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## $Id$
##
## File: PDL::VectorValued.pm
## Author: Bryan Jurish <moocow@cpan.org>
## Description: Vector utilities for PDL: perl side only
##======================================================================
package PDL::VectorValued;
use strict;
use warnings;
##======================================================================
## Export hacks
use PDL;
use PDL::Exporter;
use PDL::VectorValued::Utils;
our @ISA = qw(PDL::Exporter);
our (@EXPORT_OK);
BEGIN {
##--------------------------------------------------------------------
## Conditional bindings for PDL > v2.079
## + see https://github.com/moocow-the-bovine/PDL-VectorValued/issues/5,
## https://github.com/moocow-the-bovine/PDL-VectorValued/pull/8
## @VV_SYMBOLS : exportable symbols (vv_FOO)
my @VV_SYMBOLS =
(
(@PDL::VectorValued::Utils::EXPORT_OK), ##-- inherited
qw(vv_uniqvec),
qw(vv_rleND vv_rldND),
qw(vv_indx),
);
# %VV_IMPORT: import these from PDL core if available (PDL > v2.079)
my %VV_IMPORT = (
vv_rlevec => {vv=>'rlevec', p=>PDL->can('rlevec')},
vv_rldvec => {vv=>'rldvec', p=>PDL->can('rldvec')},
vv_rleseq => {vv=>'rleseq', p=>PDL->can('rleseq')},
vv_rldseq => {vv=>'rldseq', p=>PDL->can('rldseq')},
vv_enumvec => {vv=>'enumvec', p=>PDL->can('enumvec')},
vv_enumvecg => {vv=>'enumvecg', p=>PDL->can('enumvecg')},
vv_vsearchvec => {vv=>'vsearchvec', p=>PDL->can('vsearchvec')},
vv_cmpvec => {vv=>'cmpvec', p=>PDL->can('cmpvec')},
vv_union => {vv=>'vv_union', p=>PDL->can('unionvec')},
vv_intersect => {vv=>'vv_intersect', p=>PDL->can('intersectvec')},
vv_setdiff => {vv=>'vv_setdiff', p=>PDL->can('setdiffvec')},
v_union => {vv=>'v_union', p=>PDL->can('union_sorted')},
v_intersect => {vv=>'v_intersect', p=>PDL->can('intersect_sorted')},
v_setdiff => {vv=>'v_setdiff', p=>PDL->can('setdiff_sorted')},
vv_rleND => {vv=>'rleND', p=>PDL->can('rleND')},
vv_rldND => {vv=>'rldND', p=>PDL->can('rldND')},
vv_vcos => {vv=>'vv_vcos', p=>PDL->can('vcos')},
#vv_indx => {vv=>'vv_indx', p=>PDL->can('indx')}, # DEBUG
);
@EXPORT_OK = @VV_SYMBOLS;
foreach my $vv_sym (@VV_SYMBOLS) {
no strict 'refs';
if ($VV_IMPORT{$vv_sym} && defined($VV_IMPORT{$vv_sym}{p})) {
# function lives in PDL core: import it here, and clobber $vv_sym here (but not in VV::Utils)
no warnings 'redefine';
*$vv_sym = *{$VV_IMPORT{$vv_sym}{vv}} = $VV_IMPORT{$vv_sym}{p};
}
elsif ($VV_IMPORT{$vv_sym}) {
# $sym is defined here as "vv_$sym" : bind it here & in PDL namespace
my $sym = $VV_IMPORT{$vv_sym}{vv};
${PDL::}{$sym} = *$sym = *$vv_sym;
# ... and make it exportable
push(@EXPORT_OK, $sym);
}
}
}
our %EXPORT_TAGS =
(
Func => [@EXPORT_OK], ##-- respect PDL conventions (hopefully)
);
## VERSION was formerly set by PDL::VectorValued::Version, now use perl-reversion from Perl::Version instead
our $VERSION = '1.0.23';
##======================================================================
## pod: header
=pod
=head1 NAME
PDL::VectorValued - Utilities for vector-valued PDLs
=head1 SYNOPSIS
use PDL;
use PDL::VectorValued;
##---------------------------------------------------------------------
## ... stuff happens
=cut
##======================================================================
## Description
=pod
=head1 DESCRIPTION
PDL::VectorValued provides generalizations of some elementary PDL
functions to higher-order PDLs which treat vectors as "data values".
