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/* Copyright (c) 2009 Peter Troshin
*
* JAva Bioinformatics Analysis Web Services (JABAWS) @version: 1.0
*
* This library is free software; you can redistribute it and/or modify it under the terms of the
* Apache License version 2 as published by the Apache Software Foundation
*
* This library is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without
* even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the Apache
* License for more details.
*
* A copy of the license is in apache_license.txt. It is also available here:
* @see: http://www.apache.org/licenses/LICENSE-2.0.txt
*
* Any republication or derived work distributed in source code form
* must include this copyright and license notice.
*/
package compbio.engine.client;
import java.util.List;
import compbio.metadata.Limit;
import compbio.metadata.LimitsManager;
import compbio.metadata.ResultNotAvailableException;
/**
* Interface to a native executable.
*
* @author pvtroshin
*
* @param <T>
*/
public interface Executable<T> {
enum ExecProvider {
Local, Cluster, Any
};
/**
* Adds parameter to the list of parameters for a native executable
*
* @param parameters
* @return this Executable
*/
Executable<T> addParameters(List<String> parameters);
// TODO remove absolute
@Deprecated
List<String> getCreatedFiles();
String getInput();
String getOutput();
String getError();
CommandBuilder<T> getParameters(ExecProvider provider);
<V> V getResults(String directory) throws ResultNotAvailableException;
Executable<?> loadRunConfiguration(RunConfiguration rconfig);
Limit<T> getLimit(String presetName);
LimitsManager<T> getLimits();
String getClusterJobSettings();
}
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