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List of user visible changes for each librsb release.
librsb Version 1.3.0.2 (20221220), changes:
- Internals:
* Now with './configure --enable-debug' rsb_lib_init checks that OpenMP implementation is not a stub (e.g. in AOCC).
* If using Fortran, make rsb.mod's rsb.F90 part of -lrsb (for Cray Fortran 14).
* rsb_coo_sort: fix crash on nr==0 (now will silently accept).
- Compatibility:
* examples/fortran.F90: don't use implied do on a triangular index space, so it builds on flang-13, too.
* configure: guess clang flags for Cray version of clang.
* configure: guess nvc OpenMP flags.
* make qtests: increase tests numerical tolerances when using Cray compiler.
* Will build and perform tests on systems without setenv(), too (then using putenv() if possible).
* Honour the $(EXEEXT) suffix (e.g. in Windows)
- Misc minor
* fix a format error on long indices on 32-bit architectures
* Improve documentation of rsb_strerror_r().
librsb Version 1.3.0.1 (20220429), changes:
- API:
* RSB.F90: Functions accepting strings use 'CHARACTER(C_CHAR), DIMENSION(*)' instead of 'TYPE(C_PTR), VALUE'; so now one must pass C_NULL_CHAR instead of C_NULL_PTR.
* rsb.h: additional input checks in rsb_mtx_rndr().
* rsb.hpp: additional input checks in the C++ wrappers.
* librsb-config: add '--cxxflags' switch for most of the flags used for compiling the library.
- Portability:
* No unaligned memory access in 'rsbench --read-performance-record' (fix for armhf,sparc64 architectures).
* Avoid (unused) out-of-bounds memory read in rsb_spsv()/rsb_spsm().
* Build-time improvements for cross-compilation.
* Build-time improvements for MacOS, AIX, FreeBSD, OpenBSD, NetBSD.
* Build with compilers not supporting OpenMP, too.
* Build (cut-down) test programs even if certain system headers missing.
* Improved compatibility with shells other than 'bash'.
* Support "IBM XL" Fortran: if 'xlf' detected, use unmangled C symbols for Fortran.
- Test system:
* Fortified 'make qtests' and 'make itests' for various atypical configurations.
* Reduced duration of rsb_lib_init(): it was slowing down 'make qtests' under rsbtest/.
- Usage of the configure script:
* Add '--disable-c++-examples': do not build C++ example programs.
* Add '--disable-programs': build almost no test or example program.
* Disable all C++ components with './configure CXX=" "'.
* Add a check to determine if C++ linker inadequate to link Fortran programs (as observed on Intel OneAPI compilers icx/icpx/ifx). Override check by using '--enable-fortran-linker' or '--disable-fortran-linker'.
* Out-of-dir now transparent: does not require use of '--with-librsbpp', '--with-rsblib', '--with-rsbtest'.
* Can pass custom OPENMP_CFLAGS OPENMP_CXXFLAGS OPENMP_FCFLAGS
- Internals:
* More internal consistency checks.
* Fewer potential compile-time warnings.
- Misc:
* 'rsbench -I' will print out 'CXXFLAGS', too
librsb Version 1.3.0.0 (20220121), changes:
- Major changes:
* Considerably improved performance of rsb_spmm()/usmm() via new kernels (can be turned off at runtime by setting 'RSB_WANT_RSBPP=0' in the environment).
* Added a C++ API (classes RsbMatrix and RsbLib) in new header <rsb.hpp>.
* Enhanced test suite considerably (e.g. using Google Test, if detected), with a much higher coverage than in librsb-1.2.
* Added 'make itests' Makefile target: post-install tests.
* Environment variable 'RSB_NUM_THREADS' now used by default (implicit configure '--enable-rsb-num-threads').
* Revised error messages.
* Revised help messages.
* General source code cleanup, less dead code.
* Better documentation: more examples and snippets.
* New C++ API examples are in rsblib/examples/.
* Added a symmetric CSR-to-RSB with autotuning example to fortran_rsb_fi.F90.
* Fixed integer overflow situations with limit-large matrices.
* Improved parallelism of rsb_spmv()/rsb_spmm() a bit (no overly strict locking).
* Improved performance of rsb_spmv()/rsb_spmm() beta-scaling.
* Most of the helper scripts require the 'bash' shell: expect build problems if you don't have it.
* 'librsb-config': Added options: '--link', '--fclibs', '--fcflags'.
* Added './configure --enable-long-indices' option to use 64-bit indices (instead of 32-bit indices) (experimental)
- Minor changes, related to the API:
* rsb.h: Renamed function rsb_load_spblas_matrix_file_as_matrix_market() to rsb_blas_file_mtx_load().
* rsb.h: If passing RSB_FLAG_TRIANGULAR flags to rsb_mtx_alloc_from_coo_inplace() or rsb_mtx_alloc_from_coo_const(), upper or lower triangle will be determined. Similarly when using rsb_mtx_alloc_from_coo_begin() and rsb_mtx_alloc_from_coo_end(). BLAS property blas_triangular implies triangle auto-detection, too.
* rsb.h: Added RSB_TRANSPOSITION_INVALID: guaranteed invalid transposition char for transA (useful for initializations).
* rsb.h: Added rsb_coo_cleanup(), to compact duplicates.
* rsb.h: Added RSB_ERR_ELEMENT_NOT_FOUND error code for rsb_mtx_get_vals() and rsb_mtx_set_vals().
