1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300
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data_comp_list
loop_
_chem_comp.id
_chem_comp.three_letter_code
_chem_comp.name
_chem_comp.group
_chem_comp.number_atoms_all
_chem_comp.number_atoms_nh
_chem_comp.desc_level
Z57-a Z57-a (1S)-1,5-anhydro-1-(4-bromo-2,5-dihydroxyphenyl)-D-glucitol pyranose 35 20 .
data_comp_Z57-a
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.type_energy
_chem_comp_atom.charge
_chem_comp_atom.x
_chem_comp_atom.y
_chem_comp_atom.z
Z57-a C1A C CR6 0 33.838 24.351 30.085
Z57-a O1 O OH1 0 32.566 24.871 30.160
Z57-a C2A C CR6 0 34.186 23.353 29.159
Z57-a C3A C CR16 0 35.501 22.883 29.146
Z57-a C4A C CR6 0 36.451 23.378 30.032
Z57-a O4A O OH1 0 37.739 22.898 30.004
Z57-a C5A C CR6 0 36.075 24.366 30.943
Z57-a BR5 BR BR 0 37.352 25.057 32.160
Z57-a C6A C CR16 0 34.777 24.855 30.975
Z57-a C1 C CH1 0 33.179 22.794 28.177
Z57-a C2 C CH1 0 33.413 23.314 26.757
Z57-a O2 O OH1 0 33.214 24.731 26.730
Z57-a C3 C CH1 0 32.456 22.641 25.774
Z57-a O3 O OH1 0 32.782 23.029 24.440
Z57-a C4 C CH1 0 32.517 21.124 25.904
Z57-a O4 O OH1 0 31.521 20.523 25.078
Z57-a C5 C CH1 0 32.292 20.710 27.364
Z57-a O5 O O2 0 33.266 21.360 28.205
Z57-a C6 C CH2 0 32.431 19.221 27.595
Z57-a O6 O OH1 0 33.736 18.751 27.258
Z57-a HO1 H H 0 32.450 25.724 30.173
Z57-a H3A H H 0 35.746 22.218 28.529
Z57-a HO4A H H 0 37.899 22.105 29.710
Z57-a H6 H H 0 34.535 25.520 31.592
Z57-a H1 H H 0 32.269 23.054 28.462
Z57-a H2 H H 0 34.344 23.119 26.488
Z57-a HO2 H H 0 33.475 25.032 25.989
Z57-a H3 H H 0 31.532 22.936 25.971
Z57-a HO3 H H 0 32.159 22.791 23.927
Z57-a H4 H H 0 33.406 20.816 25.612
Z57-a HO4 H H 0 30.752 20.771 25.318
Z57-a H5 H H 0 31.388 20.997 27.641
Z57-a H61 H H 0 31.767 18.744 27.056
Z57-a H62 H H 0 32.254 19.024 28.539
Z57-a HO6 H H 0 34.309 19.120 27.763
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.type
_chem_comp_bond.aromatic
_chem_comp_bond.value_dist_nucleus
_chem_comp_bond.value_dist_nucleus_esd
_chem_comp_bond.value_dist
_chem_comp_bond.value_dist_esd
Z57-a C1A C2A DOUBLE y 1.398 0.0100 1.398 0.0100
Z57-a C1A O1 SINGLE n 1.374 0.0155 1.374 0.0155
Z57-a C1A C6A SINGLE y 1.384 0.0109 1.384 0.0109
Z57-a C2A C1 SINGLE n 1.510 0.0100 1.510 0.0100
Z57-a C2A C3A SINGLE y 1.390 0.0100 1.390 0.0100
Z57-a C3A C4A DOUBLE y 1.386 0.0100 1.386 0.0100
Z57-a C4A O4A SINGLE n 1.374 0.0155 1.374 0.0155
Z57-a C4A C5A SINGLE y 1.393 0.0117 1.393 0.0117
Z57-a C5A C6A DOUBLE y 1.385 0.0100 1.385 0.0100
Z57-a C5A BR5 SINGLE n 1.894 0.0100 1.894 0.0100
Z57-a C1 C2 SINGLE n 1.528 0.0100 1.528 0.0100
Z57-a C1 O5 SINGLE n 1.432 0.0124 1.432 0.0124
