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Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
Upstream-Name: libmstoolkit
Source: https://github.com/mhoopmann/mstoolkit

License: Apache
 .
 Licensed under the Apache License, Version 2.0 (the "License"); you
 may not use this file except in compliance with the License.  You may
 obtain a copy of the License at
 .
 http://www.apache.org/licenses/LICENSE-2.0
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 Unless required by applicable law or agreed to in writing, software
 distributed under the License is distributed on an "AS IS" BASIS,
 WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or
 implied.  See the License for the specific language governing
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License: Artistic
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 Copyright (c) 2000-2006, The Perl Foundation.
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 license document, but changing it is not allowed.
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 Preamble
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 This license establishes the terms under which a given free software
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License: BSD-3-Clause
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 Redistribution and use in source and binary forms, with or without
 modification, are permitted provided that the following conditions
 are met: 
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 1. Redistributions of source code must retain the above copyright
 notice, this list of conditions and the following disclaimer.  
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 2. Redistributions in binary form must reproduce the above copyright
 notice, this list of conditions and the following disclaimer in the
 documentation and/or other materials provided with the distribution.
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 3. Neither the name of the copyright holder nor the names of its
 contributors may be used to endorse or promote products derived from
 this software without specific prior written permission.  
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 THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
 "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT
 LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR
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 HOLDER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT,
 INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING,
 BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS
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 AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT
 LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY
 WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
 POSSIBILITY OF SUCH DAMAGE.

License: GPL-3+
 This package is free software; you can redistribute it and/or modify
 it under the terms of the GNU General Public License as published by
 the Free Software Foundation; either version 3 of the License, or (at
 your option) any later version.
 .
 This package is distributed in the hope that it will be useful, but
 WITHOUT ANY WARRANTY; without even the implied warranty of
 MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
 General Public License for more details.
 .
 You should have received a copy of the GNU General Public License
 along with this program. If not, see <http://www.gnu.org/licenses/>
 .
 On Debian systems, the complete text of the GNU General Public
 License version 3 can be found in "/usr/share/common-licenses/GPL-3".

License: Zlib
 .
 This software is provided 'as-is', without any express or implied
 warranty.  In no event will the authors be held liable for any
 damages arising from the use of this software.
 .
 Permission is granted to anyone to use this software for any purpose,
 including commercial applications, and to alter it and redistribute
 it freely, subject to the following restrictions:
 .
 1. The origin of this software must not be misrepresented; you must
    not claim that you wrote the original software. If you use this
    software in a product, an acknowledgment in the product
    documentation would be appreciated but is not required.
 .   
 2. Altered source versions must be plainly marked as such, and must
    not be misrepresented as being the original software.
 .
 3. This notice may not be removed or altered from any source
    distribution.
 .
 Jean-loup Gailly        Mark Adler
 jloup@gzip.org          madler@alumni.caltech.edu
 .
 The data format used by the zlib library is described by RFCs
 (Request for Comments) 1950 to 1952 in the files
 ftp://ds.internic.net/rfc/rfc1950.txt (zlib format), rfc1951.txt
 (deflate format) and rfc1952.txt (gzip format).


Files: Makefile
 README.md
 MSSingleScan/MSSingleScan.cpp
Copyright: 2011 Michael R. Hoopmann, Institute for Systems Biology
License: Apache

Files: src/MSToolkit/*
Copyright: 2005-2016 Michael R. Hoopmann
License: Apache

Files: src/mzParser/saxmzxmlhandler.cpp
Copyright: 2002 Pedrioli Patrick Institute for Systems Biology
           2008 Ronald Beavis
           2010 Mike Hoopmann Institute for Systems Biology
License: Artistic

files: src/mzParser/saxmzmlhandler.cpp
Copyright: 2002 Pedrioli Patrick Institute for Systems Biology
           2005 Fredrik Levander, Brendan MacLean, Patrick Lacasse
           2008 Ronald Beavis
           2009 Fredrik Levander
           2010 Mike Hoopmann Institute for Systems Biology
License: Artistic

Files: src/mzParser/saxhandler.cpp
Copyright: 2003-2004 Ronald C Beavis
License: Artistic

Files: src/mzParser/BasicSpectrum.cpp
Copyright: 2010-2012, Mike Hoopmann Institute for Systems Biology
License: Apache

Files: include/MSNumpress.hpp src/mzParser/MSNumpress.cpp
Copyright: 2013 Johan Teleman
License: Apache

Files: src/mzParser/Czran.cpp
Copyright: 2005 Mark Adler
License: Zlib

Files: src/mzParser/BasicChromatogram.cpp src/mzParser/PWIZface.cpp src/mzParser/RAMPface.cpp src/mzParser/mz5handler.cpp src/mzParser/mzMLReader.cpp src/mzParser/mzpMz5Config.cpp src/mzParser/mzpMz5Structs.cpp 
Copyright: 2011 Mike Hoopmann, Institute for Systems Biology
License: BSD-3-Clause

Files: src/mzParser/mzp_base64.cpp
Copyright: The Global Proteome Machine Organization
License: Artistic

Files: include/MSObject.h include/MSReader.h include/MSToolkitTypes.h include/RAWReader.h include/Spectrum.h include/mzMLWriter.h include/mzParser.h include/pepXMLWriter.h
Copyright: 2005-2016, Michael R. Hoopmann
License: Apache

Files: debian/*
Copyright: 2014-2020 Filippo Rusconi <lopippo@debian.org>
License: GPL-3+