* If configured with '--enable-interface-error-verbosity=N' (with integer N>0), RSB_ERR_ELEMENT_NOT_FOUND won't be returned unnecessarily (is not properly an error).
* rsb.h: RSB_DIAGONAL flag changed value (now contains RSB_FLAG_TRIANGULAR).
* rsb.h: rsb_lib_get_opt(RSB_IO_WANT_EXECUTING_THREADS,..) will return number of working threads, even if not overridden.
* rsb.h: With more threads requested than supported, rsb_lib_init() will print a warning to stderr and continue with the supported number.
* rsb.h: rsb_lib_init(): Unless disabled, environment variable 'RSB_NUM_THREADS' overrides OMP_NUM_THREADS.
* rsb.h: It should be safe to call rsb_lib_exit() more than once.
* rsb.h: Symmetric-diagonal matrices accepted by rsb_spsv()/rsb_spsm().
* rsb.h: Added RSB_IO_WANT_VERBOSE_INIT option for to rsb_lib_init().
* rsb.h: RSB_IO_WANT_VERBOSE_INIT makes rsb_lib_reinit() verbose as well.
* rsb.h: rsb_mtx_add_to_dense() is now threaded.
* rsb.h: rsb_tune_spmm()/rsb_tune_spsm() with RSB_IO_WANT_VERBOSE_TUNING set to >2 allows to generate tuning trace plots.
* rsb.h: rsb_file_mtx_load(): Diagnostics less verbose by default.
* rsb.h: Added checks to rsb_mtx_alloc* functions to spot forgotten rsb_lib_init().
* rsb.h: rsb_mtx_rndr(): No hostname in EPS plot comments if environment has 'RSB_USE_HOSTNAME=0'.
* rsb.F90: Added INTERFACE to rsb_blas_file_mtx_load().
* rsb.h/blas_sparse.h: rsb_lib_exit() will free matrices created via the Sparse BLAS API.
* blas_sparse.h: Sparse BLAS interface functions have basic checks for uninitialized use of librsb.
* blas_sparse.h: Added BLAS properties blas_rsb_rep_hwi, blas_rsb_rep_rec (extensions).
* blas_sparse.h: BLAS interface autotuning max merges/splits count now same as in rsb_tune_spmm().
* Bugfix: rsb_strerror_r() now honors buflen parameter.
* Bugfix: can correctly read complex matrix as int (the real components).
* Bugfix: rsb_mtx_alloc_from_coo_begin() now accepts RSB_NUMERICAL_TYPE_INT as type code.
* Bugfix: rsb_spmsp() was crashing if result matrix has nnz<=rows.
- Minor changes, related to the configure script:
* Added GREP, SED, CUT as configure variables, to allow custom utilities.
* Default for '--with-max-threads' is now 128.
* Dropped dependency on <libgen.h>.
* Added hwloc-based cache detection (e.g. for cygwin).
* Added '--enable-internal-headers-install', which will define the RSB_HAVE_IHI symbol.
* Internals: './configure --debug-getenvs' activates reading "RSB_SPSV_OP_FLAG" environment variable to control rsb_spsv() internals.
* If clang compiler is detected, then add '-latomic' to LIBS.
* Added '--with-baselib-cflags' customization option.
* Added '--with-kernels-cflags' customization option.
* Now '--with-zlib' is on by default.
* Added '--with-mkl', so it will probe for <mkl/mkl.h> and GNU-linkables.
* './configure --with-mkl' probes the MKL_INCDIR environment variable unless '--with-mkl-incdir'.
* './configure --with-mkl --disable-openmp' probes for sequential MKL.
* './configure --enable-fortran-linker': Use Fortran link command for Fortran examples.
* './configure --enable-extra-patches' : Activate extra specific patches/workarounds for known compiler bugs (e.g. gcc-11 https://gcc.gnu.org/bugzilla/show_bug.cgi?id=103995); if available, will use 'spatch' from Coccinelle, otherwise awk.
* './configure --enable-debug' activates m4 debug comments.
- Minor changes, related to Makefile rules:
* Added 'make check' as alias of 'make qtests'.
* Added 'make realclean', mostly for distro maintainers to clean test artifacts.
* Added 'make sources' to build sources, e.g. from *.m4 and *.m.
* Now 'make distclean' will also perform 'cleanall' and 'realclean'.
* Kind-of-a-bug: out-of-dir builds convert *.m4 into *.c *.h in the distclean directory.
* Workaround (not solution) to a known Makefile.am bug with 'make dist' when no Sparse BLAS requested, where Makefile will attempt creation of a sbtc.c and sbtf.F90..
- Minor changes, rsbench-related (these are rather maintainer-oriented, not user-oriented):
* Added option '--bench' (an alias for multiple options) for easier benchmarking.
* Default threads will be limited to that of '--with-max-threads=<...>' value.
* Added options '--want-memory-benchmark' / '--want-no-memory-benchmark', and memory benchmark will not be anymore default on, but will be still implied by --bench.
* Added '--less-verbose' as counterpart to '--verbose'.
* Added option '--sort-filenames-list' (by default on) and '--no-sort-filenames-list'.
* Option '--read-performance-record' can be prepended by --setenv var=val.
* Dir/file name in .rpr file, when specified one only.
* MKL version name in .rpr file, when auto-chosen.
* 'rsbench --bench' prints per-category 'limited' benchmark results before total one.
* If using '--bench' comparing with the MKL, use the Intel MKL Inspector interface (experimental).
* When loading matrices through recursion a check will skip 'MatrixMarket matrix array' files.
