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/*
Copyright (C) 2008-2015 Michele Martone
This file is part of librsb.
librsb is free software; you can redistribute it and/or modify it
under the terms of the GNU Lesser General Public License as published
by the Free Software Foundation; either version 3 of the License, or
(at your option) any later version.
librsb is distributed in the hope that it will be useful, but WITHOUT
ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
FITNESS FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public
License for more details.
You should have received a copy of the GNU Lesser General Public
License along with librsb; see the file COPYING.
If not, see <http://www.gnu.org/licenses/>.
*/
/* @cond INNERDOC */
/**
* @file
* @author Michele Martone
* @brief
* Auxiliary functionalities file.
*/
#include <stdlib.h>
#include "rsb.h"
#include "rsb_internals.h"
/* void qsort(void *base, size_t nmemb, size_t size,
int(*compar)(const void *, const void *)); */
extern struct rsb_session_handle_t rsb_global_session_handle;
#if 0
/* 20121001 old code, declaring static vars */
/**
* \ingroup gr_internals
* \brief An internal use only structure.
* */
static struct nzinfo
{
int i; /* index */
int n; /* value */
rsb_flags_t flags;
};
#define BLOCK_START 1
const struct nzinfo *g_sort_array;
static int rsb_compar_nzinfo(const void * ap, const void * bp)
{
int a=*(int*)ap;
int b=*(int*)bp;
return ( g_sort_array[a].n - g_sort_array[b].n );
}
static void rsb_qsort_nzinfo(const struct nzinfo*nnzpr, const struct nzinfo*nnzpc, rsb_coo_idx_t *nnzpr_s, rsb_coo_idx_t *nnzpc_s, size_t rows, size_t columns)
{
/* sort by smallest */
g_sort_array=nnzpr;
qsort( nnzpr_s , (size_t)rows , sizeof(rsb_coo_idx_t), &rsb_compar_nzinfo );
g_sort_array=nnzpc;
qsort( nnzpc_s , (size_t)columns, sizeof(rsb_coo_idx_t), &rsb_compar_nzinfo );
g_sort_array=NULL;
}
#define MEDBLOCKSIZE 8 /* FIXME */
#define MAXBLOCKSIZE 16
static int rsb_do_partition(struct nzinfo * nnzpx,rsb_blk_idx_t * p_x,rsb_blk_idx_t *X_b, rsb_blk_idx_t maxk, int blocksize)
{
int k;
rsb_coo_idx_t last_i=0;
*X_b=0;
if( ! ( nnzpx[0].flags & BLOCK_START ) || nnzpx[0].i!=0 )
{
p_x[*X_b]=0;/* if not here, this will be performed in the next loop */
(*X_b)++;
}
for(k=0;k<maxk;++k)
{
if(
( nnzpx[k].flags & BLOCK_START) ||
( nnzpx[k].i-last_i >= blocksize) ||
( k>0 && k+1<maxk && nnzpx[k-1].n>nnzpx[k].n && /* local minumum */
nnzpx[k+1].n>nnzpx[k].n && nnzpx[k].i-last_i /* >= MEDBLOCKSIZE */ )
)
{
last_i=nnzpx[k].i;
p_x[*X_b]=last_i;
(*X_b)++;
RSB_DO_FLAG_ADD(nnzpx[k].flags,BLOCK_START); /* we mark a new block */
}
}
// p_x[*X_b]=0;
// for(k=0;k<*X_b;++k) p_x[k+1]=p_x[k+1]+p_x[k];
