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#********************************************************** MAXHOM AMINO ACID EXCHANGE MATRIX **********************************************
# see: McLachlan Andrew D., Tests for comparing related amino acid sequences. J.Mol.Biol. 61,409-424, minimal.
# 1971 value: -3.0 ; maximal value: 6.0
# symbols: "-BZX!" added
#
#============================================================================================================================================
STRUCTURE-STATES: 1
I/O-STATES: 1
#============================================================================================================================================
AA STR I/O V L I M F W Y G A P S T C H R K Q E N D B Z
V 5.00 2.00 2.00 1.00 0.00 -1.00 0.00 -1.00 0.00 -1.00 -1.00 0.00 -2.00 -1.00 -1.00 -1.00 -1.00 -1.00 -2.00 -2.00 -2.00 -1.00
L 2.00 5.00 2.00 3.00 2.00 0.00 0.00 -2.00 -1.00 -2.00 -1.00 0.00 -3.00 -1.00 -1.00 -1.00 0.00 -2.00 -2.00 -2.00 -2.00 0.00
I 2.00 2.00 5.00 2.00 0.00 0.00 0.00 -2.00 -1.00 -2.00 -1.00 0.00 -2.00 -1.00 -2.00 -2.00 -3.00 -2.00 -2.00 -3.00 -2.00 -3.00
M 1.00 3.00 2.00 5.00 2.00 -2.00 -1.00 -2.00 0.00 -2.00 -1.00 0.00 0.00 0.00 -2.00 -2.00 0.00 -2.00 -1.00 -1.00 -1.00 0.00
F 0.00 2.00 0.00 2.00 6.00 3.00 3.00 -3.00 -2.00 -2.00 -1.00 -2.00 -3.00 1.00 -2.00 -3.00 -3.00 -3.00 -3.00 -2.00 -3.00 -3.00
W -1.00 0.00 0.00 -2.00 3.00 6.00 3.00 -2.00 -2.00 -3.00 0.00 -1.00 -1.00 0.00 0.00 -2.00 -1.00 -2.00 -3.00 -3.00 -3.00 -1.00
Y 0.00 0.00 0.00 -1.00 3.00 3.00 6.00 -3.00 -2.00 -3.00 0.00 -2.00 -2.00 1.00 -1.00 -2.00 -2.00 -1.00 -1.00 -2.00 -1.00 -2.00
G -1.00 -2.00 -2.00 -2.00 -3.00 -2.00 -3.00 5.00 0.00 0.00 0.00 -1.00 -2.00 -1.00 0.00 0.00 -1.00 0.00 0.00 0.00 0.00 -1.00
A 0.00 -1.00 -1.00 0.00 -2.00 -2.00 -2.00 0.00 5.00 1.00 1.00 0.00 -2.00 0.00 -1.00 0.00 0.00 1.00 0.00 0.00 0.00 0.00
P -1.00 -2.00 -2.00 -2.00 -2.00 -3.00 -3.00 0.00 1.00 5.00 0.00 0.00 -3.00 0.00 0.00 0.00 0.00 1.00 -2.00 0.00 -2.00 0.00
S -1.00 -1.00 -1.00 -1.00 -1.00 0.00 0.00 0.00 1.00 0.00 5.00 2.00 -1.00 0.00 1.00 0.00 1.00 1.00 2.00 0.00 2.00 1.00
T 0.00 0.00 0.00 0.00 -2.00 -1.00 -2.00 -1.00 0.00 0.00 2.00 5.00 -1.00 1.00 0.00 0.00 0.00 1.00 0.00 0.00 0.00 0.00
C -2.00 -3.00 -2.00 0.00 -3.00 -1.00 -2.00 -2.00 -2.00 -3.00 -1.00 -1.00 6.00 0.00 -2.00 -3.00 -3.00 -3.00 -2.00 -2.00 -2.00 -3.00
H -1.00 -1.00 -1.00 0.00 1.00 0.00 1.00 -1.00 0.00 0.00 0.00 1.00 0.00 5.00 2.00 1.00 1.00 -1.00 1.00 1.00 1.00 1.00
R -1.00 -1.00 -2.00 -2.00 -2.00 0.00 -1.00 0.00 -1.00 0.00 1.00 0.00 -2.00 2.00 5.00 2.00 2.00 0.00 0.00 -2.00 0.00 2.00
K -1.00 -1.00 -2.00 -2.00 -3.00 -2.00 -2.00 0.00 0.00 0.00 0.00 0.00 -3.00 1.00 2.00 5.00 1.00 1.00 1.00 0.00 1.00 1.00
Q -1.00 0.00 -3.00 0.00 -3.00 -1.00 -2.00 -1.00 0.00 0.00 1.00 0.00 -3.00 1.00 2.00 1.00 5.00 2.00 1.00 1.00 1.00 5.00
E -1.00 -2.00 -2.00 -2.00 -3.00 -2.00 -1.00 0.00 1.00 1.00 1.00 1.00 -3.00 -1.00 0.00 1.00 2.00 5.00 1.00 2.00 1.00 2.00
N -2.00 -2.00 -2.00 -1.00 -3.00 -3.00 -1.00 0.00 0.00 -2.00 2.00 0.00 -2.00 1.00 0.00 1.00 1.00 1.00 5.00 2.00 5.00 1.00
D -2.00 -2.00 -3.00 -1.00 -2.00 -3.00 -2.00 0.00 0.00 0.00 0.00 0.00 -2.00 1.00 -2.00 0.00 1.00 2.00 2.00 5.00 2.00 1.00
B -2.00 -2.00 -2.00 -1.00 -3.00 -3.00 -1.00 0.00 0.00 -2.00 2.00 0.00 -2.00 1.00 0.00 1.00 1.00 1.00 5.00 2.00 5.00 1.00
Z -1.00 0.00 -3.00 0.00 -3.00 -1.00 -2.00 -1.00 0.00 0.00 1.00 0.00 -3.00 1.00 2.00 1.00 5.00 2.00 1.00 1.00 1.00 5.00
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