* Directories will be traversed recursively by default when using e.g. '-oa -Ob ... <directory>' avoiding dups.
* Memory benchmark will be executed and saved within the .rpr file.
* Update to the *.rpr file format: now the environment will be also saved and displayed if environment has "RSB_PR_ENV=1".
* Internal values for RSB_CC, RSB_CFLAGS, RSB_DETECTED_MEM_HIERARCHY_INFO, and RSB_IO_WANT_MEMORY_HIERARCHY_INFO_STRING will be artificially added using setenv() to the environment so the .rpr file may have them.
* Added '... -oa -Ob --setenv var=val' / '--unsetenv val'.
* Now diagonally filled non-square matrices can be generated, e.g. '--gen-diag 3x40'.
* Restored a long forgotten test ('-Or').
* Added option '--implicit-diagonal'.
* Added option '--no-compare-competitors' to turn off MKL at run time.
* Emit error message when failing on a path.
* K,M,G argument suffixes (case insensitive), e.g. './rsbench -g -c 1k -r 2k -l -b1'.
* Accepts alpha/beta values lists: 'rsbench --alpha -1,1,2 --beta 0,1,2'.
* 'rsbench --alpha : --beta :' is shorthand for a mix of values.
* Added option '--inc <stride>' which will propagate arg to '--incx <stride> --incy <stride>'.
* Options '--inc', '--incx', '--incy' accept ':' for default values.
* Stricter error checking in 'rsbench -B'.
* Added option '--also-implicit-diagonal'.
* Added option '--as-hermitian'.
* Added option '--also-symmetries'.
* Added '--all-blas-types' option, for all implemented BLAS types.
* 'rsbench --matrix-print' now just as '-P'.
* Added option '--bench ... --write-performance-record=pfx' : it sets matrix rendering file prefix.
* Added option 'bench ... --chdir <directory-with-matrices>'.
* Added option '--matrix-sample-pcnt' to sample read matrices' nonzeroes.
* Added option '--nmb' as short for '--want-no-memory-benchmark'.
* Added option '--mkl-no-inspector': will use deprecated Intel MKL Sparse BLAS.
* Inspector-executor SpBLAS API is now default when comparing to Intel MKL.
* Added option '--no-submatrix-format-labels' to 'rsbench --plot-matrix'.
* Added option '--latex' to 'rsbench --plot-matrix'.
* Added option '--no-transpose' as alias to '--notranspose'.
* Added option '--expand-symmetry' to rsbench: expand symmetry and remove flags.
* Appending 'L' in e.g. './rsbench -Q10QL' suppresses limits tests.
* After loading a matrix file, rsbench sets its values to ones ('--want-no-ones-fill option' to counter that).
* Option '--matrix-ls' now called '--matrix-ls-latex'.
* Option '--matrix-ls' now prints plain text.
* Sped up 'rsbench -M'.
* Fix to 'rsbench --plot-matrix --nonzeros-dump': will draw dots after blocks.
* Fix: '-M' was requesting wrong alignment from posix_memalign.
librsb Version 1.2.0.11 (20211216) changes, most critical first:
* fix previously broken no-fortran build (./configure FC=' ') and minor configure fixes
* fix rsb_mtx_free: was not always returning NULL
* small fixes to examples/autotune.c & internals
* rsb_mtx_alloc_from_csr_const: avoid potential leak on internal error
* code generator updated to work with GNU Octave 6.2.0
* internals: fix broken rsb_spmm/rsb_spsm if unsupported RSB_IO_WANT_LEAF_LEVEL_MULTIVEC off
* internals (--limits-testing): avoid overflows in near-limit-long OpenMP loop with gcc
librsb Version 1.2.0.10 (20210916) changes, most critical first:
- bugfix: rsb_spmm(...,RSB_FLAG_WANT_ROW_MAJOR_ORDER,...) internals swapped ldB and ldC
so having ldB > ldC could lead to a crash; with ldC < ldB, to wrong results
- bugfix: rsb_spmm(...,RSB_FLAG_WANT_ROW_MAJOR_ORDER,...) on matrix with
RSB_FLAG_UNIT_DIAG_IMPLICIT could compute wrong results
- bugfix: rsb_tune_spmm()/rsb_tune_spsm() could crash if called with
order==RSB_FLAG_WANT_ROW_MAJOR_ORDER and auto leading dimensions and implicit
operands (ldB==0 and Bp==NULL, ldC==0 and Cp==NULL)
- bugfix: rsb_mtx_get_rows_sparse() with: was ignoring RSB_TRANSPOSITION_C
- fix: rsb_file_mtx_load() was not setting RSB_FLAG_HERMITIAN flag
- fix: rsb_file_mtx_load()..rsb_tune_spmm() could leak memory of tiny matrices
- fix: calling rsb_mtx_free() before rsb_mtx_alloc_from_coo_end() won't leak now
- fix: rsb_tune_spmm() was crashing on tnp == NULL
- fix: rsb_mtx_clone()..rsb_tune_spmm() could leak memory of tiny matrices
- fix: rsb_tune_spmm()/rsb_tune_spsm() will accept RSB_FLAG_WANT_ROW_MAJOR_ORDER on any nrhs
- fix: rsb_lib_exit() was not clearing all flags
- fix: avoid rsb_lib_exit() reporting non-existent memory leaks when using e.g.
