1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343 344 345 346 347 348 349 350 351 352 353 354 355 356
|
package com.wcohen.ss;
import com.wcohen.ss.api.*;
import java.util.*;
/**
* Abstract StringDistanceLearner class which combines results of a number of
* inner distance metrics, learned by a number of inner distance learners.
*/
public abstract class CombinedStringDistanceLearner implements StringDistanceLearner
{
protected StringDistanceLearner[] innerLearners;
protected String delim;
// use some reasonable defaults
public CombinedStringDistanceLearner() {
innerLearners =
new StringDistanceLearner[] {
new JaroWinkler()
,new ScaledLevenstein()
,new Jaccard()
,new TFIDF()
,new JaroWinklerTFIDF()
};
delim = null;
}
public CombinedStringDistanceLearner(StringDistanceLearner[] innerLearners,String delim) {
this.innerLearners = innerLearners;
this.delim = delim;
}
//
// stuff for subclasses to implement
//
/** Pass an iterator over unlabeled string wrappers to the score-combination learner,
* just in case that's useful.
*/
abstract protected void comboSetStringWrapperPool(Iterator i); // on unlabeled StringWrapper's
/** Set up a pool of (possibly unlabeled) instance distances, for the learner
* to make queries from.
*/
abstract protected void comboSetDistanceInstancePool(Iterator i); // on list of MyMultiDistanceInstance's
/**
* Poll the routine that learns to combine inner distance scores to see if it
* wants to make more queries.
*/
abstract protected boolean comboHasNextQuery(); // active learning
/** Get the next query from the score-combination learner.
*/
abstract protected DistanceInstance comboNextQuery(); // active learning
/** Pass a labeled example to the score-combination learner.
*/
abstract protected void comboAddExample(DistanceInstance di); // ac
/** Get the final string distance, which will be based on the distances learned by the
* inner learners, as well as the combination scheme learned by comboSetAnswer, comboTrain,
* and etc.
*/
abstract public StringDistance getDistance();
//
// routines for delegating
//
/** Pass the training data along to the inner learners. */
public void setStringWrapperPool(StringWrapperIterator it)
{
// train i-th learner on i-th field of string wrapper
List buffer = asMultiStringWrapperList(it);
if (buffer.size()==0) throw new IllegalStateException("need some unlabeled strings");
MultiStringWrapper prototype = (MultiStringWrapper)buffer.get(0);
for (int i=0; i<prototype.size(); i++) {
int j = prototype.getDistanceLearnerIndex(i);
innerLearners[j].setStringWrapperPool( new JthStringWrapperValueIterator( j, buffer.iterator() ));
}
comboSetStringWrapperPool( buffer.iterator() );
}
/** Pass the training data along to the inner learners. */
public void setDistanceInstancePool(DistanceInstanceIterator it)
{
// need to save out the i-th field, if it's been prepared.
List buffer = asMultiDistanceInstanceList(it);
if (buffer.size()==0) return;
MyMultiDistanceInstance instance = (MyMultiDistanceInstance)buffer.get(0);
MultiStringWrapper prototype = asMultiStringWrapper( instance.getA() );
for (int i=0; i<prototype.size(); i++) {
int j = prototype.getDistanceLearnerIndex(i);
innerLearners[j].setDistanceInstancePool( new JthDistanceInstanceIterator( j, buffer.iterator() ) );
}
comboSetDistanceInstancePool( buffer.iterator() );
}
/** See if someone has a query */
public boolean hasNextQuery() {
for (int i=0; i<innerLearners.length; i++) {
if (innerLearners[i].hasNextQuery()) return true;
}
return comboHasNextQuery();
}
/** Get a next query from one of the sublearners
*/
public DistanceInstance nextQuery() {
// need to save out the i-th field, if it's been prepared.
// poll sublearners in random order, to be fair
// indices [0,innerLearners.length-1] are the inner learners,
// index innerLearners.length is the comboLearner
ArrayList indices = new ArrayList(innerLearners.length+1);
for (int i=0; i<indices.size(); i++) indices.set(i, new Integer(i) );
Collections.shuffle(indices);
for (int i=0; i<indices.size(); i++) {
int k = ((Integer)indices.get(i)).intValue();
if ( k==innerLearners.length && comboHasNextQuery() ) {
return comboNextQuery();
} else if (innerLearners[k].hasNextQuery()) {
return innerLearners[k].nextQuery();
}
}
throw new IllegalStateException("someone seems to have forgotten they want a query");
}
/** Pass new labels to the sublearners.
