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//
// File: test_cborpsmmap.cpp
// Created by: Olivier Langella
// Created on: 8/7/2025
//
/*******************************************************************************
* Copyright (c) 2025 Olivier Langella <Olivier.Langella@universite-paris-saclay.fr>.
*
* This file is part of the PAPPSOms++ library.
*
* PAPPSOms++ is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation, either version 3 of the License, or
* (at your option) any later version.
*
* PAPPSOms++ is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU General Public License for more details.
*
* You should have received a copy of the GNU General Public License
* along with PAPPSOms++. If not, see <http://www.gnu.org/licenses/>.
*
******************************************************************************/
// ./tests/catch2-only-tests [psmmap] -s
#include <catch2/catch_test_macros.hpp>
#include <pappsomspp/core/processing/cbor/psm/psmproteinmap.h>
#include <QBuffer>
TEST_CASE("cbor psm map test suite.", "[psmmap]")
{
// Set the debugging message formatting pattern.
qSetMessagePattern(QString("%{file}@%{line}, %{function}(): %{message}"));
SECTION("..:: PSM cbor map ::..", "[psmmap]")
{
pappso::cbor::psm::PsmProteinMap protein_map;
pappso::cbor::psm::PsmProtein psm_protein;
psm_protein.protein_sp = std::make_shared<pappso::Protein>(
"cry1Ac", "MDNNPNINECIPYNCLSNPEVEVLGGERIETGYTPIDISLSLTQFLLSEFVPGAGFVLGLVDIIWGIFGPSQWD");
psm_protein.isTarget = false;
protein_map.insert(psm_protein);
psm_protein.protein_sp = std::make_shared<pappso::Protein>(
"cry1Ac-2 the protein I like",
"MDNNPNINECIPYNCLSNPEVEVLGGERIETGYTPIDISLSLTQFLLSEFVPGAGFVLGLVDIIWGIFGPSQWD");
psm_protein.isTarget = true;
protein_map.insert(psm_protein);
REQUIRE(protein_map.size() == 2);
QBuffer buffer;
buffer.open(QIODevice::ReadWrite);
pappso::cbor::CborStreamWriter writer(&buffer);
protein_map.writeMap(writer);
pappso::cbor::psm::PsmProteinMap new_protein_map;
buffer.seek(0);
pappso::cbor::CborStreamReader reader(&buffer);
new_protein_map.readMap(reader);
REQUIRE(new_protein_map.size() == 2);
REQUIRE(
new_protein_map.getByAccession("cry1Ac-2").protein_sp.get()->getAccession().toStdString() ==
"cry1Ac-2");
REQUIRE(
new_protein_map.getByAccession("cry1Ac-2").protein_sp.get()->getDescription().toStdString() ==
"the protein I like");
REQUIRE(new_protein_map.getByAccession("cry1Ac-2").isTarget == true);
REQUIRE(new_protein_map.getByAccession("cry1Ac").isTarget == false);
}
}
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