p_x[*X_b]=maxk;
return 0;
}
/*
* This implementation partitions a a matrix specified through its nonzero coordinates into a vbr partitioning
* */
int rsb__util_nnz2vbr(const rsb_coo_idx_t * IA, const rsb_coo_idx_t * JA, const rsb_nnz_idx_t nnz, const rsb_blk_idx_t rows, const rsb_blk_idx_t columns, rsb_blk_idx_t **p_rp, rsb_blk_idx_t **p_cp, rsb_blk_idx_t *M_b, rsb_blk_idx_t *K_b, int blockrowsize, int blockcolumnsize)
{
/**
FIXME : UNTESTED
*/
/* Example driver program:
#include <stdlib.h>
#include <rsb_partition.h>
int main()
{
const int rows=10,columns=10;
const int IA[]={0,1,1,2,3,4,5,6,7,8,9};
const int JA[]={0,2,1,2,3,4,5,6,7,8,9};
const int NNZ=11;
int *p_rp;
int *p_cp;
return nnz2vbr(IA,JA,NNZ,rows,columns,&p_r,&p_c);
}
*/
struct nzinfo *nnzpc=NULL ,*nnzpr=NULL ;
rsb_coo_idx_t *nnzpc_s,*nnzpr_s;
int k;
rsb_blk_idx_t *p_r,*p_c;
if(!M_b||!K_b||!IA||!JA||nnz<1||rows<1||columns<1||!p_rp||!p_cp)return -1;
nnzpr=calloc(rows ,sizeof(struct nzinfo));
nnzpc=calloc(columns,sizeof(struct nzinfo));
nnzpr_s=calloc(rows ,sizeof(rsb_coo_idx_t));
nnzpc_s=calloc(columns,sizeof(rsb_coo_idx_t));
p_r=calloc(1+rows,sizeof(rsb_coo_idx_t));
p_c=calloc(1+columns,sizeof(rsb_coo_idx_t));
/* FIXME */
if(!nnzpr_s)goto err;
if(!nnzpc_s)goto err;
if(!nnzpr)goto err;
if(!nnzpc)goto err;
// if(!p_r)goto err;
// if(!p_c)goto err;
/* check */
for(k=0;k<nnz;++k) if(IA[k]>=rows )goto err;
for(k=0;k<nnz;++k) if(JA[k]>=columns)goto err;
for(k=0;k<nnz;++k) if(IA[k]< 0 )goto err;
for(k=0;k<nnz;++k) if(JA[k]< 0 )goto err;
/* we count the nonzeros on each column and on each row */
for(k=0;k<nnz;++k) nnzpr[IA[k]].i=IA[k], nnzpc[JA[k]].i=JA[k];
for(k=0;k<nnz;++k) nnzpr[IA[k]].n++, nnzpc[JA[k]].n++;
for(k=0;k<rows ;++k) nnzpr_s[k]=k;
for(k=0;k<columns;++k) nnzpc_s[k]=k;
/* we sort the index arrays on the basis of the count value */
rsb_qsort_nzinfo(nnzpr, nnzpc, nnzpr_s, nnzpc_s, rows, columns);
// for(k=0;k<columns;++k) RSB_STDERR("(%d -> %d)\n", nnzpc[nnzpc_s[k]].i, nnzpc[nnzpc_s[k]].n) ; RSB_STDERR("---\n");
// for(k=0;k<rows ;++k) RSB_STDERR("(%d -> %d)\n", nnzpr[nnzpr_s[k]].i, nnzpr[nnzpr_s[k]].n) ; RSB_STDERR("---\n");
// for(k=0;k<columns;++k) RSB_STDERR("%d ", nnzpc[nnzpc_s[k]].n) ; RSB_STDERR("\n");
// for(k=0;k<rows ;++k) RSB_STDERR("%d ", nnzpr[nnzpr_s[k]].n) ; RSB_STDERR("\n");
// RSB_STDERR("c=[0"); for(k=0;k<columns;++k) RSB_STDERR(",%d", nnzpc[k].n) ; RSB_STDERR("];\n");
// RSB_STDERR("r=[0"); for(k=0;k<rows ;++k) RSB_STDERR(",%d", nnzpr[k].n) ; RSB_STDERR("];\n");
/* now we determine blocks dimensions, using least populated columns/rows as split points */
/* first heuristic : partition tightly, then expand */
for(k=0;k<rows ;++k) p_r[k]=k;
