@ -668,7 +671,7 @@
if (image_par->z_off_y__set) {
attribute_id = H5Acreate (group_id, GPIV_IMGPAR_KEY__Z_OFF_Y,
H5T_NATIVE_FLOAT,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite (attribute_id, H5T_NATIVE_FLOAT,
&image_par->z_off_y);
status = H5Aclose (attribute_id);
@@ -685,7 +688,7 @@
atype = H5Tcopy (H5T_C_S1);
H5Tset_size (atype, GPIV_MAX_CHARS);
attribute_id = H5Acreate (group_id, GPIV_IMGPAR_KEY__TITLE, atype,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite (attribute_id, atype,
&image_par->title);
status = H5Aclose (attribute_id);
@@ -697,7 +700,7 @@
atype = H5Tcopy (H5T_C_S1);
H5Tset_size (atype, GPIV_MAX_CHARS);
attribute_id = H5Acreate (group_id, GPIV_IMGPAR_KEY__CREATION_DATE, atype,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite (attribute_id, atype,
&image_par->creation_date);
status = H5Aclose (attribute_id);
@@ -709,7 +712,7 @@
atype = H5Tcopy (H5T_C_S1);
H5Tset_size (atype, GPIV_MAX_CHARS);
attribute_id = H5Acreate (group_id, GPIV_IMGPAR_KEY__LOCATION, atype,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite (attribute_id, atype,
&image_par->location);
status = H5Aclose (attribute_id);
@@ -721,7 +724,7 @@
atype = H5Tcopy (H5T_C_S1);
H5Tset_size (atype, GPIV_MAX_CHARS);
attribute_id = H5Acreate (group_id, GPIV_IMGPAR_KEY__AUTHOR, atype,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite (attribute_id, atype,
&image_par->author);
status = H5Aclose (attribute_id);
@@ -733,7 +736,7 @@
atype = H5Tcopy (H5T_C_S1);
H5Tset_size (atype, GPIV_MAX_CHARS);
attribute_id = H5Acreate (group_id, GPIV_IMGPAR_KEY__SOFTWARE, atype,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite (attribute_id, atype,
&image_par->software);
status = H5Aclose (attribute_id);
@@ -745,7 +748,7 @@
atype = H5Tcopy (H5T_C_S1);
H5Tset_size (atype, GPIV_MAX_CHARS);
attribute_id = H5Acreate (group_id, GPIV_IMGPAR_KEY__SOURCE, atype,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite (attribute_id, atype,
&image_par->source);
status = H5Aclose (attribute_id);
@@ -757,7 +760,7 @@
atype = H5Tcopy (H5T_C_S1);
H5Tset_size (atype, GPIV_MAX_CHARS);
attribute_id = H5Acreate (group_id, GPIV_IMGPAR_KEY__USERTEXT, atype,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite (attribute_id, atype,
&image_par->usertext);
status = H5Aclose (attribute_id);
@@ -769,7 +772,7 @@
atype = H5Tcopy (H5T_C_S1);
H5Tset_size (atype, GPIV_MAX_CHARS);
attribute_id = H5Acreate (group_id, GPIV_IMGPAR_KEY__WARNING, atype,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite (attribute_id, atype,
&image_par->warning);
status = H5Aclose (attribute_id);
@@ -781,7 +784,7 @@
atype = H5Tcopy (H5T_C_S1);
H5Tset_size (atype, GPIV_MAX_CHARS);
attribute_id = H5Acreate (group_id, GPIV_IMGPAR_KEY__DISCLAIMER, atype,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite (attribute_id, atype,
&image_par->disclaimer);
status = H5Aclose (attribute_id);
@@ -793,7 +796,7 @@
atype = H5Tcopy (H5T_C_S1);
H5Tset_size (atype, GPIV_MAX_CHARS);
attribute_id = H5Acreate (group_id, GPIV_IMGPAR_KEY__COMMENT, atype,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite (attribute_id, atype,
&image_par->comment);
status = H5Aclose (attribute_id);
@@ -807,7 +810,7 @@
atype = H5Tcopy (H5T_C_S1);
H5Tset_size (atype, GPIV_MAX_CHARS);
attribute_id = H5Acreate (group_id, GPIV_IMGPAR_KEY__COPYRIGHT, atype,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite (attribute_id, atype,
&image_par->copyright);
status = H5Aclose (attribute_id);
@@ -820,7 +823,7 @@
atype = H5Tcopy (H5T_C_S1);
H5Tset_size (atype, GPIV_MAX_CHARS);
attribute_id = H5Acreate (group_id, GPIV_IMGPAR_KEY__EMAIL, atype,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite (attribute_id, atype,
&image_par->email);
status = H5Aclose (attribute_id);
@@ -832,7 +835,7 @@
atype = H5Tcopy (H5T_C_S1);
H5Tset_size (atype, GPIV_MAX_CHARS);
attribute_id = H5Acreate (group_id, GPIV_IMGPAR_KEY__URL, atype,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite (attribute_id, atype,
&image_par->url);
status = H5Aclose (attribute_id);
diff -urNad '--exclude=CVS' '--exclude=.svn' '--exclude=.git' '--exclude=.arch' '--exclude=.hg' '--exclude=_darcs' '--exclude=.bzr' libgpiv-0.6.1~/lib/io_hdf.c libgpiv-0.6.1/lib/io_hdf.c
--- libgpiv-0.6.1~/lib/io_hdf.c 2012-02-01 10:44:11.000000000 +0100
