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# Specify the minimum version for CMake
cmake_minimum_required(VERSION 3.1)
# Project's name
project(mmmulti)
# We build using c++14
set(CMAKE_CXX_STANDARD 14)
set(THREADS_PREFER_PTHREAD_FLAG ON)
find_package(Threads REQUIRED)
# Use all standard-compliant optimizations
set (CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -O3 -g -fPIC -fopenmp")
set (CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -O3 -g -fPIC -fopenmp")
# Set the output folder where your program will be created
set(CMAKE_BINARY_DIR ${CMAKE_SOURCE_DIR}/bin)
set(EXECUTABLE_OUTPUT_PATH ${CMAKE_BINARY_DIR})
set(LIBRARY_OUTPUT_PATH ${CMAKE_SOURCE_DIR}/lib)
# The following folder will be included
include_directories("${PROJECT_SOURCE_DIR}")
set(atomicqueue_INCLUDE "/usr/include/atomic_queue")
# set up our target executable and specify its dependencies and includes
add_executable(mmmulti
${CMAKE_SOURCE_DIR}/src/main.cpp
)
target_include_directories(mmmulti PUBLIC
"${CMAKE_SOURCE_DIR}/src"
# "${sdsl-lite_INCLUDE}"
# "${sdsl-lite-divsufsort_INCLUDE}"
# "${dynamic_INCLUDE}"
# "${ips4o_INCLUDE}"
"${atomicqueue_INCLUDE}"
# "${paryfor_INCLUDE}"
# "${tayweeargs_INCLUDE}"
)
# macOS doesn't want you to link in libatomic this way
if (${CMAKE_SYSTEM_NAME} MATCHES "Darwin")
target_link_libraries(mmmulti
"${sdsl-lite_LIB}/libsdsl.a"
"${sdsl-lite-divsufsort_LIB}/libdivsufsort.a"
"${sdsl-lite-divsufsort_LIB}/libdivsufsort64.a"
Threads::Threads
)
elseif (TRUE)
target_link_libraries(mmmulti
"-lsdsl"
"-ldivsufsort"
"-ldivsufsort64"
"-latomic"
Threads::Threads
)
endif()
if (APPLE)
elseif (TRUE)
# this was hard to track down
# https://stackoverflow.com/questions/35116327/when-g-static-link-pthread-cause-segmentation-fault-why
set (CMAKE_SHARED_LINKER_FLAGS "-lpthread -Wl,--as-needed")
endif()
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