File: hrepack_vs.c

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/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
 * Copyright by The HDF Group.                                               *
 * Copyright by the Board of Trustees of the University of Illinois.         *
 * All rights reserved.                                                      *
 *                                                                           *
 * This file is part of HDF.  The full HDF copyright notice, including       *
 * terms governing use, modification, and redistribution, is contained in    *
 * the COPYING file, which can be found at the root of the source code       *
 * distribution tree, or in https://support.hdfgroup.org/ftp/HDF/releases/.  *
 * If you do not have access to either file, you may request a copy from     *
 * help@hdfgroup.org.                                                        *
 * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */

#include <assert.h>
#include <stdlib.h>

#include "hdf.h"
#include "mfhdf.h"

#include "hrepack_vs.h"
#include "hrepack_utils.h"
#include "hrepack_an.h"

/*-------------------------------------------------------------------------
 * Function: copy_vs
 *
 * Purpose: copy a VS from input file to output file
 *
 * Return: 0, -1 for error
 *
 * Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
 *
 * Date: July 11, 2003
 *
 *-------------------------------------------------------------------------
 */

int
copy_vs(int32 infile_id, int32 outfile_id, int32 tag, /* tag of input VS */
        int32      ref,                               /* ref of input VS */
        int32      vgroup_id_out_par,                 /* output parent group ID */
        char      *path_name,                         /* absolute path for input group name */
        options_t *options, list_table_t *list_tbl, int is_lone)
{
    int32 vdata_id  = FAIL; /* vdata identifier */
    int32 vdata_out = FAIL; /* vdata identifier */
    int32 vdata_ref,        /* reference number of the vdata */
        n_records,          /* number of records */
        vdata_size, interlace_mode, field_type, field_order;
    int    n_fields, n_attrs;
    char  *vdata_name     = NULL;
    char  *vdata_class    = NULL;
    char  *fieldname_list = NULL;
    char  *path           = NULL;
    char  *field_name;
    uint8 *buf = NULL;
    int    ret = 0;

    if (NULL == (vdata_name = calloc(1, VSNAMELENMAX))) {
        ret = -1;
        goto out;
    }
    if (NULL == (vdata_class = calloc(1, VSNAMELENMAX))) {
        ret = -1;
        goto out;
    }
    if (NULL == (fieldname_list = calloc(1, VSFIELDMAX * FIELDNAMELENMAX))) {
        ret = -1;
        goto out;
    }

    /*-------------------------------------------------------------------------
     * attach the vdata, gets its name and class
     *-------------------------------------------------------------------------
     */

    if ((vdata_id = VSattach(infile_id, ref, "r")) == FAIL) {
        printf("Failed to attach vdata ref %d\n", ref);
        ret = -1;
        goto out;
    }
    if (VSgetname(vdata_id, vdata_name) == FAIL) {
        printf("Failed to name for vdata ref %d\n", ref);
        ret = -1;
        goto out;
    }
    if (VSgetclass(vdata_id, vdata_class) == FAIL) {
        printf("Failed to name for vdata ref %d\n", ref);
        ret = -1;
        goto out;
    }

    /* ignore reserved HDF groups/vdatas; they are lone ones */
    if (is_lone == 1 && vdata_class[0] == '\0') {
        if (is_reserved(vdata_class)) {
            if (VSdetach(vdata_id) == FAIL)
                printf("Failed to detach vdata <%s>\n", path_name);
            ret = 0;
            goto out;
        }
    }

    /* initialize path */
    path = get_path(path_name, vdata_name);

    /* add object to table */
    list_table_add(list_tbl, tag, ref, path);

    if (options->verbose) {
        printf(PFORMAT, "", "", "", path);
    }

    /* check inspection mode */
    if (options->trip == 0) {
        if (VSdetach(vdata_id) == FAIL) {
            printf("Failed to detach vdata <%s>\n", path_name);
            ret = -1;
            goto out;
        }
        vdata_id = FAIL;
        ret      = 0;
        goto out;
    }

    /*-------------------------------------------------------------------------
     * get vdata info
     *-------------------------------------------------------------------------
     */

    if (VSinquire(vdata_id, &n_records, &interlace_mode, fieldname_list, &vdata_size, vdata_name) == FAIL) {
        printf("Failed to get info for vdata ref %d\n", ref);
        ret = -1;
        goto out;
    }

    /*-------------------------------------------------------------------------
     * create the VS in the output file.  the vdata reference number is set
     * to -1 for creating and the access mode is "w" for writing
     *-------------------------------------------------------------------------
     */

    if ((vdata_out = VSattach(outfile_id, -1, "w")) == FAIL) {
        printf("Failed to create new VS <%s>\n", path);
        VSdetach(vdata_id);
        ret = -1;
        goto out;
    }
    if (VSsetname(vdata_out, vdata_name) == FAIL) {
        printf("Failed to set name for new VS <%s>\n", path);
        ret = -1;
        goto out;
    }
    if (VSsetclass(vdata_out, vdata_class) == FAIL) {
        printf("Failed to set class for new VS <%s>\n", path);
        ret = -1;
        goto out;
    }
    if (VSsetinterlace(vdata_out, interlace_mode) == FAIL) {
        printf("Failed to set interlace mode for output vdata\n");
        ret = -1;
        goto out;
    }

