File: misc_stat.cpp

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/*!
 * \file
 * \brief Miscellaneous statistics functions and classes - source file
 * \author Tony Ottosson, Johan Bergman and Adam Piatyszek
 *
 * -------------------------------------------------------------------------
 *
 * IT++ - C++ library of mathematical, signal processing, speech processing,
 *        and communications classes and functions
 *
 * Copyright (C) 1995-2008  (see AUTHORS file for a list of contributors)
 *
 * This program is free software; you can redistribute it and/or modify
 * it under the terms of the GNU General Public License as published by
 * the Free Software Foundation; either version 2 of the License, or
 * (at your option) any later version.
 *
 * This program is distributed in the hope that it will be useful,
 * but WITHOUT ANY WARRANTY; without even the implied warranty of
 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 * GNU General Public License for more details.
 *
 * You should have received a copy of the GNU General Public License
 * along with this program; if not, write to the Free Software
 * Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
 *
 * -------------------------------------------------------------------------
 */

#include <itpp/base/algebra/svd.h>
#include <itpp/stat/misc_stat.h>


namespace itpp {

  double mean(const vec &v)
  {
    return sum(v)/v.length();
  }

  std::complex<double> mean(const cvec &v)
  {
    return sum(v)/double(v.size());
  }

  double mean(const svec &v)
  {
    return (double)sum(v)/v.length();
  }

  double mean(const ivec &v)
  {
    return (double)sum(v)/v.length();
  }

  double mean(const mat &m)
  {
    return sum(sum(m))/(m.rows()*m.cols());
  }

  std::complex<double> mean(const cmat &m)
  {
    return sum(sum(m))/static_cast<std::complex<double> >(m.rows()*m.cols());
  }

  double mean(const smat &m)
  {
    return static_cast<double>(sum(sum(m)))/(m.rows()*m.cols());
  }

  double mean(const imat &m)
  {
    return static_cast<double>(sum(sum(m)))/(m.rows()*m.cols());
  }


  double norm(const cvec &v)
  {
    double E = 0.0;
    for (int i = 0; i < v.length(); i++)
      E += std::norm(v[i]);

    return std::sqrt(E);
  }

  double norm(const cvec &v, int p)
  {
    double E = 0.0;
    for (int i = 0; i < v.size(); i++)
      E += std::pow(std::norm(v[i]), p / 2.0); // Yes, 2.0 is correct!

    return std::pow(E, 1.0 / p);
  }

  double norm(const cvec &v, const std::string &s) {
    return norm(v, 2);
  }

  /*
   * Calculate the p-norm of a real matrix
   * p = 1: max(svd(m))
   * p = 2: max(sum(abs(X)))
   */
  double norm(const mat &m, int p)
  {
    it_assert((p == 1) || (p == 2),
	      "norm(): Can only calculate a matrix norm of order 1 or 2");

    if (p == 1)
      return max(sum(abs(m)));
    else
      return max(svd(m));
  }

  /*
   * Calculate the p-norm of a complex matrix
   * p = 1: max(svd(m))
   * p = 2: max(sum(abs(X)))
   */
  double norm(const cmat &m, int p)
  {
    it_assert((p == 1) || (p == 2),
	      "norm(): Can only calculate a matrix norm of order 1 or 2");

    if (p == 1)
      return max(sum(abs(m)));
    else
      return max(svd(m));
  }

  // Calculate the frobeniuos norm of a matrix for s = "fro"
  double norm(const mat &m, const std::string &s)
  {
    it_assert(s == "fro", "norm(): Unrecognised norm");
    return std::sqrt(sum(diag(transpose(m) * m)));
  }

  // Calculate the frobeniuos norm of a matrix for s = "fro"
  double norm(const cmat &m, const std::string &s)
  {
    it_assert(s == "fro", "norm(): Unrecognised norm");
    return std::sqrt(sum(real(diag(hermitian_transpose(m) * m))));
  }


  double variance(const cvec &v)
  {
    int len = v.size();
    double sq_sum=0.0;
    std::complex<double> sum=0.0;
    const std::complex<double> *p=v._data();

    for (int i=0; i<len; i++, p++) {
      sum += *p;
      sq_sum += std::norm(*p);
    }

    return (double)(sq_sum - std::norm(sum)/len) / (len-1);
  }

  double moment(const vec &x, const int r)
  {
    double m = mean(x), mr=0;
    int n = x.size();
    double temp;

      switch (r) {
      case 1:
	for (int j=0; j<n; j++)
	  mr += (x(j)-m);
	break;
      case 2:
	for (int j=0; j<n; j++)
	  mr += (x(j)-m) * (x(j)-m);
	break;
      case 3:
	for (int j=0; j<n; j++)
	  mr += (x(j)-m) * (x(j)-m) * (x(j)-m);
	break;
      case 4:
	for (int j=0; j<n; j++) {
	  temp = (x(j)-m) * (x(j)-m);
	  temp *= temp;
	  mr += temp;
	}
	break;
      default:
	for (int j=0; j<n; j++)
	  mr += std::pow(x(j)-m, double(r));
	break;
      }

    return mr/n;
  }


  double skewness(const vec &x)
  {
    int n = x.size();

    double k2 = variance(x)*n/(n-1); // 2nd k-statistic
    double k3 = moment(x, 3)*n*n/(n-1)/(n-2); //3rd k-statistic

    return k3/std::pow(k2, 3.0/2.0);
  }

  double kurtosisexcess(const vec &x)
  {
    int n = x.size();
    double m2 = variance(x);
    double m4 = moment(x, 4);

    double k2 = m2*n/(n-1); // 2nd k-statistic
    double k4 = (m4*(n+1) - 3*(n-1)*m2*m2)*n*n/(n-1)/(n-2)/(n-3); //4th k-statistic

    return k4/(k2*k2);
  }

} // namespace itpp