*/
public void addExample(DistanceInstance answeredQuery) {
MyMultiDistanceInstance di = asMultiDistanceInstance( answeredQuery );
for (int i=0; i<innerLearners.length; i++) {
innerLearners[i].addExample( di.get(i) );
}
comboAddExample( di );
}
/** Prepare data for the sublearners.
*/
public StringWrapperIterator prepare(StringWrapperIterator it)
{
List multiWrappers = asMultiStringWrapperList(it);
if (multiWrappers.size()==0) return new BasicStringWrapperIterator( Collections.EMPTY_SET.iterator() );
MultiStringWrapper prototype = (MultiStringWrapper)multiWrappers.get(0);
for (int i=0; i<prototype.size(); i++) {
int j = prototype.getDistanceLearnerIndex(i);
StringDistanceLearner learner = innerLearners[j];
StringWrapperIterator prepped = learner.prepare( new JthStringWrapperValueIterator( j, multiWrappers.iterator() ) );
for (int k=0; k<multiWrappers.size(); k++) {
MultiStringWrapper msw = (MultiStringWrapper)multiWrappers.get(k);
StringWrapper w = prepped.nextStringWrapper();
msw.set( i, w );
}
}
return new BasicStringWrapperIterator( multiWrappers.iterator() );
}
/** Prepare data for the learners.
*/
public DistanceInstanceIterator prepare(DistanceInstanceIterator it)
{
List multiDistances = asMultiDistanceInstanceList(it);
return new BasicDistanceInstanceIterator( multiDistances.iterator() );
}
//
// support routines for splitting and merging multiple StringWrapper's and DistanceInstance's
//
/* lazily convert to a List of MultiStringWrapper list */
protected List asMultiStringWrapperList(StringWrapperIterator i) {
List buffer = new ArrayList();
while (i.hasNext()) {
StringWrapper w = i.nextStringWrapper();
MultiStringWrapper mw = asMultiStringWrapper(w);
buffer.add(mw);
}
return buffer;
}
/* lazily convert to a MultiStringWrapper */
protected MultiStringWrapper asMultiStringWrapper(StringWrapper w)
{
if (w instanceof MultiStringWrapper) return (MultiStringWrapper)w;
else {
MultiStringWrapper mw = new MultiStringWrapper( w.unwrap(), innerLearners.length, delim);
for (int i=0; i<mw.size(); i++) {
mw.set(i, prepareForLearner( mw.get(i), innerLearners[mw.getDistanceLearnerIndex(i)] ) );
}
return mw;
}
}
/** Prepare a single StringWrapper for a learner */
private StringWrapper prepareForLearner(StringWrapper w,StringDistanceLearner learner) {
StringWrapperIterator it = new BasicStringWrapperIterator( Collections.singleton(w).iterator() );
return learner.prepare(it).nextStringWrapper();
}
/** Iterate over the j-th field of MultiStringWrapper */
protected class JthStringWrapperValueIterator implements StringWrapperIterator {
private Iterator i;
private int j;
public JthStringWrapperValueIterator(int j,Iterator i) { this.j=j; this.i=i; }
public boolean hasNext() { return i.hasNext(); }
public Object next() { return ((MultiStringWrapper)i.next()).get(j); }
public StringWrapper nextStringWrapper() { return (StringWrapper) next(); }
public void remove() { throw new UnsupportedOperationException("can't remove"); }
}
/* lazily convert to a List of DistanceInstance's with MultiStringWrapper's in each place */
protected List asMultiDistanceInstanceList(DistanceInstanceIterator i) {
List buffer = new ArrayList();
while (i.hasNext()) {
DistanceInstance di = i.nextDistanceInstance();
buffer.add( asMultiDistanceInstance( i.nextDistanceInstance() ) );
}
return buffer;
}
protected MyMultiDistanceInstance asMultiDistanceInstance(DistanceInstance di) {
if (di instanceof MyMultiDistanceInstance) return (MyMultiDistanceInstance)di;
else return new MyMultiDistanceInstance( di.getA(), di.getB(), di.isCorrect(), di.getDistance());
}
protected class MyDistanceInstance implements DistanceInstance {
protected StringWrapper a,b;
protected boolean correct;
protected double distance;
public MyDistanceInstance(StringWrapper a,StringWrapper b,boolean correct,double distance) {
this.a = a;
this.b = b;
this.correct = correct;
this.distance = distance;
}
public StringWrapper getA() { return a; }
public StringWrapper getB() { return b; }
