1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
|
## @configure_input@
##
## @file Makefile
## @brief Builds the Java example programs
## @author Michael Hucka (Caltech)
## @author Ben Bornstein (Caltech)
## @author Nicolas Rodriguez (EMBL-EBI)
##
##
## <!--------------------------------------------------------------------------
## This file is part of libSBML. Please visit http://sbml.org for more
## information about SBML, and the latest version of libSBML.
##
## Copyright (C) 2013-2018 jointly by the following organizations:
## 1. California Institute of Technology, Pasadena, CA, USA
## 2. EMBL European Bioinformatics Institute (EMBL-EBI), Hinxton, UK
## 3. University of Heidelberg, Heidelberg, Germany
##
## Copyright (C) 2009-2013 jointly by the following organizations:
## 1. California Institute of Technology, Pasadena, CA, USA
## 2. EMBL European Bioinformatics Institute (EMBL-EBI), Hinxton, UK
##
## Copyright (C) 2006-2008 by the California Institute of Technology,
## Pasadena, CA, USA
##
## Copyright (C) 2002-2005 jointly by the following organizations:
## 1. California Institute of Technology, Pasadena, CA, USA
## 2. Japan Science and Technology Agency, Japan
##
## This library is free software; you can redistribute it and/or modify it
## under the terms of the GNU Lesser General Public License as published by
## the Free Software Foundation. A copy of the license agreement is provided
## in the file named "LICENSE.txt" included with this software distribution
## and also available online as http://sbml.org/software/libsbml/license.html
## ------------------------------------------------------------------------ -->
CLASSPATH = ../../src/bindings/java/libsbmlj.jar:.
# The values of the following variables are obtained using the libSBML
# `configure' program.
JAVA = @JAVA@
JAVAC = @JAVAC@
JFLAGS = -classpath $(CLASSPATH)
# The rest of this Makefile remains static regardless of the values
# assigned to the variables above.
classes = convertSBML.class printMath.class printSBML.class readSBML.class \
translateMath.class validateSBML.class evaluateMath.class \
echoSBML.class addCVTerms.class addModelHistory.class \
printUnits.class printAnnotation.class printNotes.class \
appendAnnotation.class unsetAnnotation.class unsetNotes.class \
addCustomValidator.class addingEvidenceCodes_1.class \
addingEvidenceCodes_2.class callExternalValidator.class \
createExampleSBML.class printRegisteredPackages.class \
printsupported.class stripPackage.class
all: $(classes)
# The following is the generic rule for making a .class file from one of
# the .java files in this directory. The funny business with evaluateMath
# is because we have to use a special rule later below that takes into
# account the fact that evaluateMath needs Java version 1.5 or higher.
$(filter-out evaluateMath.class,$(classes)): %.class: %.java
ifeq "@JAVA@" ""
@echo "libSBML must be configured with --with-java to use the Java bindings."
exit 1
else
$(JAVAC) $(JFLAGS) $^
endif
# The following is a special case for evaluateMath because it requires JDK 1.5.
evaluateMath.class: evaluateMath.java
ifeq "@JAVA@" ""
@echo "libSBML must be configured with --with-java to use the Java bindings."
exit 1
else
@jversion=`$(JAVA) -version 2>&1 | head -n 1`; \
jshort=`echo $$jversion | sed -e 's/.*\([0-9]\)\.\([0-9]\)\.\([0-9]\).*/\1\2\3/'`; \
if test $$jshort -lt 150; then \
echo "*** Our apologies, but JDK 1.5+ is required to compile evaluateMath. ***"; \
else \
$(JAVAC) $(JFLAGS) $^; \
fi
endif
# The rest of the commands here are general-purpose things.
clean:
/bin/rm -f $(classes) *~
distclean: clean
/bin/rm Makefile
# The following are generic 'make' targets that are not used in
# this simple examples directory.
check dist docs install install-docs uninstall \
mostlyclean maintainer-clean installcheck dvi pdf ps info html \
distcheck:
|