rsb_mtx_switch_to_coo() and configured with --enable-allocator-wrapper
- fix: small adjustments in examples/*.c
- fix: avoid descriptor memory leak in gzipped matrix input
- fix: rsb_file_mtx_rndr() don't crash on empty matrices
- fix: symmetric upper triangle now read by rsb_load_spblas_matrix_file_as_matrix_market()
- fix: rsb_mtx_rndr() won't crash but return error on mtxAp==NULL
- fix: rsb_file_mtx_load() will set return code on non-existing file
- fix: rsb_spmm() will now gracefully accept alphap=NULL, betap=NULL
- fix: rsb_mtx_rndr() won't crash on tiny matrices
- fix: use-after-free in rsbench -Q and -K; fixes to -P and -g
- fix: in-line code documentation snips of rsb_mtx_get_coo_block() and rsb_tune_spmm()
- fix: documentation of rsb_mtx_clone() (used doxygen 1.8.20)
- fix: on wrong input A, BLAS_dusmm() BLAS_dusmv() won't crash but return error
- fix: examples/autotune.c was not calling rsb_lib_exit()
- fix: small Doxygen-generated documentation fix
- fix: no implied RSB_USE_ASSERT=1 in --enable-debug-getenvs
- fix: rsb_types.h now defines RSB_LIBRSB_VER_DATE
- fix to rsbench --want-no-autotune: it was not being effective
- fix of crash-prone sorting bug affecting rsbench on large matrices (in 1.2.0.9)
- fix typo in documentation of rsb_mtx_alloc_from_coo_inplace()
- fix possible crash (and wrong results) in rsb_mtx_get_rows_sparse() with
RSB_FLAG_FORTRAN_INDICES_INTERFACE
- fix: on rsb_mtx_get_info(mtxAp,RSB_MIF_INDEX_STORAGE_IN_BYTES_PER_NNZ__TO__RSB_REAL_T,&bpnz)
when nnz==0: set bpnz=2*sizeof(rsb_coo_idx_t) instead of nan
- tiny fix to --verbose --verbose output (plot time reporting)
- tiny performance fix in rsb_tune_spmm/rsb_tune_spsm
- developer configure_for_debug.sh script: enable zlib and doc building
- if configure --enable-doc-build, `make devtests` implies Doxygen HTML check
- rsb_mtx_get_vec(): tolerate NULL output argument only if matrix empty
- improve Doxygen-generated documentation of rsb_types.h
- if RSB_WANT_NO_RSB_TYPES_H defined, rsb.h won't include other RSB headers
- compilation fixes (-Werror=switch)
- added rsbench --nrhs-by-rows (aka --by-rows) to use RSB_FLAG_WANT_ROW_MAJOR_ORDER
- added rsbench --by-columns / --nrhs-by-columns to use RSB_FLAG_WANT_COLUMN_MAJOR_ORDER
- rsb_file_mtx_get_dims() won't add RSB_FLAG_LOWER/RSB_FLAG_UPPER flags
- default for --with-max-threads is now 160
- reduce librsb.so size by hiding unnecessary symbols
- further internal fixes (renames of internal symbols, RSB_HEADER_VERSION_STRING, etc.)
- rsb_spsv() now requires either lower or upper triangle
- rsbench: echo a selection of SLURM_* environment variables
- scripts/build_optimized.sh's default now is -Ofast
- tuning with blas_rsb_autotune_next_operation(): a bit faster defaults
- rsb_tune_spmm()/rsb_tune_spsm(): faster performance sampling if maxt>=0
- rsb_tune_spmm()/rsb_tune_spsm(): won't iterate till limit but stop on excessive slowdown
- rsbench -C is more resilient: will continue on failed rsb_lib_init and report error.
- several documentation-related improvements
librsb Version 1.2.0.9 (20200806), changes:
- minor Makefile / configure fixes
- minor script compatibility fixes
- hwloc2 compatibility patch from Samuel Thibault
- fixed missing input validation in rsb_file_mtx_rndr()
- small fixes in internal debugging features
- small fixes in rsbench
- fix: rsb_mtx_rndr(..RSB_MARF_EPS) and rsb_file_mtx_rndr(..RSB_MARF_EPS):
could crash on uniform-values matrix input.
- fix: BLAS_ussp() of RSB extension properties now effective
- fix: rsb_mtx_get_vec(... , ... , RSB_EXTF_SUMS_ROW)) and
rsb_mtx_get_vec(... , ... , RSB_EXTF_SUMS_COL)) were missing a
recursive implementation, and crashing (segmentation fault).
- fix: rsb_spmsp was crashing if result matrix has nnz<=rows
- fix: BLAS_zusaxpy and BLAS_cusaxpy in C were crashing (segmentation fault)
- fix: rsb_sppsp() was ignoring transB and could crash on transA
- fix: rsbench ... --reverse-alternate-rows could have differed in pattern
- bugfix: duplicate or unit-diagonal or zero elements cleansing code could
crash if built with icc
- bugfix: zeroes/duplicates/triangle cleansing code
- bugfix: avoid possible crash after subsequent rsb_tune_spmm/rsb_tune_spsm
- bugfix: avoid possible crash with non-default RSB_IO_WANT_SORT_METHOD
- fix: possible malfunctioning of rsb_tune_spmm/rsb_tune_spsm with icc
- fix: possible malfunctioning of rsb_coo_sort if non-default RSB_IO_WANT_SORT_METHOD
- fix: rsb_sppsp and rsb_spmsp were producing CSR matrices (no RSB, thus losing parallelism)
- small messages fix when RSB_PR_MULTIDUMP=...
