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/*
* Copyright 2007 - 2018 ETH Zuerich, CISD and SIS.
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
package ch.systemsx.cisd.hdf5;
import static ch.systemsx.cisd.hdf5.HDF5Utils.ENUM_PREFIX;
import static ch.systemsx.cisd.hdf5.HDF5Utils.createDataTypePath;
import java.util.Iterator;
import hdf.hdf5lib.exceptions.HDF5JavaException;
import ch.systemsx.cisd.hdf5.HDF5BaseReader.DataSpaceParameters;
import ch.systemsx.cisd.hdf5.HDF5DataTypeInformation.DataTypeInfoOptions;
import ch.systemsx.cisd.hdf5.HDF5EnumerationType.EnumStorageForm;
import ch.systemsx.cisd.hdf5.cleanup.ICallableWithCleanUp;
import ch.systemsx.cisd.hdf5.cleanup.ICleanUpRegistry;
/**
* The implementation of {@link IHDF5EnumReader}.
*
* @author Bernd Rinn
*/
class HDF5EnumReader implements IHDF5EnumReader
{
protected final HDF5BaseReader baseReader;
HDF5EnumReader(HDF5BaseReader baseReader)
{
assert baseReader != null;
this.baseReader = baseReader;
}
// /////////////////////
// Types
// /////////////////////
@Override
public HDF5EnumerationType getType(final String name)
{
baseReader.checkOpen();
final String dataTypePath =
createDataTypePath(ENUM_PREFIX, baseReader.houseKeepingNameSuffix, name);
final long storageDataTypeId = baseReader.getDataTypeId(dataTypePath);
return baseReader.getEnumTypeForStorageDataType(name, storageDataTypeId, true, null, null,
baseReader.fileRegistry);
}
@Override
public HDF5EnumerationType getType(final String name, final String[] values)
throws HDF5JavaException
{
return getType(name, values, true);
}
@Override
public <T extends Enum<?>> HDF5EnumerationType getType(final Class<T> enumClass)
throws HDF5JavaException
{
return getType(enumClass.getSimpleName(), ReflectionUtils.getEnumOptions(enumClass), true);
}
@Override
public HDF5EnumerationType getType(final Class<? extends Enum<?>> enumClass, final boolean check)
throws HDF5JavaException
{
return getType(enumClass.getSimpleName(), ReflectionUtils.getEnumOptions(enumClass), check);
}
@Override
public HDF5EnumerationType getType(final String name, final Class<? extends Enum<?>> enumClass)
throws HDF5JavaException
{
return getType(name, ReflectionUtils.getEnumOptions(enumClass), true);
}
@Override
public <T extends Enum<?>> HDF5EnumerationType getType(final String name,
final Class<T> enumClass, final boolean check) throws HDF5JavaException
{
return getType(name, ReflectionUtils.getEnumOptions(enumClass), check);
}
@Override
public HDF5EnumerationType getType(final String name, final String[] values, final boolean check)
throws HDF5JavaException
{
baseReader.checkOpen();
final HDF5EnumerationType dataType = getType(name);
if (check)
{
baseReader.checkEnumValues(dataType.getStorageTypeId(), values, name);
}
return dataType;
}
@Override
public HDF5EnumerationType getType(EnumerationType genericType) throws HDF5JavaException
{
return getType(genericType, true);
}
@Override
public HDF5EnumerationType getType(EnumerationType genericType, boolean check)
throws HDF5JavaException
{
baseReader.checkOpen();
final HDF5EnumerationType dataType = getType(genericType.tryGetName());
if (check)
{
baseReader.checkEnumValues(dataType.getStorageTypeId(), genericType.getValueArray(),
genericType.tryGetName());
}
return dataType;
}
@Override
public HDF5EnumerationType getDataSetType(final String dataSetPath)
{
baseReader.checkOpen();
final ICallableWithCleanUp<HDF5EnumerationType> readEnumTypeCallable =
new ICallableWithCleanUp<HDF5EnumerationType>()
{
@Override
public HDF5EnumerationType call(ICleanUpRegistry registry)
{
final long dataSetId =
baseReader.h5.openDataSet(baseReader.fileId, dataSetPath,
registry);
return getEnumTypeForDataSetId(dataSetId, dataSetPath,
baseReader.isScaledEnum(dataSetId, registry), registry);
}
};
return baseReader.runner.call(readEnumTypeCallable);
}
private HDF5EnumerationType getEnumTypeForDataSetId(final long objectId,
final String objectName, final boolean scaledEnum, final ICleanUpRegistry registry)
{
if (scaledEnum)
{
final String enumTypeName =
baseReader.getStringAttribute(objectId, objectName, HDF5Utils
.getEnumTypeNameAttributeName(baseReader.houseKeepingNameSuffix),
false, registry);
return getType(enumTypeName);
} else
{
final long storageDataTypeId =
baseReader.h5.getDataTypeForDataSet(objectId, baseReader.fileRegistry);