=cut
##======================================================================
## pod: Aliases
=pod
=head1 ALIASES
To facilitate incorporation of selected vector-valued functions into
the PDL core, the PDL:PP-, XS-, C-, and perl-level functions defined by
this module in the C<PDL::VectorValued::Utils> package namespace
all carry a C<vv_> prefix as of PDL::VectorValued v1.0.19
Prior to v1.0.19, many of these functions (e.g. C<cmpvec()>)
were defined by this module without a C<vv_> prefix.
For PDL::VectorValued E<gt>= v1.0.19 and PDL E<gt> v2.079, most vector-valued
functions are expected to be defined in the PDL core. For such "moving" functions
C<FUNC>, the PDL core implementations will be imported into the C<PDL::VectorValued>
namespace as both C<FUNC> and C<vv_FUNC>, clobbering any local implementation
from the C<PDL::VectorValued::Utils> namespace. Local implementations
C<vv_FUNC> which were previously defined and exported as C<FUNC>
or for which no binding for C<*PDL::FUNC> exists will be bound to
both C<*PDL::VectorValued::FUNC> and C<*PDL::FUNC>, and exported by default,
for backwards-compatibility.
Functions expected to move to the PDL core are:
=over 4
=item *
New code should use C<FUNC()> or C<PDL::FUNC()>.
=item *
Backwards-compatible code can use C<FUNC()> or C<PDL::VectorValued::FUNC()>.
=item *
Direct use of C<PDL::VectorValued::Utils::vv_FUNC()> is deprecated.
=item *
Direct use of C<PDL::VectorValued::Utils::FUNC()> is likely broken as of
PDL::VectorValued v1.0.19.
=back
=cut
##======================================================================
## pod: Functions
=pod
=head1 FUNCTIONS
=cut
##----------------------------------------------------------------------
## vv_uniqvec
=pod
=head2 vv_uniqvec
=for sig
Signature: (v(N,M); [o]vu(N,MU))
=for ref
Drop-in replacement for broken uniqvec() which uses vv_qsortvec().
Otherwise copied from PDL::Primitive::primitive.pd.
See also: PDL::VectorValued::Utils::vv_qsortvec, PDL::Primitive::uniqvec.
=cut
*PDL::vv_uniqvec = \&vv_uniqvec;
sub vv_uniqvec {
my($pdl) = shift;
# slice is not cheap but uniqvec isn't either -- shouldn't cost too much.
return $pdl if($pdl->nelem == 0 || $pdl->ndims <2 || $pdl->slice("(0)")->nelem < 2);
my $srt = $pdl->mv(0,-1)->
clump($pdl->ndims - 1)->
mv(-1,0)->vv_qsortvec-> ##-- moo: Tue, 24 Apr 2007 17:17:39 +0200: use vv_qsortvec
mv(0,-1);
$srt=$srt->dice($srt->mv(0,-1)->ngoodover->which) if ($PDL::Bad::Status && $srt->badflag);
##use dice instead of nslice since qsortvec might be packing the badvals to the front of
#the array instead of the end like the docs say. If that is the case and it gets fixed,
#it won't bust uniqvec. DAL 14-March 2006
my $uniq = ($srt != $srt->rotate(-1)) -> mv(0,-1) -> orover->which;
return $uniq->nelem==0 ?
$srt->slice("0,:")->mv(0,-1) :
$srt->dice($uniq)->mv(0,-1);
}
##======================================================================
## Run-Length Encoding/Decoding: n-dimensionl
=pod
=head1 Higher-Order Run-Length Encoding and Decoding
The following functions generalize the builtin PDL functions rle() and rld()
for higher-order "values".
See also:
PDL::VectorValued::Utils::vv_rlevec(), PDL::VectorValued::Utils::vv_rldvec().