- bugfix: rsb_sppsp result was of first operand matrix type, not target
- rsb_spmm: if RSB_FLAG_WANT_COLUMN_MAJOR_ORDER, then ldC==0, ldB==0 sets 'compact' defaults,
that is no extra stride between the columns.
- bugfix rsb_spmv/rsb_spmm: if called with lhs-zeroing (beta==0) and transA==RSB_TRANSPOSITION_C
on tiny (single submatrix) non-square matrices, off-boundaries zeroing could occur,
and/or result vector would not be zeroed.
- bugfix rsb_spmv/rsb_spmm: using non-square matrices with RSB_FLAG_UNIT_DIAG_IMPLICIT,
off-boundaries writes may occur, with wrong results.
- configure increases max supported threads via `nproc` (override with e.g. --with-max-threads=10)
- fix: usmm,ussm now accept (:,:)-shaped b,c parameters.
Note: it still differs from the "Fortran 95 binding" in the BLAST Standard specification.
- miscellaneous out-of-dir and build files fixes
librsb Version 1.2.0.8 (20190718), changes:
- configure default OpenMP flag for icc is now -fopenmp
- shall work with upcoming hwloc-2 (http://github.com/open-mpi/hwloc.git)
- fix: sbtc would miss count of certain test failures.
- bugfix: rsb_spmv/rsb_spmm/BLAS_cusmv/BLAS_zusmv/BLAS_cusmm/BLAS_zusmm could compute
wrong values in transpose or conjugated transpose on very sparse complex hermitian
matrices
- misc configure/Makefile related
- if configure fails detecting cache size, use fallback value
librsb Version 1.2.0-rc7 (20170604), changes:
- bugfix: rsb_spmv/rsb_spmm/BLAS_cusmv/BLAS_zusmv/BLAS_cusmm/BLAS_zusmm could compute wrong values on complex hermitian matrices if rhs imaginary part non null.
- bugfix: complex conjugated transpose rsb_spsv/rsb_spsm/BLAS_cussv/BLAS_zussv/BLAS_cussm/BLAS_zussm could compute wrong values if rhs imaginary part non null.
- bugfix: rsb_sppsp/rsb_mtx_clone would compute scaled conjugate of complex matrices wrong if alpha imaginary part non null.
- might detect a forgotten rsb_lib_init() at first matrix allocation and return an error.
librsb Version 1.2.0-rc6 (20170324), changes:
- BLAS_zusget_element & co will behave one-based in Fortran.
- bugfix: rsb_sppsp was summing incorrectly certain non-overlapping sparse matrices.
- examples/make.sh will build or not build fortran examples according to configuration.
- fix: man pages for rsbench and librsb-config go in man section 1, not 3.
- fix to diagnostic printout in benchmark mode.
- minor code generation warning fix.
- rsb_file_mtx_save and rsb_file_vec_save output use full precision.
librsb Version 1.2.0-rc5 (20160902), changes:
- Fixed EPS rendering of matrices, e.g.:
"./rsbench --plot-matrix -aRzd -f matrix.mtx > matrix.eps"
- Will detect MINGW environment via the __MINGW32__ symbol and add
-D__USE_MINGW_ANSI_STDIO=1 to circumvent its C99 incompatibilities.
- fix: previously, code was broken in case of lack of all of
--enable-allocator-wrapper, posix_memalign() and memalign();
now malloc() will be used instead.
- fix: memory hierarchy info string set via --with-memhinfo used to be
ignored by an eventual auto-detected value, wrongly.
librsb Version 1.2.0-rc4 (20160805), changes:
- librsb-config will print a space between each emitted item and
explicitly the static library file path on --static
- fix: rsbench -M was requesting wrong alignment from posix_memalign
- internally using libtool for everything:
- obsoleted the --enable-shlib-linked-examples option; now on please use
--disable-shared / --enable-shared, --disable-static / --enable-static
to avoid the defaults.
- librsb-config new options: --cc --fc --cxx to get the librsb compilers
- internally using memset instead of bzero (deprecated since POSIX.2004).
- fix: example examples/fortran_rsb_fi.F90 had two consecutive rsb_lib_exit.
- fix: binary I/O (-b/-w) test in test.sh used to ignore missing XDR support.
librsb Version 1.2.0-rc3 (20160505), changes:
- Extension: if parameter flagsA of mtx_set_vals() has RSB_FLAG_DUPLICATES_SUM
then values will be summed up into the matrix.
- Bugfix: rsb_mtx_get_nrm on symmetric matrices was buggy.
- Bugfix: rsb_spsm potentially wrong in --enable-openmp and (nrhs>1).
(ussm affected)
- Bugfix: rsb_spsm wrong in --disable-openmp version and (nrhs>1).
(ussm affected)
- Bugfix: rsb_spsm used to scale only first rhs when (*alphap!=1 and nrhs>1).
(ussm affected)
- Bugfix: rsb_spsm used to solve only first rhs when (y != x).
(ussm not affected)
- Bugfix: rsb_spmm used to scale only first rhs when (*betap!=1 and nrhs>1).
(usmm not affected)
- Bugfix: rsb_tune_spmm/rsb_tune_spsm returned (false positive) error on
( mtxAp != NULL && mtxOpp != NULL ) rather than on
( mtxAp != NULL && mtxOpp != NULL && *mtxOpp != NULL ).
- Will use memset() on systems with no bzero() (e.g. mingw).
librsb Version 1.2.0-rc2 (20151025), changes:
- Bugfix: rsb_mtx_add_to_dense was using submatrix CSR arrays as they were
COO, thus producing wrong output.