+++ libgpiv-0.6.1/lib/io_hdf.c 2012-02-01 11:07:27.000000000 +0100
@@ -129,15 +129,16 @@
return err_msg;
}
- group_id = H5Gcreate (file_id, "IMAGE", 0);
+ group_id = H5Gcreate (file_id, "IMAGE", H5P_DEFAULT /* lcpl_id */, H5P_DEFAULT /* gcpl_id */, H5P_DEFAULT /*gapl_id*/);
+
status = H5Gclose (group_id);
- group_id = H5Gcreate (file_id, "POSITIONS", 0);
+ group_id = H5Gcreate (file_id, "POSITIONS", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
status = H5Gclose (group_id);
- group_id = H5Gcreate (file_id, "PIV", 0);
+ group_id = H5Gcreate (file_id, "PIV", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
status = H5Gclose (group_id);
/* group_id = H5Gcreate (file_id, "VECTORS", 0); */
/* status = H5Gclose (group_id); */
- group_id = H5Gcreate (file_id, "SCALARS", 0);
+ group_id = H5Gcreate (file_id, "SCALARS", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
status = H5Gclose (group_id);
status = H5Fclose(file_id);
@@ -208,13 +209,13 @@
file_id = H5Fopen(fname, H5F_ACC_RDONLY, H5P_DEFAULT);
- group_id = H5Gopen (file_id, "IMAGE");
+ group_id = H5Gopen (file_id, "IMAGE", H5P_DEFAULT);
/*
* image #1
*/
- dataset_id = H5Dopen (group_id, "#1");
+ dataset_id = H5Dopen (group_id, "#1", H5P_DEFAULT);
dataspace_id = H5Dget_space (dataset_id);
#ifdef HD5_IMAGE_INT
if ((status = H5Dread (dataset_id, H5T_NATIVE_INT, H5S_ALL, H5S_ALL,
@@ -240,7 +241,7 @@
* image #2
*/
if (gpiv_image->header->x_corr) {
- dataset_id = H5Dopen(group_id, "#2");
+ dataset_id = H5Dopen(group_id, "#2", H5P_DEFAULT);
dataspace_id = H5Dget_space(dataset_id);
#ifdef HD5_IMAGE_INT
status = H5Dread(dataset_id, H5T_NATIVE_INT, H5S_ALL, H5S_ALL,
@@ -304,7 +305,7 @@
return err_msg;
}
file_id = H5Fopen(fname, H5F_ACC_RDWR, H5P_DEFAULT);
- group_id = H5Gopen (file_id, "IMAGE");
+ group_id = H5Gopen (file_id, "IMAGE", H5P_DEFAULT);
/* H5Gset_comment (group_id, ".", RCSID); */
/*
@@ -316,7 +317,7 @@
atype = H5Tcopy(H5T_C_S1);
H5Tset_size(atype, 5);
attribute_id = H5Acreate(group_id, "CLASS", atype,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite(attribute_id, atype,
"IMAGE");
status = H5Aclose(attribute_id);
@@ -327,7 +328,7 @@
atype = H5Tcopy(H5T_C_S1);
H5Tset_size(atype, 15);
attribute_id = H5Acreate(group_id, "SUBCLASS", atype,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite(attribute_id, atype,
"IMAGE_GRAYSCALE");
status = H5Aclose(attribute_id);
@@ -336,7 +337,7 @@
dataspace_id = H5Screate_simple(1, dims, NULL);
attribute_id = H5Acreate(group_id, "IMAGE_WHITE_IS_ZERO",
- H5T_NATIVE_USHORT, dataspace_id, H5P_DEFAULT);
+ H5T_NATIVE_USHORT, dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite(attribute_id, H5T_NATIVE_USHORT, &image_white_is_zero);
status = H5Aclose(attribute_id);
status = H5Sclose(dataspace_id);
@@ -346,7 +347,7 @@
atype = H5Tcopy(H5T_C_S1);
H5Tset_size(atype, 3);
attribute_id = H5Acreate(group_id, "IMAGE_VERSION", atype,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite(attribute_id, atype,
"1.2");
status = H5Aclose(attribute_id);
@@ -366,12 +367,12 @@
*/
#ifdef HD5_IMAGE_INT
dataset_id = H5Dcreate (group_id, "#1", H5T_NATIVE_INT,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
status = H5Dwrite (dataset_id, H5T_NATIVE_INT, H5S_ALL, H5S_ALL,
H5P_DEFAULT, image->frame1[0][0]);
#else
/* dataset_id = H5Dcreate (group_id, "#1", H5T_NATIVE_USHORT, */
-/* dataspace_id, H5P_DEFAULT); */
+/* dataspace_id, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); */
/* status = H5Dwrite (dataset_id, H5T_NATIVE_USHORT, H5S_ALL, H5S_ALL, */
/* H5P_DEFAULT, image->frame1[0][0]); */
#endif
@@ -384,12 +385,12 @@
if (image->header->x_corr) {
#ifdef HD5_IMAGE_INT
dataset_id = H5Dcreate(group_id, "#2", H5T_NATIVE_INT,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
status = H5Dwrite(dataset_id, H5T_NATIVE_INT, H5S_ALL, H5S_ALL,
H5P_DEFAULT, &image->frame2[0][0]);
#else
/* dataset_id = H5Dcreate(group_id, "#2", H5T_NATIVE_USHORT, */
-/* dataspace_id, H5P_DEFAULT); */
+/* dataspace_id, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); */
/* status = H5Dwrite(dataset_id, H5T_NATIVE_USHORT, H5S_ALL, H5S_ALL, */
/* H5P_DEFAULT, &image->frame2[0][0]); */
#endif
@@ -635,15 +636,15 @@
return err_msg;
}
file_id = H5Fopen(fname, H5F_ACC_RDONLY, H5P_DEFAULT);
- group_data = H5Gopen (file_id, "SCALARS");