Z57-a C2 C3 SINGLE n 1.527 0.0100 1.527 0.0100
Z57-a C2 O2 SINGLE n 1.431 0.0107 1.431 0.0107
Z57-a C3 O3 SINGLE n 1.427 0.0125 1.427 0.0125
Z57-a C3 C4 SINGLE n 1.520 0.0154 1.520 0.0154
Z57-a C4 O4 SINGLE n 1.425 0.0176 1.425 0.0176
Z57-a C4 C5 SINGLE n 1.524 0.0200 1.524 0.0200
Z57-a C5 C6 SINGLE n 1.511 0.0136 1.511 0.0136
Z57-a C5 O5 SINGLE n 1.439 0.0100 1.439 0.0100
Z57-a C6 O6 SINGLE n 1.426 0.0200 1.426 0.0200
Z57-a O1 HO1 SINGLE n 0.966 0.0059 0.861 0.0200
Z57-a C3A H3A SINGLE n 1.082 0.0130 0.940 0.0137
Z57-a O4A HO4A SINGLE n 0.966 0.0059 0.861 0.0200
Z57-a C6A H6 SINGLE n 1.082 0.0130 0.939 0.0104
Z57-a C1 H1 SINGLE n 1.089 0.0100 0.989 0.0100
Z57-a C2 H2 SINGLE n 1.089 0.0100 0.988 0.0151
Z57-a O2 HO2 SINGLE n 0.970 0.0120 0.841 0.0200
Z57-a C3 H3 SINGLE n 1.089 0.0100 0.990 0.0140
Z57-a O3 HO3 SINGLE n 0.970 0.0120 0.841 0.0200
Z57-a C4 H4 SINGLE n 1.089 0.0100 0.986 0.0131
Z57-a O4 HO4 SINGLE n 0.970 0.0120 0.841 0.0200
Z57-a C5 H5 SINGLE n 1.089 0.0100 0.988 0.0182
Z57-a C6 H61 SINGLE n 1.089 0.0100 0.980 0.0184
Z57-a C6 H62 SINGLE n 1.089 0.0100 0.980 0.0184
Z57-a O6 HO6 SINGLE n 0.970 0.0120 0.848 0.0200
loop_
_chem_comp_angle.comp_id
_chem_comp_angle.atom_id_1
_chem_comp_angle.atom_id_2
_chem_comp_angle.atom_id_3
_chem_comp_angle.value_angle
_chem_comp_angle.value_angle_esd
Z57-a C2A C1A O1 119.729 3.00
Z57-a C2A C1A C6A 120.542 1.50
Z57-a O1 C1A C6A 119.729 3.00
Z57-a C1A O1 HO1 120.000 3.00
Z57-a C1A C2A C1 120.931 2.27
Z57-a C1A C2A C3A 118.667 1.50
Z57-a C1 C2A C3A 120.402 1.50
Z57-a C2A C3A C4A 120.515 1.50
Z57-a C2A C3A H3A 119.485 1.50
Z57-a C4A C3A H3A 119.998 1.50
Z57-a C3A C4A O4A 120.374 3.00
Z57-a C3A C4A C5A 119.253 1.50
Z57-a O4A C4A C5A 120.374 3.00
Z57-a C4A O4A HO4A 120.000 3.00
Z57-a C4A C5A C6A 121.650 1.50
Z57-a C4A C5A BR5 119.319 1.50
Z57-a C6A C5A BR5 119.032 1.50
Z57-a C1A C6A C5A 119.376 1.50
Z57-a C1A C6A H6 120.234 1.50
Z57-a C5A C6A H6 120.390 1.50
Z57-a C2A C1 C2 112.164 2.36
Z57-a C2A C1 O5 107.987 1.50
Z57-a C2A C1 H1 108.577 1.50
Z57-a C2 C1 O5 110.064 1.62
Z57-a C2 C1 H1 108.791 1.50
Z57-a O5 C1 H1 108.606 1.50
Z57-a C1 C2 C3 110.123 3.00
Z57-a C1 C2 O2 109.334 1.86
Z57-a C1 C2 H2 109.340 1.50
Z57-a C3 C2 O2 110.081 2.02
Z57-a C3 C2 H2 109.166 1.50
Z57-a O2 C2 H2 108.790 1.50
Z57-a C2 O2 HO2 109.099 3.00
Z57-a C2 C3 O3 110.081 2.02
Z57-a C2 C3 C4 110.796 1.54
Z57-a C2 C3 H3 109.166 1.50
Z57-a O3 C3 C4 110.243 1.88
Z57-a O3 C3 H3 108.767 1.50
Z57-a C4 C3 H3 108.653 1.50
Z57-a C3 O3 HO3 108.895 2.41
Z57-a C3 C4 O4 110.101 1.97
Z57-a C3 C4 C5 110.272 1.76
Z57-a C3 C4 H4 109.032 1.50
Z57-a O4 C4 C5 109.072 2.07
Z57-a O4 C4 H4 109.194 1.50