for(k=0;k<columns;++k) p_c[k]=k;
/* we sorted the arrays with per-column and per-row nnz counts */
/* we start with a minimal partitioning (bogus) */
*M_b= (rows / ( MAXBLOCKSIZE/4 ));
*K_b= (columns / ( MAXBLOCKSIZE/4 ));
/* we use the minimal column and row indices as first block starting indices */
for(k=0;k<*M_b;++k) { RSB_DO_FLAG_ADD(nnzpr[nnzpr_s[k]].flags,BLOCK_START); }
for(k=0;k<*K_b;++k) { RSB_DO_FLAG_ADD(nnzpc[nnzpc_s[k]].flags,BLOCK_START); }
// for(k=0;k<*M_b;++k) RSB_STDERR("break at %d\n",nnzpr[nnzpr_s[k]].i);
/*
* we create (right now, with no furhter strategy, but we would like to use local minimality criteria)
* intermediate blocks of average size
* */
if(blockrowsize <1)blockrowsize =MEDBLOCKSIZE;/* FIXME */
if(blockcolumnsize<1)blockcolumnsize=MEDBLOCKSIZE;/* FIXME */
*M_b=0;
*K_b=0;
rsb_do_partition(nnzpr,p_r,M_b,rows ,blockrowsize);
rsb_do_partition(nnzpc,p_c,K_b,columns,blockcolumnsize);
// RSB_STDERR("M_b:%d\n",*M_b);
// RSB_STDERR("K_b:%d\n",*K_b);
// for(k=0;k<*K_b;++k) p_c[k]=p_c[k+1]-p_c[k];
// for(k=0;k<*M_b;++k) p_r[k]=p_r[k+1]-p_r[k];
// for(k=0;k<M_b ;++k) RSB_STDERR(" %d ", p_r[k]);RSB_STDERR("\n");
// for(k=0;k<K_b ;++k) RSB_STDERR(" %d ", p_c[k]);RSB_STDERR("\n");
if(nnzpr_s) free(nnzpr_s);
if(nnzpc_s) free(nnzpc_s);
if(nnzpr) free(nnzpr);
if(nnzpc) free(nnzpc);
// if(p_r) free(p_r);
// if(p_c) free(p_c);
/* FIXME : MISSING REALLOC FOR P_R, P_C ! */
*p_rp=p_r,
*p_cp=p_c;
/* FIXME : FREE MEMORY ! */
return 0;
err:
if(nnzpr_s) free(nnzpr_s);
if(nnzpc_s) free(nnzpc_s);
if(nnzpr) free(nnzpr);
if(nnzpc) free(nnzpc);
// if(p_r) free(p_r);
// if(p_c) free(p_c);
/* FIXME : FREE MEMORY ! */
return -1;
}
#endif
rsb_bool_t rsb__should_rejoin_small_leaf(rsb_nnz_idx_t nnz, rsb_nnz_idx_t mk, rsb_nnz_idx_t uk, rsb_nnz_idx_t lk, rsb_type_t typecode)
{
/**
*
*/
return
(
(( nnz-lk>0 && nnz-lk < ((rsb_global_session_handle.min_leaf_matrix_bytes)/RSB_SIZEOF(typecode))) ||
( lk-mk>0 && lk-mk < ((rsb_global_session_handle.min_leaf_matrix_bytes)/RSB_SIZEOF(typecode))) ||
( mk-uk>0 && mk-uk < ((rsb_global_session_handle.min_leaf_matrix_bytes)/RSB_SIZEOF(typecode))) ||
( uk>0 && uk < ((rsb_global_session_handle.min_leaf_matrix_bytes)/RSB_SIZEOF(typecode))))
&&
(( nnz-lk>0 && nnz-lk > ((rsb_global_session_handle.avg_leaf_matrix_bytes)/RSB_SIZEOF(typecode))) ||
( lk-mk>0 && lk-mk > ((rsb_global_session_handle.avg_leaf_matrix_bytes)/RSB_SIZEOF(typecode))) ||
( mk-uk>0 && mk-uk > ((rsb_global_session_handle.avg_leaf_matrix_bytes)/RSB_SIZEOF(typecode))) ||
( uk>0 && uk > ((rsb_global_session_handle.avg_leaf_matrix_bytes)/RSB_SIZEOF(typecode))))
);
}
/* @endcond */
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