- group_id = H5Gopen (group_data, DATA_KEY);
+ group_data = H5Gopen (file_id, "SCALARS", H5P_DEFAULT);
+ group_id = H5Gopen (group_data, DATA_KEY, H5P_DEFAULT);
H5Gget_comment (group_id, ".", GPIV_MAX_CHARS, RCSID);
klass->comment = g_strdup (RCSID);
/*
* centre
*/
- dataset_id = H5Dopen(group_id, "centre");
+ dataset_id = H5Dopen(group_id, "centre", H5P_DEFAULT);
dataspace_id = H5Dget_space(dataset_id);
status = H5Dread(dataset_id, H5T_NATIVE_FLOAT, H5S_ALL, H5S_ALL,
H5P_DEFAULT, klass->centre);
@@ -653,7 +654,7 @@
/*
* count
*/
- dataset_id = H5Dopen(group_id, "count");
+ dataset_id = H5Dopen(group_id, "count", H5P_DEFAULT);
dataspace_id = H5Dget_space(dataset_id);
status = H5Dread(dataset_id, H5T_NATIVE_INT, H5S_ALL, H5S_ALL,
H5P_DEFAULT, klass->count);
@@ -702,8 +703,8 @@
return err_msg;
}
file_id = H5Fopen(fname, H5F_ACC_RDWR, H5P_DEFAULT);
- group_data = H5Gopen (file_id, "SCALARS");
- group_id = H5Gopen (group_data, DATA_KEY);
+ group_data = H5Gopen (file_id, "SCALARS", H5P_DEFAULT);
+ group_id = H5Gopen (group_data, DATA_KEY, H5P_DEFAULT);
H5Gset_comment (group_id, ".", klass->comment);
/*
@@ -715,7 +716,7 @@
*/
dataspace_id = H5Screate_simple(1, dims, NULL);
dataset_id = H5Dcreate(group_id, "centre", H5T_NATIVE_FLOAT,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
status = H5Dwrite(dataset_id, H5T_NATIVE_FLOAT, H5S_ALL, H5S_ALL,
H5P_DEFAULT, &klass->centre[0]);
status = H5Dclose(dataset_id);
@@ -726,7 +727,7 @@
*/
dataspace_id = H5Screate_simple(1, dims, NULL);
dataset_id = H5Dcreate(group_id, "count", H5T_NATIVE_INT,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
status = H5Dread(dataset_id, H5T_NATIVE_INT, H5S_ALL, H5S_ALL,
H5P_DEFAULT, &klass->count[0]);
status = H5Dclose(dataset_id);
@@ -768,12 +769,12 @@
return err_msg;
}
file_id = H5Fopen(fname, H5F_ACC_RDONLY, H5P_DEFAULT);
- group_id = H5Gopen (file_id, "POSITIONS");
+ group_id = H5Gopen (file_id, "POSITIONS", H5P_DEFAULT);
/*
* getting nx
*/
- dataset_id = H5Dopen(group_id, "point_x");
+ dataset_id = H5Dopen(group_id, "point_x", H5P_DEFAULT);
dataspace_id = H5Dget_space(dataset_id);
rank_x = H5Sget_simple_extent_ndims (dataspace_id);
if (rank_x != 1) {
@@ -789,7 +790,7 @@
/*
* getting ny
*/
- dataset_id = H5Dopen(group_id, "point_y");
+ dataset_id = H5Dopen(group_id, "point_y", H5P_DEFAULT);
dataspace_id = H5Dget_space(dataset_id);
rank_y = H5Sget_simple_extent_ndims (dataspace_id);
if (rank_y != 1) {
@@ -846,7 +847,7 @@
/*
* POSITION group with RCSID comment and scale attribute
*/
- group_id = H5Gopen (file_id, "POSITIONS");
+ group_id = H5Gopen (file_id, "POSITIONS", H5P_DEFAULT);
H5Gget_comment (group_id, ".", GPIV_MAX_CHARS, RCSID);
piv_data->comment = g_strdup (RCSID);
attribute_id = H5Aopen_name(group_id, "scale");
@@ -856,7 +857,7 @@
/*
* point_x
*/
- dataset_id = H5Dopen(group_id, "point_x");
+ dataset_id = H5Dopen(group_id, "point_x", H5P_DEFAULT);
dataspace_id = H5Dget_space(dataset_id);
rank_x = H5Sget_simple_extent_ndims (dataspace_id);
if (rank_x != 1) {
@@ -876,7 +877,7 @@
/*
* point_y
*/
- dataset_id = H5Dopen(group_id, "point_y");
+ dataset_id = H5Dopen(group_id, "point_y", H5P_DEFAULT);
dataspace_id = H5Dget_space(dataset_id);
rank_y = H5Sget_simple_extent_ndims (dataspace_id);
if (rank_y != 1) {
@@ -948,12 +949,12 @@
/*
* POSITION group with RCSID comment and scale attribute
*/
- group_id = H5Gopen (file_id, "POSITIONS");
+ group_id = H5Gopen (file_id, "POSITIONS", H5P_DEFAULT);
H5Gset_comment (group_id, ".", piv_data->comment);
dims_attrib[0] = 1;
dataspace_id = H5Screate_simple(1, dims_attrib, NULL);
attribute_id = H5Acreate(group_id, "scale", H5T_NATIVE_INT,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
H5Awrite(attribute_id, H5T_NATIVE_INT, &piv_data->scale);
H5Aclose(attribute_id);
@@ -964,7 +965,7 @@
H5Tset_size (str_MC, GPIV_MAX_CHARS);
dataspace_id = H5Screate_simple(1, dims_attrib, NULL);
attribute_id = H5Acreate(group_id, "dimension", str_MC,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
if (piv_data->scale) {
H5Awrite(attribute_id, str_MC, "Positions in m");
} else {
@@ -981,7 +982,7 @@
dims[0] = piv_data->nx;
dataspace_id = H5Screate_simple(1, dims, NULL);
dataset_id = H5Dcreate(group_id, "point_x", H5T_NATIVE_FLOAT, dataspace_id,
- H5P_DEFAULT);
