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/*********************************************************************
* Copyright 1993, UCAR/Unidata
* See netcdf/COPYRIGHT file for copying and redistribution conditions.
*********************************************************************/
#include <stdio.h>
#include <ctype.h>
#include <stdlib.h>
#include <string.h>
#include "hdf.h"
#ifdef H4_HAVE_NETCDF
#include <netcdf.h>
#else
#include <hdf4_netcdf.h>
#endif
#include "ncdump.h"
#include "dumplib.h"
#include "vardata.h"
/*
* Function from ncdump.c. "Fixes" variable names to remove spaces and other
* "illegal" characters.
*/
extern char *sanitize_string(char *str, bool fix_str);
static void annotate(struct ncvar *vp, struct fspec *fsp, long cor[], long iel);
#define VD_STREQ(a, b) (*(a) == *(b) && strcmp((a), (b)) == 0)
/*
* Print a row of variable values. Makes sure output lines aren't too long
* by judiciously inserting newlines.
*/
/* vp - variable */
/* len - number of values to print */
/* fmt
* printf format used for each value. If
* nc_type is NC_CHAR and this is NULL,
* character arrays will be printed as strings
* enclosed in quotes.
*/
/* more
* true if more data will follow, so add
* trailing comma
*/
/* lastrow
* true if this is the last row for this
* variable, so terminate with ";" instead of
* ","
*/
/* vals pointer to block of values */
static void
pr_vals(struct ncvar *vp, long len, char *fmt, bool more, bool lastrow, void *vals)
{
long iel;
union {
char *cp;
short *sp;
nclong *lp;
float *fp;
double *dp;
} gp;
char *sp;
unsigned char uc;
float fill_float;
double fill_double;
char sout[100]; /* temporary string for each encoded output */
fill_float = FILL_FLOAT; /* static initialization hits ultrix cc bug */
fill_double = FILL_DOUBLE;
switch (vp->type) {
case NC_BYTE:
gp.cp = (char *)vals;
for (iel = 0; iel < len - 1; iel++) {
(void)sprintf(sout, fmt, *gp.cp++);
(void)strcat(sout, ", ");
lput(sout);
}
(void)sprintf(sout, fmt, *gp.cp++);
lput(sout);
break;
case NC_CHAR:
gp.cp = (char *)vals;
if (fmt == 0 || VD_STREQ(fmt, "%s") || VD_STREQ(fmt, "")) { /* as string */
printf("\"");
/* adjust len so trailing nulls don't get printed */
sp = gp.cp + len;
while (len > 0 && *--sp == '\0')
len--;
for (iel = 0; iel < len; iel++)
switch (uc = *gp.cp++ & 0377) {
case '\b':
printf("\\b");
break;
case '\f':
printf("\\f");
break;
case '\n': /* generate linebreaks after new-lines */
printf("\\n\",\n \"");
break;
case '\r':
printf("\\r");
break;
case '\t':
printf("\\t");
break;
case '\v':
printf("\\v");
break;
case '\\':
printf("\\\\");
break;
case '\'':
printf("\\\'");
break;
case '\"':
printf("\\\"");
break;
default:
if (isprint(uc))
printf("%c", uc);
else
printf("\\%.3o", uc);
break;
}
printf("\"");
}
else { /* use format from C_format attribute */
