File: FormulaGraphvizFormatter.h

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/**
 * \file    FormulaGraphvizFormatter.h
 * \brief   Formats an AST formula tree as a dot directed graph
 * \author  Sarah Keating
 *
 * <!--------------------------------------------------------------------------
 * This sample program is distributed under a different license than the rest
 * of libSBML.  This program uses the open-source MIT license, as follows:
 *
 * Copyright (c) 2013-2018 by the California Institute of Technology
 * (California, USA), the European Bioinformatics Institute (EMBL-EBI, UK)
 * and the University of Heidelberg (Germany), with support from the National
 * Institutes of Health (USA) under grant R01GM070923.  All rights reserved.
 *
 * Permission is hereby granted, free of charge, to any person obtaining a
 * copy of this software and associated documentation files (the "Software"),
 * to deal in the Software without restriction, including without limitation
 * the rights to use, copy, modify, merge, publish, distribute, sublicense,
 * and/or sell copies of the Software, and to permit persons to whom the
 * Software is furnished to do so, subject to the following conditions:
 *
 * The above copyright notice and this permission notice shall be included in
 * all copies or substantial portions of the Software.
 *
 * THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
 * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
 * FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL
 * THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
 * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
 * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER
 * DEALINGS IN THE SOFTWARE.
 *
 * Neither the name of the California Institute of Technology (Caltech), nor
 * of the European Bioinformatics Institute (EMBL-EBI), nor of the University
 * of Heidelberg, nor the names of any contributors, may be used to endorse
 * or promote products derived from this software without specific prior
 * written permission.
 * ------------------------------------------------------------------------ -->
 */

#ifndef FormulaGraphvizFormatter_h
#define FormulaGraphvizFormatter_h

#include "sbml/common/extern.h"
#include "sbml/util/StringBuffer.h"
#include "sbml/math/ASTNode.h"



BEGIN_C_DECLS


/**
 * @return the given formula AST as a directed graph.  The caller
 * owns the returned string and is responsible for freeing it.
 */
char *
SBML_formulaToDot (const ASTNode_t *tree);


#ifndef SWIG


/**
 * @return true (non-zero) if the given ASTNode is to formatted as a
 * function.
 */
int
FormulaGraphvizFormatter_isFunction (const ASTNode_t *node);


/**
 * Formats the given ASTNode as a directed graph token and returns the result as
 * a string.
 */
char *
FormulaGraphvizFormatter_format (const ASTNode_t *node);

/**
 * Since graphviz will interpret identical names as referring to
 * the same node presentation-wise it is better if each function node
 * has a unique name.
 * 
 * Returns the name with the name of the first child
 * prepended
 *
 * THIS COULD BE DONE BETTER
 */
char *
FormulaGraphvizFormatter_getUniqueName (const ASTNode_t *node);

/**
 * Formats the given ASTNode as a directed graph function name and returns the
 * result as a string.
 */
char *
FormulaGraphvizFormatter_formatFunction (const ASTNode_t *node);

/**
 * Since graphviz will interpret identical names as referring to
 * the same node presentation-wise it is better if each function node
 * has a unique name.
 * 
 * Returns the name of the function with the name of the first child
 * prepended
 *
 * THIS COULD BE DONE BETTER
 */
char *
FormulaGraphvizFormatter_FunctionGetUniqueName (const ASTNode_t *node);

/**
 * Formats the given ASTNode as a directed graph operator and returns the result
 * as a string.
 */
char *
FormulaGraphvizFormatter_formatOperator (const ASTNode_t *node);

/**
 * Since graphviz will interpret identical names as referring to
 * the same node presentation-wise it is better if each function node
 * has a unique name.
 * 
 * Returns the name of the operator with the name of the first child
 * prepended
 *
 * THIS COULD BE DONE BETTER
 */
char *
FormulaGraphvizFormatter_OperatorGetUniqueName (const ASTNode_t *node);

/**
 * Formats the given ASTNode as a rational number and returns the result as
 * a string. This amounts to:
 *
 *   "(numerator/denominator)"
 */
char *
FormulaGraphvizFormatter_formatRational (const ASTNode_t *node);

/**
 * Formats the given ASTNode as a real number and returns the result as
 * a string.
 */
char *
FormulaGraphvizFormatter_formatReal (const ASTNode_t *node);

/**
 * Visits the given ASTNode node.  This function is really just a
 * dispatcher to either FormulaGraphvizFormatter_visitFunction() or
 * FormulaGraphvizFormatter_visitOther().
 */
void
FormulaGraphvizFormatter_visit ( const ASTNode_t *parent,
                         const ASTNode_t *node,
                         StringBuffer_t  *sb );

/**
 * Visits the given ASTNode as a function.  For this node only the
 * traversal is preorder.
 * Writes the function as a directed graph and appends the result
 * to the StringBuffer.
 */
void
FormulaGraphvizFormatter_visitFunction ( const ASTNode_t *parent,
                                 const ASTNode_t *node,
                                 StringBuffer_t  *sb );

/**
 * Visits the given ASTNode as the function "log(10, x)" and in doing so,
 * formats it as "log10(x)" (where x is any subexpression).
 * Writes the function as a directed graph and appends the result
 * to the StringBuffer.
 * 
 * A seperate function may not be strictly speaking necessary for graphs
 */
void
FormulaGraphvizFormatter_visitLog10 ( const ASTNode_t *parent,
                              const ASTNode_t *node,
                              StringBuffer_t  *sb );

/**
 * Visits the given ASTNode as the function "root(2, x)" and in doing so,
 * formats it as "sqrt(x)" (where x is any subexpression).
 * Writes the function as a directed graph and appends the result
 * to the StringBuffer.
 * 
 * A seperate function may not be strictly speaking necessary for graphs
 */
void
FormulaGraphvizFormatter_visitSqrt ( const ASTNode_t *parent,
                             const ASTNode_t *node,
                             StringBuffer_t  *sb );

/**
 * Visits the given ASTNode as a unary minus.  For this node only the
 * traversal is preorder.
 * Writes the function as a directed graph and appends the result
 * to the StringBuffer.
 * 
 * A seperate function may not be strictly speaking necessary for graphs
 */
void
FormulaGraphvizFormatter_visitUMinus ( const ASTNode_t *parent,
                               const ASTNode_t *node,
                               StringBuffer_t  *sb );

/**
 * Visits the given ASTNode and continues the inorder traversal.
 * Writes the function as a directed graph and appends the result
 * to the StringBuffer.
 */
void
FormulaGraphvizFormatter_visitOther ( const ASTNode_t *parent,
                              const ASTNode_t *node,
                              StringBuffer_t  *sb );




END_C_DECLS


#endif  /* !SWIG */
#endif  /* FormulaGraphvizFormatter_h */