- Bugfix: error message for RSB_ERR_NO_STREAM_OUTPUT_CONFIGURED_OUT was wrong.
- Bugfix: printout of sysconf()-detected L4 cache information.
- Bugfix: fixed broken build when sysconf() missing.
- Experimental --with-hwloc switch, recommended on cygwin.
- Bugfix: fixed broken build and qtests when using separate build, src dirs.
librsb Version 1.2.0, changes:
- general improvements:
* NUMA-aware tuning and allocations
* more documentation comments in rsb.F90
* better performance of rsb_spsm when nrhs>1
* faster rsb-to-sorted-coo conversion in rsb_mtx_switch_to_coo
* enabled out-of-tree builds (e.g. one distclean dir and many build dirs)
* new autotuning mechanisms behind rsb_tune_spmm/rsb_tune_spsm
* fewer compile time warnings from automatically generated code, e.g. in
rsb_krnl.c and rsb_libspblas.c
- programming interface (API) changes:
* bugfix w.r.t. 1.1: usmm()/ussm() were not declared in rsb_blas_sparse.F90
* introduced extension BLAS property blas_rsb_autotune_next_operation
to trigger auto tuning at the next usmv/usmm call
* eliminated RSB_FLAG_RECURSIVE_DOUBLE_DETECTED_CACHE and
RSB_FLAG_RECURSIVE_HALF_DETECTED_CACHE
* rsb_load_spblas_matrix_file_as_matrix_market() now takes a
typecode argument. Sets either blas_upper_triangular,
blas_lower_triangular, blas_upper_hermitian, blas_lower_hermitian,
blas_upper_symmetric or blas_lower_symmetric property according to
the loaded file.
* properly using INTEGER(C_SIGNED_CHAR) for 'typecode' arguments in rsb.F90.
* rsb.F90 change: all interfaces to functions taking INTEGER arrays now
require them to be declared as TARGET and passed as pointer
(via C_LOC()), just as e.g. VA.
* introduced the RSB_MARF_EPS_L flag for rendering Encapsulated PostScript
(EPS) matrices (with rsb_mtx_rndr()) and having a label included
- functionality changes:
* if called after uscr_end, uscr_insert_entries (and similar) will either
add/overwrite, according to whether the blas_rsb_duplicates_ovw or
blas_rsb_duplicates_sum property has been set just after uscr_end;
default is blas_rsb_duplicates_ovw.
* if configured without memory wrapper, requests for
RSB_IO_WANT_MEM_ALLOC_TOT and RSB_IO_WANT_MEM_ALLOC_CNT will
also give an error
* now rsb_file_mtx_load will load Matrix Market files having nnz=0
- bug fixes:
* non-square sparse-sparse matrices multiply (rsb_spmsp) and sum
(rsb_sppsp) had wrong conformance check and potential off-limits
writes
* usmm() used to have beta=0 as default; changed this to be 1 according to
the Sparse BLAS standard
* rsb_mtx_clone(): alphap now uses source matrix typecode
* rsb_util_sort_row_major_bucket_based_parallel() bugfix
* RSB_IO_WANT_VERBOSE_TUNING used to depend on RSB_WANT_ALLOCATOR_LIMITS.
- rsbench (librsb benchmarking program (internals)) changes:
* --incx and --incy now accept lists of integers; e.g. "1" or "1,2,4"
* rsb_mtx_get_rows_sparse() was not handling RSB_TRANSPOSITION_C and
RSB_TRANSPOSITION_T correctly until 1.1-rc2. Fixed now.
* added --only-upper-triangle
* if unspecified, default --alpha and beta now are set to 1.0
* when using --incx and --incy with list arguments, with
--one-nonunit-incx-incy-nrhs-per-type rsbench will skip benchmarking
combinations with both incX and incY > 1
* --also-transpose will skip transposed multiply of symmetric matrices
* --no-want-ancillary-execs is now default
* in an auto-tuning scan --impatient will print partial performance results
and update the performance results frequently.
* small fix in ancillary (--want-ancillary-execs) time measurements
* --types is a new alias for --type, and 'all' for ':' (all configured types)
* will tolerate non-existing or unreadable matrix files by just skipping them
* --reuse-io-arrays is now default (see --no-reuse-io-arrays to disable this)
and will avoid repeated file loading for the same matrix.
* --want-mkl-autotune 0/1 will disable/enable MKL autotuning in addition to
the RSB autotuning experiment.
* added:
--skip-loading-if-matching-regex
--skip-loading-symmetric-matrices
--skip-loading-unsymmetric-matrices
--skip-loading-hermitian-matrices
--skip-loading-not-unsymmetric-matrices
--skip-loading-if-more-nnz-matrices
--skip-loading-if-less-nnz-matrices
--skip-loading-if-more-filesize-kb-matrices
--skip-loading-if-matching-regex and --skip-loading-if-matching-substr
* if -n <threads> unspecified, will use omp_get_max_threads()
to determine the threads count.
* will terminate gracefully after SIGINT (CTRL-c from the keyboard)
* producing performance record files with
--write-performance-record <file>
( '' will ask for an automatically generated file name)
* reading back performance record files with --read-performance-record
* writing no performance record file with --write-no-performance-record
* --max-runtime will make the program terminate gracefully after a specified
maximal amount of time
* rsbench: LaTeX output of performance records; see options
--write-performance-record and --read-performance-record
* --out-res to--out-lhs and --dump-n-res-elements to --dump-n-lhs-elements
* --want-no-autotune
* expanded examples
* ...
librsb Version 1.1.0-rc4 (20170604)
- bugfix: rsb_spmv/rsb_spmm/BLAS_cusmv/BLAS_zusmv/BLAS_cusmm/BLAS_zusmm could compute wrong values on complex hermitian matrices if rhs imaginary part non null.
