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/* Copyright (c) 2009 Peter Troshin
*
* JAva Bioinformatics Analysis Web Services (JABAWS) @version: 1.0
*
* This library is free software; you can redistribute it and/or modify it under the terms of the
* Apache License version 2 as published by the Apache Software Foundation
*
* This library is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without
* even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the Apache
* License for more details.
*
* A copy of the license is in apache_license.txt. It is also available here:
* @see: http://www.apache.org/licenses/LICENSE-2.0.txt
*
* Any republication or derived work distributed in source code form
* must include this copyright and license notice.
*/
package compbio.metadata;
import java.util.List;
import javax.xml.bind.annotation.XmlAccessType;
import javax.xml.bind.annotation.XmlAccessorType;
import compbio.data.sequence.FastaSequence;
/**
* This exception is thrown if the task larger in size that the limit that
* applies to the calculation.
*
* @see Limit
*
* @author pvtroshin
*
* @version 1.0 February 2010
*/
@XmlAccessorType(XmlAccessType.FIELD)
public class LimitExceededException extends JobSubmissionException {
private static final long serialVersionUID = 15066952180013505L;
int numberOfSequencesAllowed;
int actualNumberofSequences;
int aSequenceLenghtAllowed;
int aSequenceLenghtActual;
public LimitExceededException(String message) {
super(message);
}
public static LimitExceededException newLimitExceeded(Limit<?> limit,
List<FastaSequence> seqs) {
String message = "Job exceed size limits, maximum number of sequences must be less than "
+ limit.getSeqNumber() + "\n";
if (limit.getAvgSeqLength() != 0) {
message += "and an average sequence length must not exceed "
+ limit.getAvgSeqLength() + "\n";
}
message += " However, the task contained " + seqs.size()
+ " sequences " + "\n";
if (limit.getAvgSeqLength() != 0) {
message += "and an average sequence length was "
+ Limit.getAvgSequenceLength(seqs) + "\n";
}
return new LimitExceededException(message);
}
public int getNumberOfSequencesAllowed() {
return numberOfSequencesAllowed;
}
public int getActualNumberofSequences() {
return actualNumberofSequences;
}
public int getSequenceLenghtAllowed() {
return aSequenceLenghtAllowed;
}
public int getSequenceLenghtActual() {
return aSequenceLenghtActual;
}
}
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