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/*
* Copyright 2007 - 2018 ETH Zuerich, CISD and SIS.
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
package ch.systemsx.cisd.hdf5;
import static ch.systemsx.cisd.base.convert.NativeData.LONG_SIZE;
import static ch.systemsx.cisd.hdf5.HDF5CompoundByteifyerFactory.getArray;
import static ch.systemsx.cisd.hdf5.HDF5CompoundByteifyerFactory.getList;
import static ch.systemsx.cisd.hdf5.HDF5CompoundByteifyerFactory.getMap;
import static ch.systemsx.cisd.hdf5.HDF5CompoundByteifyerFactory.putMap;
import static ch.systemsx.cisd.hdf5.HDF5CompoundByteifyerFactory.setArray;
import static ch.systemsx.cisd.hdf5.HDF5CompoundByteifyerFactory.setList;
import static hdf.hdf5lib.HDF5Constants.H5T_STD_B64LE;
import java.lang.reflect.Field;
import java.util.BitSet;
import ch.systemsx.cisd.hdf5.HDF5CompoundByteifyerFactory.AccessType;
import ch.systemsx.cisd.hdf5.HDF5CompoundByteifyerFactory.IHDF5CompoundMemberBytifyerFactory;
import ch.systemsx.cisd.hdf5.HDF5ValueObjectByteifyer.IFileAccessProvider;
import ch.systemsx.cisd.hdf5.hdf5lib.HDFHelper;
/**
* A {@link HDF5CompoundByteifyerFactory.IHDF5CompoundMemberBytifyerFactory} for <code>BitSet</code>
*
* @author Bernd Rinn
*/
class HDF5CompoundMemberByteifyerBitSetFactory implements IHDF5CompoundMemberBytifyerFactory
{
@Override
public boolean canHandle(Class<?> clazz, HDF5CompoundMemberInformation memberInfoOrNull)
{
if (memberInfoOrNull != null)
{
return (clazz == BitSet.class)
&& memberInfoOrNull.getType().getDataClass() == HDF5DataClass.BITFIELD;
} else
{
return (clazz == BitSet.class);
}
}
@Override
public Class<?> tryGetOverrideJavaType(HDF5DataClass dataClass, int rank, int elementSize,
HDF5DataTypeVariant typeVariantOrNull)
{
return null;
}
@Override
public HDF5MemberByteifyer createBytifyer(final AccessType accessType, final Field fieldOrNull,
final HDF5CompoundMemberMapping member,
final HDF5CompoundMemberInformation compoundMemberInfoOrNull,
HDF5EnumerationType enumTypeOrNull, final Class<?> memberClazz, final int index,
final int offset, int memOffset, final IFileAccessProvider fileInfoProvider)
{
final String memberName = member.getMemberName();
final int memberTypeLengthInLongs;
if (compoundMemberInfoOrNull == null)
{
final int memberTypeLengthInBits = member.getMemberTypeLength();
memberTypeLengthInLongs =
memberTypeLengthInBits / 64 + (memberTypeLengthInBits % 64 != 0 ? 1 : 0);
} else
{
memberTypeLengthInLongs = compoundMemberInfoOrNull.getType().getNumberOfElements();
}
if (memberTypeLengthInLongs <= 0)
{
throw new IllegalArgumentException(
"Length of a bit field must be a positive number (len="
+ memberTypeLengthInLongs + ").");
}
final long storageTypeId = member.getStorageDataTypeId();
final long memberTypeId =
(storageTypeId < 0) ? fileInfoProvider.getArrayTypeId(H5T_STD_B64LE,
memberTypeLengthInLongs) : storageTypeId;
switch (accessType)
{
case FIELD:
return createByteifyerForField(fieldOrNull, memberName, offset, memOffset,
memberTypeLengthInLongs, memberTypeId, member.tryGetTypeVariant());
case MAP:
return createByteifyerForMap(memberName, offset, memOffset,
memberTypeLengthInLongs, memberTypeId, member.tryGetTypeVariant());
case LIST:
return createByteifyerForList(memberName, index, offset, memOffset,
memberTypeLengthInLongs, memberTypeId, member.tryGetTypeVariant());
case ARRAY:
return createByteifyerForArray(memberName, index, offset, memOffset,
memberTypeLengthInLongs, memberTypeId, member.tryGetTypeVariant());
default:
throw new Error("Unknown access type");
}
}
private HDF5MemberByteifyer createByteifyerForField(final Field field, final String memberName,
final int offset, int memOffset, final int memberTypeLengthInLongs,
final long memberTypeId, final HDF5DataTypeVariant typeVariant)
{
ReflectionUtils.ensureAccessible(field);
return new HDF5MemberByteifyer(field, memberName, memberTypeLengthInLongs * LONG_SIZE,
offset, memOffset, false, typeVariant)
{
@Override
int getElementSize()
{