for (iel = 0; iel < len - 1; iel++) {
(void)sprintf(sout, fmt, *gp.cp++);
(void)strcat(sout, ", ");
lput(sout);
}
(void)sprintf(sout, fmt, *gp.cp++);
lput(sout);
}
break;
case NC_SHORT:
gp.sp = (short *)vals;
for (iel = 0; iel < len - 1; iel++) {
(void)sprintf(sout, fmt, *gp.sp++);
(void)strcat(sout, ", ");
lput(sout);
}
(void)sprintf(sout, fmt, *gp.sp++);
lput(sout);
break;
case NC_LONG:
gp.lp = (nclong *)vals;
for (iel = 0; iel < len - 1; iel++) {
(void)sprintf(sout, fmt, *gp.lp++);
(void)strcat(sout, ", ");
lput(sout);
}
(void)sprintf(sout, fmt, *gp.lp++);
lput(sout);
break;
case NC_FLOAT:
gp.fp = (float *)vals;
for (iel = 0; iel < len - 1; iel++) {
if (*gp.fp >= fill_float)
(void)sprintf(sout, "FloatInf, ");
else {
(void)sprintf(sout, fmt, (double)*gp.fp);
(void)strcat(sout, ", ");
}
lput(sout);
gp.fp++;
}
if (*gp.fp >= fill_float)
(void)sprintf(sout, "FloatInf");
else
(void)sprintf(sout, fmt, (double)*gp.fp);
lput(sout);
gp.fp++;
break;
case NC_DOUBLE:
gp.dp = (double *)vals;
for (iel = 0; iel < len - 1; iel++) {
if (*gp.dp >= fill_double)
(void)sprintf(sout, "DoubleInf, ");
else {
(void)sprintf(sout, fmt, *gp.dp);
(void)strcat(sout, ", ");
}
lput(sout);
gp.dp++;
}
if (*gp.dp >= fill_double)
(void)sprintf(sout, "DoubleInf");
else
(void)sprintf(sout, fmt, *gp.dp);
lput(sout);
gp.dp++;
break;
default:
error("pr_vals: bad type");
}
if (more) {
lput(", ");
}
else {
if (lastrow) {
lput(" ;");
lput("\n");
}
else {
lput(",\n");
lput(" ");
}
}
}
/*
* print last delimiter in each line before annotation (, or ;)
*/
static void
lastdelim(bool more, bool lastrow)
{
if (more) {
printf(", ");
}
else {
if (lastrow) {
printf(";");
}
else {
printf(",");
}
}
}
/*
* Annotates a value in data section with var name and indices in comment
*/
/* vp - variable */
/* fsp - formatting specs */
/* cor - corner coordinates */
/* iel - which element in current row */
static void
annotate(struct ncvar *vp, struct fspec *fsp, long cor[], long iel)
{
int vrank = vp->ndims;
int id;
/* print indices according to data_lang */
printf(" // %s(", vp->name);
switch (fsp->data_lang) {
case LANG_C:
/* C variable indices */
for (id = 0; id < vrank - 1; id++)
printf("%d,", (int)cor[id]);
printf("%d", (int)(cor[id] + iel));
break;
case LANG_F:
/* Fortran variable indices */
printf("%d", (int)(cor[vrank - 1] + iel + 1));
for (id = vrank - 2; id >= 0; id--) {
printf(",%d", (int)(1 + cor[id]));
}
break;
case LANG_NONE:
default:
/* Might want to make this an error */
break;
}
printf(")\n ");
}
/*
* Print a number of commented variable values, where the comments for each
* value identify the variable, and each dimension index.
*/
/* vp - variable */
/* len - number of values to print */
/* fmt
* printf format used for each value. If
* nc_type is NC_CHAR and this is NULL,
* character arrays will be printed as strings
* enclosed in quotes.