- bugfix: complex conjugated transpose rsb_spsv/rsb_spsm/BLAS_cussv/BLAS_zussv/BLAS_cussm/BLAS_zussm could compute wrong values if rhs imaginary part non null.
- bugfix: rsb_sppsp/rsb_mtx_clone would compute scaled conjugate of complex matrices wrong if alpha imaginary part non null.
- might detect a forgotten rsb_lib_init() at first matrix allocation and return an error.
- minor code generation warning fix.
- fix: rsbench -M was requesting wrong alignment from posix_memalign.
librsb Version 1.1.0-rc3 (20151025):
- bugfix: in parallel construction of very small matrices.
- bugfix: rsb_mtx_add_to_dense was using submatrix CSR arrays as they were COO, thus producing wrong output.
- fix: in examples/
- fix: of wrong printouts.
- fix: in Makefile and build.
librsb Version 1.1.0-rc2 (20150327):
Bugfix: fixed broken build when sysconf() missing.
Bugfix: non-square sparse-sparse matrices multiply (rsb_spmsp) and
sum (rsb_sppsp) had wrong conformance check and potential off-boundary
writes
Bugfix usmm: used to overwrite the result (beta=0) rather than accumulating (beta=1).
Bugfix to integer overflow which prevented termination of ./rsbench -M.
Bugfix related to thread control in a sorting routine.
Bugfix in the output of rsbench.
Preventing crashes when invoking autotuning routines with more threads than
maximal threads set at init time.
Documentation fixes for rsb_spmsp, rsb_spmsp_to_dense.
Preventing a crash with OpenMP disabled.
Fix to cope with user-activated OpenMP but no according flag detected by
configure (occurring with the Cray compiler).
Bug fix: the error constants in rsb.F90 were mistakenly negated.
Bug fix: rsb_mtx_get_rows_sparse did not handle RSB_TRANSPOSITION_C correctly.
librsb Version 1.1.0-rc1 (20140308):
Maintenance release with small fixes: a compiler bug workaround;
an innocent wrong function signature bug fix; minor bug fixes to the
rsbench program and the Sparse BLAS functionality;
fixed defect in Fortran example.
Fix in the configure related to ./configure --enable-matrix-ops=all : now
it will create correct code.
The rsb_load_spblas_matrix_file_as_matrix_market function has a type code
argument now.
Fix: RSB_IO_WANT_VERBOSE_TUNING used to depend on RSB_WANT_ALLOCATOR_LIMITS.
Small fix in ancillary (--want-ancillary-execs) time measurements.
Bugfix in parallel construction of very small matrices.
Bugfix: error message for RSB_ERR_NO_STREAM_OUTPUT_CONFIGURED_OUT was wrong.
Bugfix: printout of sysconf()-detected L4 cache information.
librsb Version 1.1.0, library changes:
* introduced rsb_tune_spmm: autotuning for rsb_spmv/rsb_spmm.
* introduced rsb_tune_spsm: autotuning for rsb_spsv/rsb_spsm.
* extensions for autotuning in the sparse blas interface:
blas_rsb_spmv_autotuning_on, blas_rsb_spmv_autotuning_off,
blas_rsb_spmv_n_autotuning_on, blas_rsb_spmv_n_autotuning_off,
blas_rsb_spmv_t_autotuning_on, blas_rsb_spmv_t_autotuning_off.
* RSB_IO_WANT_VERBOSE_TUNING option will enable verbose autotuning
* introduced rsb_file_vec_save
* configure option --enable-rsb-num-threads enables the user to specify
desired rsb_spmv/rsb_spmm threads count (if >0) via the RSB_NUM_THREADS
environment variable; even the value specified via
RSB_IO_WANT_EXECUTING_THREADS will be overridden.
* deprecated rsb_file_mtx_get_dimensions for rsb_file_mtx_get_dims.
* deprecated rsb_mtx_get_norm for rsb_mtx_get_nrm.
* deprecated rsb_mtx_upd_values for rsb_mtx_upd_vals.
* deprecated rsb_file_mtx_render for rsb_file_mtx_rndr.
* deprecated rsb_mtx_get_values for rsb_mtx_get_vals.
* deprecated rsb_mtx_set_values for rsb_mtx_set_vals.
* deprecated rsb_mtx_get_preconditioner for rsb_mtx_get_prec.
* introduced rsb_lib_set_opt and rsb_lib_get_opt as a replacement to
now deprecated RSB_REINIT_SINGLE_VALUE_C_IOP RSB_REINIT_SINGLE_VALUE
RSB_REINIT_SINGLE_VALUE_C_IOP, RSB_REINIT_SINGLE_VALUE_SET and
RSB_REINIT_SINGLE_VALUE_GET.
* introduced an ISO-C-BINDING interface to rsb.h (rsb.F03): consequently,
the --disable-fortran-interface configure option is now unnecessary, and
fortran programs can use rsb_lib_exit/rsb_lib_init instead of
rsb_lib_exit_np/rsb_lib_init_np.
* significantly improved documentation.