=cut
##----------------------------------------------------------------------
## rleND()
=pod
=head2 vv_rleND
=for sig
Signature: (data(@vdims,N); int [o]counts(N); [o]elts(@vdims,N))
=for ref
Run-length encode a set of (sorted) n-dimensional values.
Generalization of rle() and vv_rlevec():
given set of values $data, generate a vector $counts with the number of occurrences of each element
(where an "element" is a matrix of dimensions @vdims ocurring as a sequential run over the
final dimension in $data), and a set of vectors $elts containing the elements which begin a run.
Really just a wrapper for clump() and rlevec().
See also: PDL::Slices::rle, PDL::Ngrams::VectorValued::Utils::vv_rlevec.
=cut
*PDL::vv_rleND = \&vv_rleND if !defined &PDL::vv_rleND;
*rleND = sub {
my $data = shift;
my @vdimsN = $data->dims;
##-- construct output pdls
my $counts = $#_ >= 0 ? $_[0] : zeroes(long, $vdimsN[$#vdimsN]);
my $elts = $#_ >= 1 ? $_[1] : zeroes($data->type, @vdimsN);
##-- guts: call rlevec()
vv_rlevec($data->clump($#vdimsN), $counts, $elts->clump($#vdimsN));
return ($counts,$elts);
} if !defined &rleND;
##----------------------------------------------------------------------
## rldND()
=pod
=head2 vv_rldND
=for sig
Signature: (int counts(N); elts(@vdims,N); [o]data(@vdims,N);)
=for ref
Run-length decode a set of (sorted) n-dimensional values.
Generalization of rld() and rldvec():
given a vector $counts() of the number of occurrences of each @vdims-dimensioned element,
and a set $elts() of @vdims-dimensioned elements, run-length decode to $data().
Really just a wrapper for clump() and rldvec().
See also: PDL::Slices::rld, PDL::VectorValued::Utils::rldvec
=cut
*PDL::vv_rldND = \&vv_rldND if !defined &PDL::vv_rldND;
*rldND = sub {
my ($counts,$elts) = (shift,shift);
my @vdimsN = $elts->dims;
##-- construct output pdl
my ($data);
if ($#_ >= 0) { $data = $_[0]; }
else {
my $size = $counts->sumover->max; ##-- get maximum size for Nth-dimension for small encodings
my @countdims = $counts->dims;
shift(@countdims);
$data = zeroes($elts->type, @vdimsN, @countdims);
}
##-- guts: call rldvec()
vv_rldvec($counts, $elts->clump($#vdimsN), $data->clump($#vdimsN));
return $data;
} if !defined &rldND;
##======================================================================
## pod: Functions: datatype utilities
=pod
=head1 Datatype Utilities
=cut
##----------------------------------------------------------------------
## vv_indx()
=pod
=head2 vv_indx
=for sig
Signature: vv_indx()
=for ref
Returns PDL::Type subclass used for indices.
If built with PDL E<lt> v2.007, this should return C<PDL::long>, otherwise C<PDL::indx>.
=cut
sub vv_indx {
return defined(&PDL::indx) ? PDL::indx(@_) : PDL::long(@_);
}
##======================================================================
## pod: Functions: low-level
=pod
=head2 Low-Level Functions
Some additional low-level functions are provided in the
PDL::VectorValued::Utils
package.
See L<PDL::VectorValued::Utils> for details.
=cut
1; ##-- make perl happy
##======================================================================
## pod: Footer
=pod
=head1 ACKNOWLEDGEMENTS
perl by Larry Wall.
=head1 AUTHOR
Bryan Jurish E<lt>moocow@cpan.orgE<gt>
PDL by Karl Glazebrook, Tuomas J. Lukka, Christian Soeller, and others.
=head1 COPYRIGHT
Copyright (c) 2007-2022, Bryan Jurish. All rights reserved.
This package is free software. You may redistribute it
and/or modify it under the same terms as Perl itself.
=head1 SEE ALSO
perl(1), PDL(3perl), PDL::VectorValued::Utils(3perl)
=cut
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