public boolean isCorrect() { return correct; }
public double getDistance() { return distance; }
public void setDistance(double distance) { this.distance = distance; }
}
protected class MyMultiDistanceInstance extends MyDistanceInstance {
MultiStringWrapper ma,mb;
public MyMultiDistanceInstance(StringWrapper a,StringWrapper b,boolean correct,double distance) {
super(a,b,correct,distance);
ma = asMultiStringWrapper(a);
mb = asMultiStringWrapper(b);
}
public StringWrapper getA(int j) { return ma.get(j); }
public StringWrapper getB(int j) { return mb.get(j); }
public DistanceInstance get(int j) { return new MyDistanceInstance( ma.get(j), mb.get(j), correct, distance); }
public String toString() { return "["+ma+";"+mb+"]"; }
}
/** Iterate over the j-th field of MultiStringWrapper's in a DistanceInstance of MultiStringWrapper's */
protected class JthDistanceInstanceIterator implements DistanceInstanceIterator {
private Iterator i;
private int j;
public JthDistanceInstanceIterator(int j, Iterator i) { this.j=j; this.i=i; }
public boolean hasNext() { return i.hasNext(); }
public DistanceInstance nextDistanceInstance() { return (DistanceInstance)next(); }
public Object next() { return ((MyMultiDistanceInstance) i.next()).get(j); }
public void remove() { throw new UnsupportedOperationException("can't remove"); }
}
/** Get an array of trained inner distances. */
protected StringDistance[] getInnerDistances()
{
StringDistance[] innerDistances = new StringDistance[ innerLearners.length ];
for (int j=0; j<innerLearners.length; j++) {
innerDistances[j] = innerLearners[j].getDistance();
}
return innerDistances;
}
/**
* Abstract class for combining innerDistances's
*/
protected abstract class CombinedStringDistance implements StringDistance
{
protected StringDistance[] innerDistances;
protected MultiStringWrapper prototype;
public CombinedStringDistance(StringDistance[] innerDistances, MultiStringWrapper prototype)
{
this.innerDistances = innerDistances;
this.prototype = prototype;
}
final public double score(String s, String t)
{
return score(prepare(s), prepare(t));
}
final public String explainScore(String s, String t)
{
return explainScore(prepare(s), prepare(t));
}
final public StringWrapper prepare(String s)
{
MultiStringWrapper ms = asMultiStringWrapper(new BasicStringWrapper(s));
ms.prepare( innerDistances );
return ms;
}
final public double score(StringWrapper s,StringWrapper t)
{
MultiStringWrapper ms = asMultiStringWrapper(s);
MultiStringWrapper mt = asMultiStringWrapper(t);
ms.prepare(innerDistances);
mt.prepare(innerDistances);
if (ms.size() != mt.size() || ms.size()!=prototype.size()) {
throw new IllegalStateException("ms,mt="+ms+","+mt+" expected MultiStringWrapper's of size "+prototype.size());
}
return doScore(ms,mt);
}
final public String explainScore(StringWrapper s, StringWrapper t) {
StringBuffer buf = new StringBuffer();
MultiStringWrapper ms = asMultiStringWrapper(s);
MultiStringWrapper mt = asMultiStringWrapper(t);
if (ms.size() != mt.size() || ms.size()!=prototype.size()) {
throw new IllegalStateException("expected MultiStringWrapper's of size "+prototype.size());
}
for (int i=0; i<ms.size(); i++) {
StringDistance d = innerDistances[ ms.getDistanceLearnerIndex(i) ];
buf.append("score of "+d+" on '"+ms.get(i)+"' and '"+mt.get(i)+"' = "+d.score( ms.get(i), mt.get(i) )+"\n");
}
buf.append( explainCombination(ms, mt) );
return buf.toString();
}
/** Produce a score, assuming ms and mt are the correct sizes, and fully prepared. */
abstract protected double doScore(MultiStringWrapper ms,MultiStringWrapper mt);
/** Explain how the primitive scores were combined. */
abstract protected String explainCombination(MultiStringWrapper ms,MultiStringWrapper mt);
/** Help class for 'toString()' which produces a description of the distances being combined. */
protected String innerDistanceString()
{
StringBuffer buf = new StringBuffer("");
for (int i=0; i<innerDistances.length; i++)
{
buf.append(" "+innerDistances[i]);
}
return buf.toString();
}
}
}
|