* --enable-librsb-stats configure option will enable collection of time
spent in librsb, together with RSB_IO_WANT_LIBRSB_ETIME .
* --enable-zero-division-checks-on-spsm renamed to
--enable-zero-division-checks-on-solve.
* rsb.mod will be optionally installed (separate from blas_sparse.mod).
* producing a librsb.pc file for the pkg-config system.
* improved performance of multi-vector multiplication
(leaf matrices will step once in each multi-vector).
* introduced rsb_mtx_rndr for rendering matrix structures to files.
* now using parallel scaling of output vector in Y <- beta Y + .. operations.
* extensions for handling duplicates in the sparse blas interface:
blas_rsb_duplicates_ovw, blas_rsb_duplicates_sum.
* introduced the RSB_MARF_EPS flag for rendering matrices as PostScript.
* introduced the RSB_CHAR_AS_TRANSPOSITION macro.
* introduced rsb_blas_get_mtx to enable rsb.h functions on blas_sparse.h
matrices.
* introduced Sparse BLAS extra properties for control/inquiry:
blas_rsb_rep_csr, blas_rsb_rep_coo, blas_rsb_rep_rsb.
* debug option to limit count and volume of memory allocations, with
RSB_IO_WANT_MAX_MEMORY_ALLOCATIONS and RSB_IO_WANT_MAX_MEMORY_ALLOCATED
(depending on --enable-allocator-wrapper).
* configure switch to select maximal threads count (--with-max-threads).
* <rsb-types.h> renamed to <rsb_types.h>.
* each librsb source file is prefixed by 'rsb' (less probability of object
file name clash in large applications).
* RSB_IO_* macros are now declared as enum rsb_opt_t.
* Doxygen will be only invoked to build documentation if configure switch
--enable-doc-build has been enabled.
* RSB_IO_WANT_EXTRA_VERBOSE_INTERFACE has been extended to Sparse BLAS
interface to librsb.
* Changes pertaining only the rsbench benchmark program:
* rsbench benchmarks data-footprint equivalent GEMV and GEMM.
* --read-as-binary/--write-as-binary options to rsbench (not yet in rsb.h).
* --discard-read-zeros option to rsbench (to add RSB_FLAG_DISCARD_ZEROS to
the matrix flags).
* --want-perf-counters option to rsbench (tested with PAPI 5.3; will enable
additional rsb-originating performance counter statistics to be dumped).
* zero-dimensioned matrices are allowed.
* changed row pointers parameter of rsb_mtx_alloc_from_csr_inplace to
rsb_nnz_idx_t*.
* PostScript (RSB_MARF_EPS, RSB_MARF_EPS_S, RSB_MARF_EPS_B) dump with
rsb_mtx_rndr are more compact now
* to enable or disable openmp, use either --enable-openmp or --disable-openmp
librsb Version 1.0.0-rc9 (20170604)
Bug fix: rsb_spmv/rsb_spmm/BLAS_cusmv/BLAS_zusmv/BLAS_cusmm/BLAS_zusmm could compute wrong values on complex hermitian matrices if rhs imaginary part non null.
Bug fix: complex conjugated transpose rsb_spsv/rsb_spsm/BLAS_cussv/BLAS_zussv/BLAS_cussm/BLAS_zussm could compute wrong values if rhs imaginary part non null.
Bug fix: rsb_sppsp/rsb_mtx_clone would compute scaled conjugate of complex matrices wrong if alpha imaginary part non null.
Fix: rsbench -M was requesting wrong alignment from posix_memalign.
Fix: Minor code generation warning fix.
librsb Version 1.0.0-rc8 (20151025)
Bug fix: rsb_mtx_add_to_dense was using submatrix CSR arrays as they were COO, thus producing wrong output.
Bug fix: fixed broken build when sysconf() missing.
Bug fix: printout of sysconf()-detected L4 cache information.
Bug fix: error message for RSB_ERR_NO_STREAM_OUTPUT_CONFIGURED_OUT was wrong.
Bug fix to integer overflow which prevented termination of ./rsbench -M.
Documentation fixes for rsb_spmsp, rsb_spmsp_to_dense.
Bug fix: the error constants in rsb.fi were mistakenly negated.
Bug fix: rsb_mtx_get_rows_sparse did not handle RSB_TRANSPOSITION_C correctly.
The rsb_load_spblas_matrix_file_as_matrix_market function has a type code argument now.
librsb Version 1.0.0-rc7 (20140308)
Maintenance release with small fixes: a compiler bug workaround; an innocent wrong function signature bug fix; using REAL(KIND(1.e0)) instead of REAL*4; minor bug fixes to the rsbench program and the Sparse BLAS functionality.
librsb Version 1.0.0-rc6
This release fixes the broken build when attempting configure/make with no Fortran compiler available.
librsb Version 1.0.0-rc5
Fifth release candidate for librsb-1.0.0. It fixes minor build/configure issues, solves minor testing bugs, and introduces major fixes to the experimental Fortran ISO C binding interface file (rsb.fi, now almost equivalent to rsb.h). It also updates the Fortran example program regarding the usage of librsb with the ISO C binding interface.
librsb Version 1.0.0-rc4
Configure / Makefile fixes.
librsb Version 1.0.0-rc3
Configure / Makefile fixes.
librsb Version 1.0.0-rc2
Configure / Makefile fixes.
librsb Version 1.0.0-rc1
Configure / Makefile fixes.
librsb Version 1.0.0-rc0
Configure / Makefile fixes.
librsb Version 1.0.0
* first public release
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