return 8;
}
@Override
protected long getMemberStorageTypeId()
{
return memberTypeId;
}
@Override
protected long getMemberNativeTypeId()
{
return -1;
}
@Override
public byte[] byteify(long compoundDataTypeId, Object obj)
throws IllegalAccessException
{
final BitSet bs = (BitSet) field.get(obj);
return HDFHelper.longToByte(BitSetConversionUtils.toStorageForm(bs));
}
@Override
public void setFromByteArray(long compoundDataTypeId, Object obj, byte[] byteArr,
int arrayOffset) throws IllegalAccessException
{
final BitSet bs =
BitSetConversionUtils.fromStorageForm(HDFHelper.byteToLong(byteArr,
arrayOffset + offsetInMemory, memberTypeLengthInLongs));
field.set(obj, bs);
}
};
}
private HDF5MemberByteifyer createByteifyerForMap(final String memberName, final int offset,
int memOffset, final int memberTypeLengthInLongs, final long memberTypeId,
final HDF5DataTypeVariant typeVariant)
{
return new HDF5MemberByteifyer(null, memberName, memberTypeLengthInLongs * LONG_SIZE,
offset, memOffset, false, typeVariant)
{
@Override
int getElementSize()
{
return 8;
}
@Override
protected long getMemberStorageTypeId()
{
return memberTypeId;
}
@Override
protected long getMemberNativeTypeId()
{
return -1;
}
@Override
public byte[] byteify(long compoundDataTypeId, Object obj)
throws IllegalAccessException
{
final BitSet bs = (BitSet) getMap(obj, memberName);
return HDFHelper.longToByte(BitSetConversionUtils.toStorageForm(bs));
}
@Override
public void setFromByteArray(long compoundDataTypeId, Object obj, byte[] byteArr,
int arrayOffset) throws IllegalAccessException
{
final BitSet bitSet =
BitSetConversionUtils.fromStorageForm(HDFHelper.byteToLong(byteArr,
arrayOffset + offsetInMemory, memberTypeLengthInLongs));
putMap(obj, memberName, bitSet);
}
};
}
private HDF5MemberByteifyer createByteifyerForList(final String memberName, final int index,
final int offset, int memOffset, final int memberTypeLengthInLongs,
final long memberTypeId, final HDF5DataTypeVariant typeVariant)
{
return new HDF5MemberByteifyer(null, memberName, memberTypeLengthInLongs * LONG_SIZE,
offset, memOffset, false, typeVariant)
{
@Override
int getElementSize()
{
return 8;
}
@Override
protected long getMemberStorageTypeId()
{
return memberTypeId;
}
@Override
protected long getMemberNativeTypeId()
{
return -1;
}
@Override
public byte[] byteify(long compoundDataTypeId, Object obj)
throws IllegalAccessException
{
final BitSet bs = (BitSet) getList(obj, index);
return HDFHelper.longToByte(BitSetConversionUtils.toStorageForm(bs));
}
@Override
public void setFromByteArray(long compoundDataTypeId, Object obj, byte[] byteArr,
int arrayOffset) throws IllegalAccessException
{
final BitSet bitSet =
BitSetConversionUtils.fromStorageForm(HDFHelper.byteToLong(byteArr,
arrayOffset + offsetInMemory, memberTypeLengthInLongs));
setList(obj, index, bitSet);
}
};
}
private HDF5MemberByteifyer createByteifyerForArray(final String memberName, final int index,
final int offset, int memOffset, final int memberTypeLengthInLongs,
final long memberTypeId, final HDF5DataTypeVariant typeVariant)
{
return new HDF5MemberByteifyer(null, memberName, memberTypeLengthInLongs * LONG_SIZE,
offset, memOffset, false, typeVariant)
{
@Override
int getElementSize()
{
return 8;
}
@Override
protected long getMemberStorageTypeId()
{
return memberTypeId;
}
@Override
protected long getMemberNativeTypeId()
{
return -1;
}
@Override
public byte[] byteify(long compoundDataTypeId, Object obj)
throws IllegalAccessException
{
final BitSet bs = (BitSet) getArray(obj, index);
return HDFHelper.longToByte(BitSetConversionUtils.toStorageForm(bs));
}
@Override
public void setFromByteArray(long compoundDataTypeId, Object obj, byte[] byteArr,
int arrayOffset) throws IllegalAccessException
{
final BitSet bitSet =
BitSetConversionUtils.fromStorageForm(HDFHelper.byteToLong(byteArr,
arrayOffset + offsetInMemory, memberTypeLengthInLongs));
setArray(obj, index, bitSet);
}
};
}
}
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