Z57-a C5 C4 H4 109.223 1.50
Z57-a C4 O4 HO4 109.564 3.00
Z57-a C4 C5 C6 112.996 1.59
Z57-a C4 C5 O5 109.378 1.54
Z57-a C4 C5 H5 108.960 1.50
Z57-a C6 C5 O5 107.094 1.51
Z57-a C6 C5 H5 109.269 1.50
Z57-a O5 C5 H5 108.995 1.50
Z57-a C1 O5 C5 112.489 1.50
Z57-a C5 C6 O6 111.299 2.09
Z57-a C5 C6 H61 109.363 1.50
Z57-a C5 C6 H62 109.363 1.50
Z57-a O6 C6 H61 109.265 1.50
Z57-a O6 C6 H62 109.265 1.50
Z57-a H61 C6 H62 108.155 1.50
Z57-a C6 O6 HO6 109.472 2.41
loop_
_chem_comp_tor.comp_id
_chem_comp_tor.id
_chem_comp_tor.atom_id_1
_chem_comp_tor.atom_id_2
_chem_comp_tor.atom_id_3
_chem_comp_tor.atom_id_4
_chem_comp_tor.value_angle
_chem_comp_tor.value_angle_esd
_chem_comp_tor.period
Z57-a nu0 C1 O5 C5 C4 64.556 10.0 3
Z57-a nu1 O5 C5 C4 C3 -57.107 10.0 3
Z57-a nu2 C5 C4 C3 C2 51.141 10.0 3
Z57-a nu3 C4 C3 C2 C1 -51.182 10.0 3
Z57-a nu4 C3 C2 C1 O5 57.407 10.0 3
Z57-a nu5 C2 C1 O5 C5 -64.832 10.0 3
Z57-a const_sp2_sp2_1 C6A C1A C2A C3A 0.000 5.0 2
Z57-a const_sp2_sp2_2 C6A C1A C2A C1 180.000 5.0 2
Z57-a const_sp2_sp2_3 O1 C1A C2A C3A 180.000 5.0 2
Z57-a const_sp2_sp2_4 O1 C1A C2A C1 0.000 5.0 2
Z57-a const_sp2_sp2_5 C1A C2A C3A C4A 0.000 5.0 2
Z57-a const_sp2_sp2_6 C1A C2A C3A H3A 180.000 5.0 2
Z57-a const_sp2_sp2_7 C1 C2A C3A C4A 180.000 5.0 2
Z57-a const_sp2_sp2_8 C1 C2A C3A H3A 0.000 5.0 2
Z57-a const_sp2_sp2_9 C2A C3A C4A C5A 0.000 5.0 2
Z57-a const_10 C2A C3A C4A O4A 180.000 10.0 2
Z57-a const_11 H3A C3A C4A C5A 180.000 10.0 2
Z57-a const_12 H3A C3A C4A O4A 0.000 10.0 2
Z57-a const_13 C3A C4A C5A C6A 0.000 10.0 2
Z57-a const_14 C3A C4A C5A BR5 180.000 10.0 2
Z57-a const_15 O4A C4A C5A C6A 180.000 10.0 2
Z57-a const_16 O4A C4A C5A BR5 0.000 10.0 2
Z57-a const_17 C4A C5A C6A C1A 0.000 10.0 2
Z57-a const_18 C4A C5A C6A H6 180.000 10.0 2
Z57-a const_19 BR5 C5A C6A C1A 180.000 10.0 2
Z57-a const_20 BR5 C5A C6A H6 0.000 10.0 2
Z57-a sp2_sp2_1 C2A C1A O1 HO1 180.000 5.0 2
Z57-a sp2_sp2_2 C6A C1A O1 HO1 0.000 5.0 2
Z57-a const_21 C2A C1A C6A C5A 0.000 10.0 2
Z57-a const_22 C2A C1A C6A H6 180.000 10.0 2
Z57-a const_23 O1 C1A C6A C5A 180.000 10.0 2
Z57-a const_24 O1 C1A C6A H6 0.000 10.0 2
Z57-a sp2_sp3_1 C1A C2A C1 C2 150.000 10.0 6
Z57-a sp2_sp3_2 C1A C2A C1 O5 -90.000 10.0 6
Z57-a sp2_sp3_3 C1A C2A C1 H1 30.000 10.0 6
Z57-a sp2_sp3_4 C3A C2A C1 C2 -30.000 10.0 6
Z57-a sp2_sp3_5 C3A C2A C1 O5 90.000 10.0 6
Z57-a sp2_sp3_6 C3A C2A C1 H1 -150.000 10.0 6
Z57-a sp2_sp2_3 C3A C4A O4A HO4A 180.000 5.0 2
Z57-a sp2_sp2_4 C5A C4A O4A HO4A 0.000 5.0 2
Z57-a sp3_sp3_43 C1 C2 O2 HO2 180.000 10.0 3
Z57-a sp3_sp3_44 C3 C2 O2 HO2 60.000 10.0 3
Z57-a sp3_sp3_45 H2 C2 O2 HO2 -60.000 10.0 3
Z57-a sp3_sp3_46 C2 C3 O3 HO3 180.000 10.0 3
