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## @file CMakeLists.txt
## @brief CMake build script for example programs
## @author Frank T. Bergmann
##
## <!--------------------------------------------------------------------------
## This file is part of libSBML. Please visit http://sbml.org for more
## information about SBML, and the latest version of libSBML.
##
## Copyright (C) 2013-2018 jointly by the following organizations:
## 1. California Institute of Technology, Pasadena, CA, USA
## 2. EMBL European Bioinformatics Institute (EMBL-EBI), Hinxton, UK
## 3. University of Heidelberg, Heidelberg, Germany
##
## Copyright (C) 2009-2013 jointly by the following organizations:
## 1. California Institute of Technology, Pasadena, CA, USA
## 2. EMBL European Bioinformatics Institute (EMBL-EBI), Hinxton, UK
##
## Copyright (C) 2006-2008 by the California Institute of Technology,
## Pasadena, CA, USA
##
## Copyright (C) 2002-2005 jointly by the following organizations:
## 1. California Institute of Technology, Pasadena, CA, USA
## 2. Japan Science and Technology Agency, Japan
##
## This library is free software; you can redistribute it and/or modify it
## under the terms of the GNU Lesser General Public License as published by
## the Free Software Foundation. A copy of the license agreement is provided
## in the file named "LICENSE.txt" included with this software distribution
## and also available online as http://sbml.org/software/libsbml/license.html
## ------------------------------------------------------------------------ -->
find_package(Java COMPONENTS Development REQUIRED)
if (JAVA_COMPATIBILITY)
SET(COMPAT_ARGS "-source ${JAVA_COMPATIBILITY} -target ${JAVA_COMPATIBILITY}")
endif()
foreach(file
convertCobraToFbc
convertFbcToCobra
fbc_example1
)
file(TO_NATIVE_PATH ${CMAKE_CURRENT_BINARY_DIR} CURRENT_BIN)
file(TO_NATIVE_PATH ${CMAKE_CURRENT_BINARY_DIR}/../../../src/bindings/java/libsbmlj.jar CURRENT_JAR )
file(TO_NATIVE_PATH ${CMAKE_CURRENT_SOURCE_DIR}/${file}.java CURRENT_FILE)
add_custom_command(
OUTPUT ${file}.class
COMMAND "${Java_JAVAC_EXECUTABLE}"
ARGS -cp ".${FILE_SEP}\"${CURRENT_JAR}\"${FILE_SEP}${CMAKE_CURRENT_SOURCE_DIR}"
${CURRENT_FILE}
${COMPAT_ARGS}
-d ${CMAKE_CURRENT_BINARY_DIR}
MAIN_DEPENDENCY "${CMAKE_CURRENT_SOURCE_DIR}/../../../src/bindings/java/local.i"
WORKING_DIRECTORY "${CMAKE_CURRENT_BINARY_DIR}"
DEPENDS ${CMAKE_CURRENT_SOURCE_DIR}/${file}.java
COMMENT "Build java example ${file}"
)
add_custom_target(example_fbc_java_${file} ALL
DEPENDS
${CMAKE_CURRENT_BINARY_DIR}/${file}.class
SOURCES
${CMAKE_CURRENT_SOURCE_DIR}/${file}.java
)
add_dependencies(example_fbc_java_${file} binding_java_jar)
endforeach()
if(WITH_JAVA)
# install java examples
file(GLOB java_samples "${CMAKE_CURRENT_SOURCE_DIR}/java/*.java")
install(FILES ${java_samples} DESTINATION ${MISC_PREFIX}examples/java/fbc)
endif()
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