    /*-------------------------------------------------------------------------
     * define the fields for vdata_out
     *-------------------------------------------------------------------------
     */

    if ((n_fields = VFnfields(vdata_id)) == FAIL) {
        printf("Failed getting fields for VS <%s>\n", path);
        ret = -1;
        goto out;
    }

    for (int i = 0; i < n_fields; i++) {
        field_name  = VFfieldname(vdata_id, i);
        field_type  = VFfieldtype(vdata_id, i);
        field_order = VFfieldorder(vdata_id, i);
        if (VSfdefine(vdata_out, field_name, field_type, field_order) == FAIL) {
            printf("Error: cannot define fields for VS <%s>\n", path);
            ret = -1;
            goto out;
        }
    }

    /* Set fields */
    if (VSsetfields(vdata_out, fieldname_list) == FAIL) {
        printf("Error: cannot define fields for VS <%s>\n", path);
        ret = -1;
        goto out;
    }

    /*-------------------------------------------------------------------------
     * read, write vdata
     *-------------------------------------------------------------------------
     */

    /* Set fields for reading */
    if (VSsetfields(vdata_id, fieldname_list) == FAIL) {
        printf("Error: cannot define fields for VS <%s>\n", path);
        ret = -1;
        goto out;
    }
    if (n_records > 0) {
        if ((buf = (uint8 *)malloc((size_t)(n_records * vdata_size))) == NULL) {
            printf("Failed to get memory for new VS <%s>\n", path);
            ret = -1;
            goto out;
        }
        if (VSread(vdata_id, buf, n_records, interlace_mode) == FAIL) {
            printf("Error reading vdata <%s>\n", path);
            ret = -1;
            goto out;
        }
        if (VSwrite(vdata_out, buf, n_records, interlace_mode) == FAIL) {
            printf("Error writing vdata <%s>\n", path);
            ret = -1;
            goto out;
        }
    }

    /*-------------------------------------------------------------------------
     * read, write attributes
     *-------------------------------------------------------------------------
     */

    if ((n_attrs = VSfnattrs(vdata_id, -1)) == FAIL) {
        printf("Failed getting attributes for VS <%s>\n", path);
        ret = -1;
        goto out;
    }
    for (int i = 0; i < n_attrs; i++) {
        copy_vdata_attribute(vdata_id, vdata_out, -1, i);
    }

    /*-------------------------------------------------------------------------
     * read, write field attributes
     *-------------------------------------------------------------------------
     */

    for (int i = 0; i < n_fields; i++) {
        if ((n_attrs = VSfnattrs(vdata_id, i)) == FAIL) {
            printf("Failed getting fields for VS <%s>\n", path);
            ret = -1;
            goto out;
        }
        for (int j = 0; j < n_attrs; j++) {
            copy_vdata_attribute(vdata_id, vdata_out, i, j);
        }
    }

    /*-------------------------------------------------------------------------
     * add VS to group, if needed
     *-------------------------------------------------------------------------
     */
    if (vgroup_id_out_par) {
        /* obtain the reference number of the new VS  */
        if ((vdata_ref = VSQueryref(vdata_out)) == 0) {
            printf("Failed to get new VS reference in <%s>\n", path);
        }

        /* add the VS to the vgroup. the INPUT TAG is used */
        if (Vaddtagref(vgroup_id_out_par, tag, vdata_ref) == FAIL) {
            printf("Failed to add new VS to group <%s>\n", path);
        }
    }

    /*-------------------------------------------------------------------------
     * copy ANs
     *-------------------------------------------------------------------------
     */

    if (copy_vs_an(infile_id, outfile_id, vdata_id, vdata_out, path, options) < 0) {
        ret = -1;
        goto out;
    }

out:
    /* terminate access to the VSs */
    if (FAIL != vdata_id && VSdetach(vdata_id)) {
        printf("Could not detach VG in <%s>\n", path);
        ret = -1;
    }
    if (FAIL != vdata_out && VSdetach(vdata_out) == FAIL) {
        printf("Could not detach VG in <%s>\n", path);
        ret = -1;
    }

    free(vdata_name);
    free(vdata_class);
    free(fieldname_list);
    free(path);
    free(buf);

    return ret;
}

/*-------------------------------------------------------------------------
 * Function: copy_vdata_attribute
 *
 * Purpose: copy VS attributes from input file to output file
 *
 * Return: 1, for success, -1 for error
 *
 * Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
 *
 * Date: July 28, 2003
 *
 *-------------------------------------------------------------------------
 */

int
copy_vdata_attribute(int32 in, int32 out, int32 findex, intn attrindex)
{
    char   attr_name[H4_MAX_NC_NAME];
    int32  n_values, attr_size, attr_type;
    void **values = NULL;

    /* Get attribute information */
    VSattrinfo(in, findex, attrindex, attr_name, &attr_type, &n_values, &attr_size);

    /* Allocate space for attribute values */
    if ((values = (void *)malloc((size_t)(attr_size * n_values))) == NULL) {
        printf("Cannot allocate %d values of size %d for attribute %s", n_values, attr_size, attr_name);
        return -1;
    }

    /* Read attribute from input object */
    if (VSgetattr(in, findex, attrindex, values) == FAIL) {
        printf("Cannot read attribute %s\n", attr_name);
        free(values);
        return -1;
    }

    /* Write attribute to output object */
    if (VSsetattr(out, findex, attr_name, attr_type, n_values, values) == FAIL) {
        printf("Cannot write attribute %s\n", attr_name);
        free(values);
        return -1;
    }

    free(values);

    return 1;
}