+ H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
status = H5Dwrite(dataset_id, H5T_NATIVE_FLOAT, H5S_ALL, H5S_ALL,
H5P_DEFAULT, point_x_hdf);
status = H5Dclose(dataset_id);
@@ -996,7 +997,7 @@
dims[0] = piv_data->ny;
dataspace_id = H5Screate_simple(1, dims, NULL);
dataset_id = H5Dcreate(group_id, "point_y", H5T_NATIVE_FLOAT,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
status = H5Dwrite(dataset_id, H5T_NATIVE_FLOAT, H5S_ALL, H5S_ALL,
H5P_DEFAULT, point_y_hdf);
status = H5Dclose(dataset_id);
@@ -1059,7 +1060,7 @@
/*
* PIV group with RCSID comment and scale attribute
*/
- group_id = H5Gopen (file_id, DATA_KEY);
+ group_id = H5Gopen (file_id, DATA_KEY, H5P_DEFAULT);
H5Gget_comment (group_id, ".", GPIV_MAX_CHARS, RCSID);
piv_data->comment = g_strdup (RCSID);
@@ -1071,7 +1072,7 @@
/*
* dx
*/
- dataset_id = H5Dopen(group_id, "dx");
+ dataset_id = H5Dopen(group_id, "dx", H5P_DEFAULT);
dataspace_id = H5Dget_space(dataset_id);
status = H5Dread(dataset_id, H5T_NATIVE_FLOAT, H5S_ALL, H5S_ALL,
H5P_DEFAULT, piv_data->dx[0]);
@@ -1081,7 +1082,7 @@
/*
* dy
*/
- dataset_id = H5Dopen(group_id, "dy");
+ dataset_id = H5Dopen(group_id, "dy", H5P_DEFAULT);
dataspace_id = H5Dget_space(dataset_id);
status = H5Dread(dataset_id, H5T_NATIVE_FLOAT, H5S_ALL, H5S_ALL,
H5P_DEFAULT, piv_data->dy[0]);
@@ -1091,7 +1092,7 @@
/*
* snr
*/
- dataset_id = H5Dopen(group_id, "snr");
+ dataset_id = H5Dopen(group_id, "snr", H5P_DEFAULT);
dataspace_id = H5Dget_space(dataset_id);
status = H5Dread(dataset_id, H5T_NATIVE_FLOAT, H5S_ALL, H5S_ALL,
H5P_DEFAULT, piv_data->snr[0]);
@@ -1101,7 +1102,7 @@
/*
* peak_no
*/
- dataset_id = H5Dopen(group_id, "peak_no");
+ dataset_id = H5Dopen(group_id, "peak_no", H5P_DEFAULT);
dataspace_id = H5Dget_space(dataset_id);
status = H5Dread(dataset_id, H5T_NATIVE_INT, H5S_ALL, H5S_ALL,
H5P_DEFAULT, piv_data->peak_no[0]);
@@ -1163,12 +1164,12 @@
/*
* PIV group with RCSID comment and scale attribute
*/
- group_id = H5Gopen (file_id, DATA_KEY);
+ group_id = H5Gopen (file_id, DATA_KEY, H5P_DEFAULT);
H5Gset_comment (group_id, ".", piv_data->comment);
dims_attrib[0] = 1;
dataspace_id = H5Screate_simple(1, dims_attrib, NULL);
attribute_id = H5Acreate(group_id, "scale", H5T_NATIVE_INT,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
H5Awrite(attribute_id, H5T_NATIVE_INT, &piv_data->scale);
H5Aclose(attribute_id);
H5Sclose(dataspace_id);
@@ -1180,7 +1181,7 @@
H5Tset_size (str_MC, GPIV_MAX_CHARS);
dataspace_id = H5Screate_simple(1, dims_attrib, NULL);
attribute_id = H5Acreate(group_id, "dimension", str_MC,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
if (piv_data->scale) {
H5Awrite(attribute_id, str_MC, "PIV estimators in m/s");
} else {
@@ -1198,7 +1199,7 @@
*/
dataspace_id = H5Screate_simple(2, dims, NULL);
dataset_id = H5Dcreate(group_id, "dx", H5T_NATIVE_FLOAT,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
status = H5Dwrite(dataset_id, H5T_NATIVE_FLOAT, H5S_ALL, H5S_ALL,
H5P_DEFAULT, &piv_data->dx[0][0]);
status = H5Dclose(dataset_id);
@@ -1209,7 +1210,7 @@
*/
dataspace_id = H5Screate_simple(2, dims, NULL);
dataset_id = H5Dcreate(group_id, "dy", H5T_NATIVE_FLOAT,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
status = H5Dwrite(dataset_id, H5T_NATIVE_FLOAT, H5S_ALL, H5S_ALL,
H5P_DEFAULT,&piv_data->dy[0][0]);
status = H5Dclose(dataset_id);
@@ -1220,7 +1221,7 @@
*/
dataspace_id = H5Screate_simple(2, dims, NULL);
dataset_id = H5Dcreate(group_id, "snr", H5T_NATIVE_FLOAT,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
status = H5Dwrite(dataset_id, H5T_NATIVE_FLOAT, H5S_ALL, H5S_ALL,
H5P_DEFAULT,&piv_data->snr[0][0]);
status = H5Dclose(dataset_id);
@@ -1231,7 +1232,7 @@
*/
dataspace_id = H5Screate_simple(2, dims, NULL);
dataset_id = H5Dcreate(group_id, "peak_no", H5T_NATIVE_INT, dataspace_id,
- H5P_DEFAULT);
+ H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
status = H5Dwrite(dataset_id, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT,
&piv_data->peak_no[0][0]);
status = H5Dclose(dataset_id);
@@ -1275,12 +1276,12 @@
return err_msg;
}
file_id = H5Fopen(fname, H5F_ACC_RDONLY, H5P_DEFAULT);
- group_id = H5Gopen (file_id, "POSITIONS");
+ group_id = H5Gopen (file_id, "POSITIONS", H5P_DEFAULT);
/*
* point_x
*/
- dataset_id = H5Dopen(group_id, "point_x");
+ dataset_id = H5Dopen(group_id, "point_x", H5P_DEFAULT);