*/
/* more
* true if more data for this row will follow,
* so add trailing comma
*/
/* lastrow
* true if this is the last row for this
* variable, so terminate with ";" instead of
* ","
*/
/* vals - pointer to block of values */
/* fsp - formatting specs */
/* cor - corner coordinates */
static void
pr_cvals(struct ncvar *vp, long len, char *fmt, bool more, bool lastrow, void *vals, struct fspec *fsp,
long cor[])
{
long iel;
union {
char *cp;
short *sp;
nclong *lp;
float *fp;
double *dp;
} gp;
char *sp;
unsigned char uc;
float fill_float;
double fill_double;
fill_float = FILL_FLOAT; /* static initialization hits ultrix cc bug */
fill_double = FILL_DOUBLE;
switch (vp->type) {
case NC_BYTE:
gp.cp = (char *)vals;
for (iel = 0; iel < len - 1; iel++) {
printf(fmt, *gp.cp++);
printf(", ");
annotate(vp, fsp, cor, iel);
}
printf(fmt, *gp.cp++);
lastdelim(more, lastrow);
annotate(vp, fsp, cor, iel);
break;
case NC_CHAR:
gp.cp = (char *)vals;
if (fmt == 0 || VD_STREQ(fmt, "%s") || VD_STREQ(fmt, "")) { /* as string */
printf("\"");
/* adjust len so trailing nulls don't get printed */
sp = gp.cp + len;
while (len > 0 && *--sp == '\0')
len--;
for (iel = 0; iel < len; iel++)
switch (uc = *gp.cp++ & 0377) {
case '\b':
printf("\\b");
break;
case '\f':
printf("\\f");
break;
case '\n': /* generate linebreaks after new-lines */
printf("\\n\",\n \"");
break;
case '\r':
printf("\\r");
break;
case '\t':
printf("\\t");
break;
case '\v':
printf("\\v");
break;
case '\\':
printf("\\\\");
break;
case '\'':
printf("\\\'");
break;
case '\"':
printf("\\\"");
break;
default:
if (isprint(uc))
printf("%c", uc);
else
printf("\\%.3o", uc);
break;
}
printf("\"");
annotate(vp, fsp, cor, 0);
}
else { /* use format from C_format attribute */
for (iel = 0; iel < len - 1; iel++) {
printf(fmt, *gp.cp++);
printf(", ");
annotate(vp, fsp, cor, iel);
}
printf(fmt, *gp.cp++);
lastdelim(more, lastrow);
annotate(vp, fsp, cor, iel);
}
break;
case NC_SHORT:
gp.sp = (short *)vals;
for (iel = 0; iel < len - 1; iel++) {
printf(fmt, *gp.sp++);
printf(", ");
annotate(vp, fsp, cor, iel);
}
printf(fmt, *gp.sp++);
lastdelim(more, lastrow);
annotate(vp, fsp, cor, iel);
break;
case NC_LONG:
gp.lp = (nclong *)vals;
for (iel = 0; iel < len - 1; iel++) {
printf(fmt, *gp.lp++);
printf(", ");
annotate(vp, fsp, cor, iel);
}
printf(fmt, *gp.lp++);
lastdelim(more, lastrow);
annotate(vp, fsp, cor, iel);
break;
case NC_FLOAT:
gp.fp = (float *)vals;
for (iel = 0; iel < len - 1; iel++) {
if (*gp.fp >= fill_float)
printf("FloatInf");
else
printf(fmt, (double)*gp.fp);
printf(",");
annotate(vp, fsp, cor, iel);
gp.fp++;
}
if (*gp.fp >= fill_float)
printf("FloatInf");
else
printf(fmt, (double)*gp.fp);
lastdelim(more, lastrow);
annotate(vp, fsp, cor, iel);
gp.fp++;
break;
case NC_DOUBLE:
gp.dp = (double *)vals;
for (iel = 0; iel < len - 1; iel++) {
if (*gp.dp >= fill_double)
printf("DoubleInf");
else {
printf(fmt, *gp.dp);
}
printf(",");
annotate(vp, fsp, cor, iel);
gp.dp++;
}
if (*gp.dp >= fill_double)
printf("DoubleInf");
else
printf(fmt, *gp.dp);
lastdelim(more, lastrow);
annotate(vp, fsp, cor, iel);
gp.dp++;
break;
default:
error("pr_vals: bad type");
}
}
/*
* Updates a vector of ints, odometer style. Returns 0 if odometer
* overflowed, else 1.
