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/**
* @file invalidity_test.cpp
* @brief SBML hierarchical composition example
* @author Lucian Smith
*
* This file is part of libSBML. Please visit http://sbml.org for more
* information about SBML, and the latest version of libSBML.
*/
#include <iostream>
#include <sstream>
#include <sbml/SBMLTypes.h>
#include <sbml/extension/SBMLExtensionRegister.h>
#include <sbml/extension/SBMLExtensionRegistry.h>
#include <sbml/packages/comp/extension/CompExtension.h>
#include <sbml/packages/comp/extension/CompSBasePlugin.h>
#include <sbml/packages/comp/extension/CompSBMLDocumentPlugin.h>
#include <sbml/packages/comp/extension/CompModelPlugin.h>
#include <sbml/conversion/SBMLConverterRegister.h>
#include <sbml/conversion/SBMLConverterRegistry.h>
#include <sbml/conversion/SBMLConverter.h>
#ifdef WIN32
#include <conio.h>
#endif
LIBSBML_CPP_NAMESPACE_USE
using namespace std;
void createTest1();
void createTest2();
void createTest3();
void createTest4();
int main(int argc,char** argv){
createTest4();
createTest3();
createTest2();
createTest1();
return 0;
}
//First, do everything correctly:
void createTest1()
{
SBMLNamespaces sbmlns(3,1,"comp",1);
CompPkgNamespaces csbmlns(3,1,1,"comp");
SBMLDocument document(&sbmlns);
CompSBMLDocumentPlugin* compdoc = static_cast<CompSBMLDocumentPlugin*>(document.getPlugin("comp"));
compdoc->setRequired(false);
Model model(&sbmlns);
Parameter p(&sbmlns);
p.setConstant(false);
p.setId("p8");
p.setValue(8);
model.addParameter(&p);
CompModelPlugin* compmod = static_cast<CompModelPlugin*>(model.getPlugin("comp"));
Port port(3,1,1);
port.setId("port1");
port.setIdRef("p8");
compmod->addPort(&port);
document.setModel(&model);
writeSBMLToFile(&document, "invalidity_test1.xml");
}
//Screw things up by creating the document unaware of comp. This creates '<listOfPorts>' instead of '<comp:listOfPorts>'
void createTest2()
{
SBMLNamespaces sbmlns(3,1,"comp",1);
CompPkgNamespaces csbmlns(3,1,1,"comp");
SBMLDocument document(3,1);
Model model(&sbmlns);
Parameter p(&sbmlns);
p.setConstant(false);
p.setId("p8");
p.setValue(8);
model.addParameter(&p);
CompModelPlugin* compmod = static_cast<CompModelPlugin*>(model.getPlugin("comp"));
Port port(3,1,1);
port.setId("port1");
port.setIdRef("p8");
compmod->addPort(&port);
document.setModel(&model);
writeSBMLToFile(&document, "invalidity_test2.xml");
}
//Screw things up by never setting 'required'
void createTest3()
{
SBMLNamespaces sbmlns(3,1,"comp",1);
CompPkgNamespaces csbmlns(3,1,1,"comp");
SBMLDocument document(&sbmlns);
CompSBMLDocumentPlugin* compdoc = static_cast<CompSBMLDocumentPlugin*>(document.getPlugin("comp"));
Model model(&sbmlns);
Parameter p(&sbmlns);
p.setConstant(false);
p.setId("p8");
p.setValue(8);
model.addParameter(&p);
CompModelPlugin* compmod = static_cast<CompModelPlugin*>(model.getPlugin("comp"));
Port port(3,1,1);
port.setId("port1");
port.setIdRef("p8");
compmod->addPort(&port);
document.setModel(&model);
writeSBMLToFile(&document, "invalidity_test3.xml");
}
//Screw things up by setting 'required' to 'true'
void createTest4()
{
SBMLNamespaces sbmlns(3,1,"comp",1);
CompPkgNamespaces csbmlns(3,1,1,"comp");
SBMLDocument document(&sbmlns);
CompSBMLDocumentPlugin* compdoc = static_cast<CompSBMLDocumentPlugin*>(document.getPlugin("comp"));
compdoc->setRequired(true);
Model model(&sbmlns);
Parameter p(&sbmlns);
p.setConstant(false);
p.setId("p8");
p.setValue(8);
model.addParameter(&p);
CompModelPlugin* compmod = static_cast<CompModelPlugin*>(model.getPlugin("comp"));
Port port(3,1,1);
port.setId("port1");
port.setIdRef("p8");
compmod->addPort(&port);
document.setModel(&model);
writeSBMLToFile(&document, "invalidity_test4.xml");
}
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