dataspace_id = H5Dget_space(dataset_id);
rank_x = H5Sget_simple_extent_ndims (dataspace_id);
if (rank_x != 1) {
@@ -1300,7 +1301,7 @@
/*
* point_y
*/
- dataset_id = H5Dopen(group_id, "point_y");
+ dataset_id = H5Dopen(group_id, "point_y", H5P_DEFAULT);
dataspace_id = H5Dget_space(dataset_id);
rank_y = H5Sget_simple_extent_ndims (dataspace_id);
if (rank_y != 1) {
@@ -1367,12 +1368,12 @@
return err_msg;
}
file_id = H5Fcreate(fname, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
- group_id = H5Gcreate (file_id, "POSITIONS", 0);
+ group_id = H5Gcreate (file_id, "POSITIONS", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
H5Gset_comment (group_id, ".", scalar_data->comment);
dims_attrib[0] = 1;
dataspace_id = H5Screate_simple(1, dims_attrib, NULL);
attribute_id = H5Acreate(group_id, "scale", H5T_NATIVE_INT,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
H5Awrite(attribute_id, H5T_NATIVE_INT, &scalar_data->scale);
H5Aclose(attribute_id);
@@ -1385,7 +1386,7 @@
dims_attrib[0] = 1;
dataspace_id = H5Screate_simple(1, dims_attrib, NULL);
attribute_id = H5Acreate(group_id, "dimension", str_MC,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
if (scalar_data->scale) {
H5Awrite(attribute_id, str_MC, "Positions in m");
} else {
@@ -1402,7 +1403,7 @@
dims[0] = scalar_data->nx;
dataspace_id = H5Screate_simple(1, dims, NULL);
dataset_id = H5Dcreate(group_id, "point_x", H5T_NATIVE_FLOAT, dataspace_id,
- H5P_DEFAULT);
+ H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
status = H5Dwrite(dataset_id, H5T_NATIVE_FLOAT, H5S_ALL, H5S_ALL,
H5P_DEFAULT, point_x_hdf);
status = H5Dclose(dataset_id);
@@ -1417,7 +1418,7 @@
dims[0] = scalar_data->ny;
dataspace_id = H5Screate_simple(1, dims, NULL);
dataset_id = H5Dcreate(group_id, "point_y", H5T_NATIVE_FLOAT,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
status = H5Dwrite(dataset_id, H5T_NATIVE_FLOAT, H5S_ALL, H5S_ALL,
H5P_DEFAULT, point_y_hdf);
status = H5Dclose(dataset_id);
@@ -1471,14 +1472,14 @@
return err_msg;
}
file_id = H5Fopen(fname, H5F_ACC_RDONLY, H5P_DEFAULT);
- group_data = H5Gopen (file_id, "SCALARS");
- group_id = H5Gopen (group_data, DATA_KEY);
+ group_data = H5Gopen (file_id, "SCALARS", H5P_DEFAULT);
+ group_id = H5Gopen (group_data, DATA_KEY, H5P_DEFAULT);
H5Gget_comment (group_id, ".", GPIV_MAX_CHARS, RCSID);
scalar_data->comment = g_strdup (RCSID);
/*
* scalar
*/
- dataset_id = H5Dopen(group_id, "scalar");
+ dataset_id = H5Dopen(group_id, "scalar", H5P_DEFAULT);
dataspace_id = H5Dget_space(dataset_id);
status = H5Dread(dataset_id, H5T_NATIVE_FLOAT, H5S_ALL, H5S_ALL,
H5P_DEFAULT, scalar_data->scalar[0]);
@@ -1488,7 +1489,7 @@
/*
* flag
*/
- dataset_id = H5Dopen(group_id, "flag");
+ dataset_id = H5Dopen(group_id, "flag", H5P_DEFAULT);
dataspace_id = H5Dget_space(dataset_id);
status = H5Dread(dataset_id, H5T_NATIVE_INT, H5S_ALL, H5S_ALL,
H5P_DEFAULT, scalar_data->flag[0]);
@@ -1537,8 +1538,8 @@
return err_msg;
}
file_id = H5Fopen(fname, H5F_ACC_RDWR, H5P_DEFAULT);
- group_data = H5Gopen (file_id, "SCALARS");
- group_id = H5Gcreate (group_data, DATA_KEY, 0);
+ group_data = H5Gopen (file_id, "SCALARS", H5P_DEFAULT);
+ group_id = H5Gcreate (file_id, DATA_KEY, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
H5Gset_comment (group_id, ".", scalar_data->comment);
/*
@@ -1554,7 +1555,7 @@
dataspace_id = H5Screate_simple(2, dims, NULL);
dataset_id = H5Dcreate(group_id, "scalar", H5T_NATIVE_FLOAT,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
status = H5Dwrite(dataset_id, H5T_NATIVE_FLOAT, H5S_ALL, H5S_ALL,
H5P_DEFAULT, &scalar_data->scalar[0][0]);
status = H5Dclose(dataset_id);
@@ -1566,7 +1567,7 @@
dataspace_id = H5Screate_simple(2, dims, NULL);
dataset_id = H5Dcreate(group_id, "flag", H5T_NATIVE_INT, dataspace_id,
- H5P_DEFAULT);
+ H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
status = H5Dwrite(dataset_id, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT,
&scalar_data->flag[0][0]);
status = H5Dclose(dataset_id);
diff -urNad '--exclude=CVS' '--exclude=.svn' '--exclude=.git' '--exclude=.arch' '--exclude=.hg' '--exclude=_darcs' '--exclude=.bzr' libgpiv-0.6.1~/lib/piv_par.c libgpiv-0.6.1/lib/piv_par.c
--- libgpiv-0.6.1~/lib/piv_par.c 2012-02-01 10:44:11.000000000 +0100
+++ libgpiv-0.6.1/lib/piv_par.c 2012-02-01 11:05:41.000000000 +0100