*/
/* dims - The "odometer" limits for each dimension */
/* ndims - Number of dimensions */
/* odom - The "odometer" vector to be updated */
/* add - A vector to "add" to odom on each update */
static int
upcorner(long *dims, int ndims, long *odom, long *add)
{
int id;
int ret = 1;
for (id = ndims - 1; id > 0; id--) {
odom[id] += add[id];
if (odom[id] >= dims[id]) {
odom[id - 1]++;
odom[id] -= dims[id];
}
}
odom[0] += add[0];
if (odom[0] >= dims[0])
ret = 0;
return ret;
}
/* vp - variable */
/* vdims - variable dimension sizes */
/* ncid - netcdf id */
/* varid - variable id */
/* fsp - formatting specs */
int
vardata(struct ncvar *vp, long vdims[], int ncid, int varid, struct fspec *fsp)
{
long cor[H4_MAX_VAR_DIMS]; /* corner coordinates */
long edg[H4_MAX_VAR_DIMS]; /* edges of hypercube */
long add[H4_MAX_VAR_DIMS]; /* "odometer" increment to next "row" */
#define VALBUFSIZ 8192
double vals[VALBUFSIZ / sizeof(double)]; /* aligned buffer */
int gulp = VALBUFSIZ / nctypelen(vp->type);
int id;
int ir;
long nels;
long ncols;
long nrows;
int vrank = vp->ndims;
char *fixed_var;
int ret = 0, err_code = 0;
/* printf format used to print each value */
const char *fmt = get_fmt(ncid, varid, vp->type);
nels = 1;
for (id = 0; id < vrank; id++) {
cor[id] = 0;
edg[id] = 1;
nels *= vdims[id]; /* total number of values for variable */
}
fixed_var = sanitize_string(vp->name, fsp->fix_str);
if (vrank <= 1) {
printf("\n %s = ", fixed_var);
set_indent(strlen(fixed_var) + 4);
}
else {
printf("\n %s =\n ", fixed_var);
set_indent(2);
}
if (vrank < 1) {
ncols = 1;
}
else {
ncols = vdims[vrank - 1]; /* size of "row" along last dimension */
edg[vrank - 1] = vdims[vrank - 1];
for (id = 0; id < vrank; id++)
add[id] = 0;
if (vrank > 1)
add[vrank - 2] = 1;
}
nrows = nels / ncols; /* number of "rows" */
for (ir = 0; ir < nrows; ir++) {
/*
* rather than just printing a whole row at once (which might exceed
* the capacity of MSDOS platforms, for example), we break each row
* into smaller chunks, if necessary.
*/
long corsav = 0;
long left = ncols;
bool lastrow;
if (vrank > 0) {
corsav = cor[vrank - 1];
if (fsp->brief_data_cmnts != false && vrank > 1 &&
left > 0) { /* print brief comment with indices range */
printf("// %s(", fixed_var);
switch (fsp->data_lang) {
case LANG_C:
/* print brief comment with C variable indices */
for (id = 0; id < vrank - 1; id++)
printf("%d,", (int)cor[id]);
if (vdims[vrank - 1] == 1)
printf("0");
else
printf(" 0-%d", (int)vdims[vrank - 1] - 1);
break;
case LANG_F:
/* print brief comment with Fortran variable indices */
if (vdims[vrank - 1] == 1)
printf("1");
else
printf("1-%d ", (int)vdims[vrank - 1]);
for (id = vrank - 2; id >= 0; id--) {
printf(",%d", (int)(1 + cor[id]));
}
break;
case LANG_NONE:
default:
/* Might want to make this an error */
break;
}
printf(")\n ");
set_indent(4);
}
}
lastrow = (ir == nrows - 1) ? true : false;
while (left > 0) {
long toget = left < gulp ? left : gulp;
if (vrank > 0)
edg[vrank - 1] = toget;
/* ncvarget was casted to (void), thus ncdump misinformed users
that the reading succeeded even though the data was corrupted and
reading in fact failed (HDFFR-1468.) Now when ncvarget fails,
break out of the while loop and set error code to indicate this
failure. -BMR, 2015/01/19 */
ret = ncvarget(ncid, varid, cor, edg, (void *)vals);
if (ret == -1) {
err_code = ERR_READFAIL; /* to be returned to caller to
indicate that ncvarget fails */
break;
}
if (fsp->full_data_cmnts)
pr_cvals(vp, toget, fmt, left > toget, lastrow, (void *)vals, fsp, cor);
else
pr_vals(vp, toget, fmt, left > toget, lastrow, (void *)vals);
left -= toget;
if (vrank > 0)
cor[vrank - 1] += toget;
}
/* No failure occurs */
if (ret >= 0) {
if (vrank > 0)
cor[vrank - 1] = corsav;
if (ir < nrows - 1)
if (!upcorner(vdims, vp->ndims, cor, add))
error("vardata: odometer overflowed!");
set_indent(2);
}
}
free(fixed_var);
return (err_code);
/* Previously, it was "return 0;" If this function is revised, this
return statement may be changed appropriately. (HDFFR-1468) */
}
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