1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
|
Column Headings:
1) One-letter code
2) Three-letter code
3) Name
4) Chou-Fasman code for helix propensity
5) Chou-Fasman code for sheet propensity
6) Chou-Fasman helix propensity values
7) Chou-Fasman sheet propensity values
8) Amino acid molecular weight
9) pKa value for free amino acid carboxylate
10) pKa value for free amino acid amine
11) pKa value for amino acid side chain
12) Number of carbon atoms in amino acid
13) Number of hydrogen atoms in amino acid zwitterion
14) Number of nitrogen atoms in amino acid
15) Number of oxygen atoms in amino acid
16) Number of sulfur atoms in amino acid
17) Area in the standard state (standard state accessibility is defined
as the average surface area that residue has in a ensemble
of Gly-X-Gly tripeptides)
18) Average accessible area in proteins
19) Average are buried upon transfer from the standard state to the folded protein.
20) Mean fractional area loss, equal to the average area buried normalized
by the standard state area
21) Residue mass
22) Monoisotopic Mass
A, ALA , Alanine , H, I ,1.45 ,0.97 ,89.09 ,2.3 ,9.9 , ,3 ,7 ,1,2, ,118.1,31.5 ,86.6 ,.74,71.08 ,71.03711
C, CYS , Cysteine , i, h ,0.77 ,1.30 ,121.16 ,1.8 ,10.8 ,8.65,3 ,7 ,1,2,1,146.1,13.9 ,132.3,.91,103.14,103.00919
D, ASP , Aspartic Acid , i, i ,0.98 ,0.80 ,133.10 ,2.0 ,10.0 ,4.04,4 ,7 ,1,4, ,158.7,60.9 ,97.8 ,.62,115.09,115.02694
E, GLU , Glutamic Acid , H, B ,1.53 ,0.26 ,147.13 ,2.2 ,9.7 ,4.39,5 ,9 ,1,4, ,186.2,72.3 ,113.9,.62,129.12,129.04259
F, PHE , Phenylalanine , h, h ,1.12 ,1.28 ,165.19 ,1.8 ,9.1 , ,9 ,11,1,2, ,222.8,28.7 ,194.1,.88,147.18,147.06841
G, GLY , Glycine , B, i ,0.53 ,0.81 ,75.07 ,2.4 ,9.8 , ,2 ,5 ,1,2, ,88.1 ,25.2 ,62.9 ,.72,57.05 ,57.02146
H, HIS , Histidine , h, b ,1.24 ,0.71 ,155.16 ,1.8 ,9.2 ,6.75,6 ,9 ,3,2, ,202.5,46.7 ,155.8,.78,137.14,137.05891
I, ILE , Isoleucine , I, H ,1.00 ,1.60 ,131.17 ,2.4 ,9.7 , ,6 ,13,1,2, ,181 ,23 ,158 ,.88,113.16,113.08406
K, LYS , Lysine , I, b ,1.07 ,0.74 ,146.19 ,2.2 ,9.2 ,11.0,6 ,14,2,2, ,225.8,110.3,115.5,.52,128.17,128.09496
L, LEU , Leucine , H, h ,1.34 ,1.22 ,131.17 ,2.4 ,9.60 , ,6 ,13,1,2, ,193.1,29 ,164.1,.85,113.16,113.08406
M, MET , Methionine , h, H ,1.20 ,1.67 ,149.21 ,2.3 ,9.2 , ,5 ,11,1,2,1,203.4,30.5 ,172.9,.85,131.19,131.04049
N, ASN , Asparagine , b, b ,0.73 ,0.65 ,132.12 ,2.0 ,8.8 , ,4 ,8 ,2,3, ,165.5,62.2 ,103.3,.63,114.10,114.04293
P, PRO , Proline , B, b ,0.59 ,0.62 ,115.13 ,2.0 ,10.6 , ,5 ,9 ,1,2, ,146.8,53.7 ,92.9 ,.64,97.12 ,97.05276
Q, GLN , Glutamine , h, h ,1.17 ,1.23 ,146.15 ,2.2 ,9.1 , ,5 ,10,2,3, ,193.2,74 ,119.2,.62,128.13,128.05858
R, ARG , Arginine , i, i ,0.79 ,0.90 ,174.20 ,1.8 ,9.0 ,12.5,6 ,14,4,2, ,256 ,93.8 ,162.2,.64,156.19,156.10111
S, SER , Serine , i, b ,0.79 ,0.72 ,105.09 ,2.1 ,9.2 , ,3 ,7 ,1,3, ,129.8,44.2 ,85.6 ,.66,87.08 ,87.03203
T, THR , Threonine , i, h ,0.82 ,1.20 ,119.12 ,2.6 ,10.4 , ,4 ,9 ,1,3, ,152.5,46 ,106.5,.70,101.11,101.04768
V, VAL , Valine , h, H ,1.14 ,1.65 ,117.15 ,2.3 ,9.6 , ,5 ,11,1,2, ,164.5,23.5 ,141 ,.86,99.13 ,99.06841
W, TRP , Tryptophan , h, h ,1.14 ,1.19 ,204.22 ,2.4 ,9.4 , ,11,12,2,2, ,266.3,41.7 ,224.6,.85,186.21,186.07931
Y, TYR , Tyrosine , b, h ,0.61 ,1.29 ,181.19 ,2.20,9.1 ,9.75,9 ,11,1,3, ,236.8,59.1 ,177.7,.76,163.18,163.06333
|