@@ -1236,9 +1236,12 @@
}
file_id = H5Fopen(fname, H5F_ACC_RDONLY, H5P_DEFAULT);
- group_id = H5Gopen (file_id, "PIV");
+ group_id = H5Gopen (file_id, "PIV", H5P_DEFAULT);
+
+ H5Aiterate (group_id, H5_INDEX_CRT_ORDER, H5_ITER_NATIVE, 0,
+ (H5A_operator_t)attr_info, piv_par);
+
- H5Aiterate(group_id, NULL, (H5A_operator_t) attr_info, piv_par);
status = H5Gclose (group_id);
status = H5Fclose(file_id);
@@ -1273,7 +1276,7 @@
}
file_id = H5Fopen(fname, H5F_ACC_RDWR, H5P_DEFAULT);
- group_id = H5Gopen (file_id, "PIV");
+ group_id = H5Gopen (file_id, "PIV", H5P_DEFAULT);
@@ -1286,7 +1289,7 @@
if (piv_par->int_geo__set) {
attribute_id = H5Acreate(group_id, PIVPAR_KEY__INT_GEO,
H5T_NATIVE_INT,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite(attribute_id, H5T_NATIVE_INT,
&piv_par->int_geo);
status = H5Aclose(attribute_id);
@@ -1296,7 +1299,7 @@
&& piv_par->col_start__set) {
attribute_id = H5Acreate(group_id, PIVPAR_KEY__COL_START,
H5T_NATIVE_INT,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite(attribute_id, H5T_NATIVE_INT,
&piv_par->col_start);
status = H5Aclose(attribute_id);
@@ -1306,7 +1309,7 @@
&& piv_par->col_end__set) {
attribute_id = H5Acreate(group_id, PIVPAR_KEY__COL_END,
H5T_NATIVE_INT,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite(attribute_id, H5T_NATIVE_INT,
&piv_par->col_end);
status = H5Aclose(attribute_id);
@@ -1316,7 +1319,7 @@
&& piv_par->row_start__set) {
attribute_id = H5Acreate(group_id, PIVPAR_KEY__ROW_START,
H5T_NATIVE_INT,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite(attribute_id, H5T_NATIVE_INT,
&piv_par->row_start);
status = H5Aclose(attribute_id);
@@ -1326,7 +1329,7 @@
&& piv_par->row_end__set) {
attribute_id = H5Acreate(group_id, PIVPAR_KEY__ROW_END,
H5T_NATIVE_INT,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite(attribute_id, H5T_NATIVE_INT,
&piv_par->row_end);
status = H5Aclose(attribute_id);
@@ -1339,7 +1342,7 @@
&& piv_par->int_line_row__set) {
attribute_id = H5Acreate(group_id, PIVPAR_KEY__INT_LINE_ROW,
H5T_NATIVE_INT,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite(attribute_id, H5T_NATIVE_INT,
&piv_par->int_line_row);
status = H5Aclose(attribute_id);
@@ -1349,7 +1352,7 @@
&& piv_par->int_line_row_start__set) {
attribute_id = H5Acreate(group_id, PIVPAR_KEY__INT_LINE_ROW_START,
H5T_NATIVE_INT,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite(attribute_id, H5T_NATIVE_INT, &piv_par->int_line_row_start);
status = H5Aclose(attribute_id);
}
@@ -1357,7 +1360,7 @@
if (piv_par->int_geo == GPIV_LINE_C && piv_par->int_line_row_end__set) {
attribute_id = H5Acreate(group_id, PIVPAR_KEY__INT_LINE_ROW_END,
H5T_NATIVE_INT,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite(attribute_id, H5T_NATIVE_INT,
&piv_par->int_line_row_end);
status = H5Aclose(attribute_id);
@@ -1367,7 +1370,7 @@
&& piv_par->int_line_col__set) {
attribute_id = H5Acreate(group_id, PIVPAR_KEY__INT_LINE_COL,
H5T_NATIVE_INT,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite(attribute_id, H5T_NATIVE_INT,
&piv_par->int_line_col);
status = H5Aclose(attribute_id);
@@ -1377,7 +1380,7 @@
&& piv_par->int_line_col_start__set) {
attribute_id = H5Acreate(group_id, PIVPAR_KEY__INT_LINE_COL_START,
H5T_NATIVE_INT,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite(attribute_id, H5T_NATIVE_INT,
&piv_par->int_line_col_start);
status = H5Aclose(attribute_id);
@@ -1387,7 +1390,7 @@
&& piv_par->int_line_col_end__set) {
attribute_id = H5Acreate(group_id, PIVPAR_KEY__INT_LINE_COL_END,
H5T_NATIVE_INT,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite(attribute_id, H5T_NATIVE_INT,
&piv_par->int_line_col_end);
status = H5Aclose(attribute_id);
@@ -1402,7 +1405,7 @@
&& piv_par->int_point_col__set) {
attribute_id = H5Acreate(group_id, PIVPAR_KEY__INT_POINT_COL,
H5T_NATIVE_INT,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite(attribute_id, H5T_NATIVE_INT,
&piv_par->int_point_col);
status = H5Aclose(attribute_id);
@@ -1411,7 +1414,7 @@
if (piv_par->int_geo == GPIV_POINT && piv_par->int_point_row__set) {
attribute_id = H5Acreate(group_id, PIVPAR_KEY__INT_POINT_ROW,
H5T_NATIVE_INT,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite(attribute_id, H5T_NATIVE_INT,
&piv_par->int_point_row);
status = H5Aclose(attribute_id);