Z57-a sp3_sp3_47 C4 C3 O3 HO3 60.000 10.0 3
Z57-a sp3_sp3_48 H3 C3 O3 HO3 -60.000 10.0 3
Z57-a sp3_sp3_49 C3 C4 O4 HO4 180.000 10.0 3
Z57-a sp3_sp3_50 C5 C4 O4 HO4 60.000 10.0 3
Z57-a sp3_sp3_51 H4 C4 O4 HO4 -60.000 10.0 3
Z57-a sp3_sp3_52 C4 C5 C6 O6 180.000 10.0 3
Z57-a sp3_sp3_53 C4 C5 C6 H61 -60.000 10.0 3
Z57-a sp3_sp3_54 C4 C5 C6 H62 60.000 10.0 3
Z57-a sp3_sp3_55 O5 C5 C6 O6 60.000 10.0 3
Z57-a sp3_sp3_56 O5 C5 C6 H61 180.000 10.0 3
Z57-a sp3_sp3_57 O5 C5 C6 H62 -60.000 10.0 3
Z57-a sp3_sp3_58 H5 C5 C6 O6 -60.000 10.0 3
Z57-a sp3_sp3_59 H5 C5 C6 H61 60.000 10.0 3
Z57-a sp3_sp3_60 H5 C5 C6 H62 180.000 10.0 3
Z57-a sp3_sp3_61 C5 C6 O6 HO6 180.000 10.0 3
Z57-a sp3_sp3_62 H61 C6 O6 HO6 60.000 10.0 3
Z57-a sp3_sp3_63 H62 C6 O6 HO6 -60.000 10.0 3
loop_
_chem_comp_chir.comp_id
_chem_comp_chir.id
_chem_comp_chir.atom_id_centre
_chem_comp_chir.atom_id_1
_chem_comp_chir.atom_id_2
_chem_comp_chir.atom_id_3
_chem_comp_chir.volume_sign
Z57-a chir_1 C1 O5 C2 C2A positive
Z57-a chir_2 C2 O2 C1 C3 negative
Z57-a chir_3 C3 O3 C4 C2 negative
Z57-a chir_4 C4 O4 C5 C3 positive
Z57-a chir_5 C5 O5 C4 C6 negative
loop_
_chem_comp_plane_atom.comp_id
_chem_comp_plane_atom.plane_id
_chem_comp_plane_atom.atom_id
_chem_comp_plane_atom.dist_esd
Z57-a plan-1 BR5 0.020
Z57-a plan-1 C1 0.020
Z57-a plan-1 C1A 0.020
Z57-a plan-1 C2A 0.020
Z57-a plan-1 C3A 0.020
Z57-a plan-1 C4A 0.020
Z57-a plan-1 C5A 0.020
Z57-a plan-1 C6A 0.020
Z57-a plan-1 H3A 0.020
Z57-a plan-1 H6 0.020
Z57-a plan-1 O1 0.020
Z57-a plan-1 O4A 0.020
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
Z57-a SMILES ACDLabs 12.01 Brc1c(O)cc(c(O)c1)C2OC(CO)C(O)C(O)C2O
Z57-a SMILES_CANONICAL CACTVS 3.370 OC[C@H]1O[C@H]([C@H](O)[C@@H](O)[C@@H]1O)c2cc(O)c(Br)cc2O
Z57-a SMILES CACTVS 3.370 OC[CH]1O[CH]([CH](O)[CH](O)[CH]1O)c2cc(O)c(Br)cc2O
Z57-a SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 c1c(c(cc(c1O)Br)O)[C@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CO)O)O)O
Z57-a SMILES "OpenEye OEToolkits" 1.7.0 c1c(c(cc(c1O)Br)O)C2C(C(C(C(O2)CO)O)O)O
Z57-a InChI InChI 1.03 InChI=1S/C12H15BrO7/c13-5-2-6(15)4(1-7(5)16)12-11(19)10(18)9(17)8(3-14)20-12/h1-2,8-12,14-19H,3H2/t8-,9-,10+,11-,12+/m1/s1
Z57-a InChIKey InChI 1.03 UXXJNKKJRCGMAK-ZIQFBCGOSA-N
loop_
_pdbx_chem_comp_description_generator.comp_id
_pdbx_chem_comp_description_generator.program_name
_pdbx_chem_comp_description_generator.program_version
_pdbx_chem_comp_description_generator.descriptor
Z57-a acedrg 243 "dictionary generator"
Z57-a acedrg_database 11 "data source"
Z57-a rdkit 2017.03.2 "Chemoinformatics tool"
Z57-a refmac5 5.8.0238 "optimization tool"
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