@@ -1423,7 +1426,7 @@
if (piv_par->int_size_f__set) {
attribute_id = H5Acreate(group_id, PIVPAR_KEY__INT_SIZE_F,
H5T_NATIVE_INT,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite(attribute_id, H5T_NATIVE_INT,
&piv_par->int_size_f);
status = H5Aclose(attribute_id);
@@ -1432,7 +1435,7 @@
if (piv_par->int_size_i__set) {
attribute_id = H5Acreate(group_id, PIVPAR_KEY__INT_SIZE_I,
H5T_NATIVE_INT,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite(attribute_id, H5T_NATIVE_INT,
&piv_par->int_size_i);
status = H5Aclose(attribute_id);
@@ -1441,7 +1444,7 @@
if (piv_par->int_shift__set) {
attribute_id = H5Acreate(group_id, PIVPAR_KEY__INT_SHIFT,
H5T_NATIVE_INT,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite(attribute_id, H5T_NATIVE_INT,
&piv_par->int_shift);
status = H5Aclose(attribute_id);
@@ -1450,7 +1453,7 @@
if (piv_par->pre_shift_col__set) {
attribute_id = H5Acreate(group_id, PIVPAR_KEY__PRE_SHIFT_COL,
H5T_NATIVE_INT,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite(attribute_id, H5T_NATIVE_INT,
&piv_par->pre_shift_col);
status = H5Aclose(attribute_id);
@@ -1459,7 +1462,7 @@
if (piv_par->pre_shift_row__set) {
attribute_id = H5Acreate(group_id, PIVPAR_KEY__PRE_SHIFT_ROW,
H5T_NATIVE_INT,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite(attribute_id, H5T_NATIVE_INT,
&piv_par->pre_shift_row);
status = H5Aclose(attribute_id);
@@ -1471,7 +1474,7 @@
if (piv_par->ifit__set) {
attribute_id = H5Acreate(group_id, PIVPAR_KEY__IFIT,
H5T_NATIVE_INT,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite(attribute_id, H5T_NATIVE_INT, &piv_par->ifit);
status = H5Aclose(attribute_id);
}
@@ -1479,7 +1482,7 @@
if (piv_par->peak__set) {
attribute_id = H5Acreate(group_id, PIVPAR_KEY__PEAK,
H5T_NATIVE_INT,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite(attribute_id, H5T_NATIVE_INT, &piv_par->peak);
status = H5Aclose(attribute_id);
}
@@ -1487,7 +1490,7 @@
if (piv_par->int_scheme__set) {
attribute_id = H5Acreate(group_id, PIVPAR_KEY__INT_SCHEME,
H5T_NATIVE_INT,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite(attribute_id, H5T_NATIVE_INT,
&piv_par->int_scheme);
status = H5Aclose(attribute_id);
@@ -1496,7 +1499,7 @@
if (piv_par->spof_filter__set) {
attribute_id = H5Acreate(group_id, PIVPAR_KEY__SPOF_FILTER,
H5T_NATIVE_INT,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite(attribute_id, H5T_NATIVE_INT,
&piv_par->spof_filter);
status = H5Aclose(attribute_id);
@@ -1505,7 +1508,7 @@
if (piv_par->gauss_weight_ia__set) {
attribute_id = H5Acreate(group_id, PIVPAR_KEY__GAUSS_WEIGHT_IA,
H5T_NATIVE_INT,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite(attribute_id, H5T_NATIVE_INT,
&piv_par->gauss_weight_ia);
status = H5Aclose(attribute_id);
@@ -1514,7 +1517,7 @@
if (piv_par->print_piv__set) {
attribute_id = H5Acreate(group_id, "print_piv",
H5T_NATIVE_INT,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite(attribute_id, H5T_NATIVE_INT,
&piv_par->print_piv);
status = H5Aclose(attribute_id);
diff -urNad '--exclude=CVS' '--exclude=.svn' '--exclude=.git' '--exclude=.arch' '--exclude=.hg' '--exclude=_darcs' '--exclude=.bzr' libgpiv-0.6.1~/lib/post_par.c libgpiv-0.6.1/lib/post_par.c
--- libgpiv-0.6.1~/lib/post_par.c 2012-02-01 10:44:11.000000000 +0100
+++ libgpiv-0.6.1/lib/post_par.c 2012-02-01 11:05:41.000000000 +0100
@@ -645,12 +645,18 @@
}
file_id = H5Fopen(fname, H5F_ACC_RDONLY, H5P_DEFAULT);
- group_id = H5Gopen (file_id, "PIV");
- H5Aiterate (group_id, NULL, (H5A_operator_t)attr_info, post_par);
+ group_id = H5Gopen (file_id, "PIV", H5P_DEFAULT);
+ H5Aiterate (group_id, H5_INDEX_CRT_ORDER, H5_ITER_NATIVE, 0,
+ (H5A_operator_t)attr_info, post_par);
+
+
status = H5Gclose (group_id);
- group_id = H5Gopen (file_id, "SCALARS");
- H5Aiterate(group_id, NULL, (H5A_operator_t)attr_info, post_par);
+ group_id = H5Gopen (file_id, "SCALARS", H5P_DEFAULT);
+ H5Aiterate (group_id, H5_INDEX_CRT_ORDER, H5_ITER_NATIVE, 0,
+ (H5A_operator_t)attr_info, post_par);
+
+
status = H5Gclose (group_id);
status = H5Fclose(file_id);
@@ -697,7 +703,7 @@
return err_msg;
}
file_id = H5Fopen(fname, H5F_ACC_RDWR, H5P_DEFAULT);
- group_id = H5Gopen (file_id, "PIV");
+ group_id = H5Gopen (file_id, "PIV", H5P_DEFAULT);
@@ -711,7 +717,7 @@
attribute_id = H5Acreate(group_id,
POSTPAR_KEY__OPERATOR_MANIPIV,
H5T_NATIVE_INT,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite(attribute_id, H5T_NATIVE_INT,
&post_par->operator_manipiv);
status = H5Aclose(attribute_id);
@@ -724,7 +730,7 @@
attribute_id = H5Acreate(group_id,
POSTPAR_KEY__SUBTRACT,
H5T_NATIVE_INT,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite(attribute_id, H5T_NATIVE_INT,
&post_par->subtract);
status = H5Aclose(attribute_id);
@@ -735,7 +741,7 @@
attribute_id = H5Acreate(group_id,
POSTPAR_KEY__Z_OFF_DX,
H5T_NATIVE_FLOAT,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite(attribute_id, H5T_NATIVE_FLOAT,
&post_par->z_off_dx);
status = H5Aclose(attribute_id);
@@ -745,7 +751,7 @@
attribute_id = H5Acreate(group_id,
POSTPAR_KEY__Z_OFF_DY,
H5T_NATIVE_FLOAT,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite(attribute_id, H5T_NATIVE_FLOAT,
&post_par->z_off_dy);
status = H5Aclose(attribute_id);
@@ -756,13 +762,13 @@
/*
* Parameters of vorstra
*/
- group_id = H5Gopen (file_id, "SCALARS");
+ group_id = H5Gopen (file_id, "SCALARS", H5P_DEFAULT);
if (post_par->diff_type__set) {
attribute_id = H5Acreate(group_id,
POSTPAR_KEY__DIFF_TYPE,
H5T_NATIVE_INT,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite(attribute_id, H5T_NATIVE_INT,
&post_par->diff_type);
status = H5Aclose(attribute_id);
@@ -772,7 +778,7 @@
attribute_id = H5Acreate(group_id,
POSTPAR_KEY__OPERATOR_VORSTRA,
H5T_NATIVE_INT,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite(attribute_id, H5T_NATIVE_INT,
&post_par->operator_vorstra);
status = H5Aclose(attribute_id);
@@ -786,7 +792,7 @@
attribute_id = H5Acreate(group_id,
POSTPAR_KEY__SCALE_TYPE,
H5T_NATIVE_INT,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite(attribute_id, H5T_NATIVE_INT,
&post_par->scale_type);
status = H5Aclose(attribute_id);
diff -urNad '--exclude=CVS' '--exclude=.svn' '--exclude=.git' '--exclude=.arch' '--exclude=.hg' '--exclude=_darcs' '--exclude=.bzr' libgpiv-0.6.1~/lib/valid_par.c libgpiv-0.6.1/lib/valid_par.c
--- libgpiv-0.6.1~/lib/valid_par.c 2012-02-01 10:44:11.000000000 +0100
+++ libgpiv-0.6.1/lib/valid_par.c 2012-02-01 11:05:41.000000000 +0100
@@ -539,8 +539,11 @@
}
file_id = H5Fopen(fname, H5F_ACC_RDONLY, H5P_DEFAULT);
- group_id = H5Gopen (file_id, "PIV");
- H5Aiterate(group_id, NULL, (H5A_operator_t)attr_info, valid_par);
+ group_id = H5Gopen (file_id, "PIV", H5P_DEFAULT);
+ H5Aiterate (group_id, H5_INDEX_CRT_ORDER, H5_ITER_NATIVE, 0,
+ (H5A_operator_t)attr_info, valid_par);
+
+
status = H5Gclose (group_id);
status = H5Fclose(file_id);
@@ -587,8 +590,8 @@
return err_msg;
}
file_id = H5Fopen(fname, H5F_ACC_RDWR, H5P_DEFAULT);
-/* group_par = H5Gopen (file_id, "PARAMETERS"); */
- group_id = H5Gopen (file_id, "PIV");
+/* group_par = H5Gopen (file_id, "PARAMETERS", H5P_DEFAULT); */
+ group_id = H5Gopen (file_id, "PIV", H5P_DEFAULT);
@@ -602,7 +605,7 @@
attribute_id = H5Acreate(group_id,
VALIDPAR_KEY__DATA_YIELD,
H5T_NATIVE_FLOAT,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite(attribute_id, H5T_NATIVE_FLOAT,
&valid_par->data_yield);
status = H5Aclose(attribute_id);
@@ -612,7 +615,7 @@
attribute_id = H5Acreate(group_id,
VALIDPAR_KEY__RESIDU_MAX,
H5T_NATIVE_FLOAT,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite(attribute_id, H5T_NATIVE_FLOAT,
&valid_par->residu_max);
status = H5Aclose(attribute_id);
@@ -623,7 +626,7 @@
attribute_id = H5Acreate(group_id,
VALIDPAR_KEY__NEIGHBORS,
H5T_NATIVE_INT,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite(attribute_id, H5T_NATIVE_INT,
&valid_par->neighbors);
status = H5Aclose(attribute_id);
@@ -634,7 +637,7 @@
attribute_id = H5Acreate(group_id,
VALIDPAR_KEY__RESIDU_TYPE,
H5T_NATIVE_INT,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite(attribute_id, H5T_NATIVE_INT,
&valid_par->residu_type);
status = H5Aclose(attribute_id);
@@ -644,7 +647,7 @@
attribute_id = H5Acreate(group_id,
VALIDPAR_KEY__SUBST_TYPE,
H5T_NATIVE_INT,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite(attribute_id, H5T_NATIVE_INT,
&valid_par->subst_type);
status = H5Aclose(attribute_id);
@@ -654,7 +657,7 @@
attribute_id = H5Acreate(group_id,
VALIDPAR_KEY__HISTO_TYPE,
H5T_NATIVE_INT,
- dataspace_id, H5P_DEFAULT);
+ dataspace_id, H5P_DEFAULT, H5P_DEFAULT);
status = H5Awrite(attribute_id, H5T_NATIVE_INT,
&valid_par->histo_type);
status = H5Aclose(attribute_id);
|