return baseReader.getEnumTypeForStorageDataType(null, storageDataTypeId, true,
objectName, null, baseReader.fileRegistry);
}
}
@Override
public HDF5EnumerationType getAttributeType(final String dataSetPath, final String attributeName)
{
baseReader.checkOpen();
final ICallableWithCleanUp<HDF5EnumerationType> readEnumTypeCallable =
new ICallableWithCleanUp<HDF5EnumerationType>()
{
@Override
public HDF5EnumerationType call(ICleanUpRegistry registry)
{
final long dataSetId =
baseReader.h5.openDataSet(baseReader.fileId, dataSetPath,
registry);
final long attributeId =
baseReader.h5.openAttribute(dataSetId, attributeName, registry);
final long storageDataTypeId =
baseReader.h5.getDataTypeForAttribute(attributeId,
baseReader.fileRegistry);
return baseReader.getEnumTypeForStorageDataType(null,
storageDataTypeId, true, dataSetPath, attributeName,
baseReader.fileRegistry);
}
};
return baseReader.runner.call(readEnumTypeCallable);
}
// /////////////////////
// Attributes
// /////////////////////
@Override
public String getAttrAsString(final String objectPath, final String attributeName)
throws HDF5JavaException
{
assert objectPath != null;
assert attributeName != null;
baseReader.checkOpen();
final ICallableWithCleanUp<String> readRunnable = new ICallableWithCleanUp<String>()
{
@Override
public String call(ICleanUpRegistry registry)
{
final long objectId =
baseReader.h5.openObject(baseReader.fileId, objectPath, registry);
final long attributeId =
baseReader.h5.openAttribute(objectId, attributeName, registry);
final long storageDataTypeId =
baseReader.h5.getDataTypeForAttribute(attributeId, registry);
final long nativeDataTypeId =
baseReader.h5.getNativeDataType(storageDataTypeId, registry);
final long enumDataTypeId =
baseReader.getEnumDataTypeId(storageDataTypeId, registry);
final int size = baseReader.h5.getDataTypeSize(enumDataTypeId);
final byte[] data =
baseReader.h5.readAttributeAsByteArray(attributeId, nativeDataTypeId,
size);
final String value =
baseReader.h5.getNameForEnumOrCompoundMemberIndex(enumDataTypeId,
EnumerationType.fromStorageForm(data, 0, size));
if (value == null)
{
throw new HDF5JavaException("Attribute " + attributeName + " of object "
+ objectPath + " needs to be an Enumeration.");
}
return value;
}
};
return baseReader.runner.call(readRunnable);
}
@Override
public HDF5EnumerationValue getAttr(final String objectPath, final String attributeName)
throws HDF5JavaException
{
assert objectPath != null;
assert attributeName != null;
baseReader.checkOpen();
final ICallableWithCleanUp<HDF5EnumerationValue> readRunnable =
new ICallableWithCleanUp<HDF5EnumerationValue>()
{
@Override
public HDF5EnumerationValue call(ICleanUpRegistry registry)
{
final long objectId =
baseReader.h5.openObject(baseReader.fileId, objectPath,
registry);
final long attributeId =
baseReader.h5.openAttribute(objectId, attributeName, registry);
final long storageDataTypeId =
baseReader.h5.getDataTypeForAttribute(attributeId,
baseReader.fileRegistry);
final long enumTypeId =
baseReader.getEnumDataTypeId(storageDataTypeId,
baseReader.fileRegistry);
final HDF5EnumerationType enumType =
baseReader.getEnumTypeForStorageDataType(null, enumTypeId,
true, objectPath, attributeName,
baseReader.fileRegistry);
final long nativeDataTypeId;
if (storageDataTypeId != enumTypeId) // Array data type
{
nativeDataTypeId =
baseReader.h5
.getNativeDataType(storageDataTypeId, registry);
} else
{
nativeDataTypeId = enumType.getNativeTypeId();
}
final int enumOrdinal =
baseReader.getEnumOrdinal(attributeId, nativeDataTypeId,
enumType);
return new HDF5EnumerationValue(enumType, enumOrdinal);
}
};
return baseReader.runner.call(readRunnable);
}
@Override
public <T extends Enum<T>> T getAttr(String objectPath, String attributeName, Class<T> enumClass)
throws HDF5JavaException
{
final String value = getAttrAsString(objectPath, attributeName);
try
{
return Enum.valueOf(enumClass, value);
} catch (IllegalArgumentException ex)
{
throw new HDF5JavaException("The Java enum class " + enumClass.getCanonicalName()
+ " has no value '" + value + "'.");
}
}
@Override
public HDF5EnumerationValueArray getArrayAttr(final String objectPath,
final String attributeName) throws HDF5JavaException
{
assert objectPath != null;
assert attributeName != null;
baseReader.checkOpen();
final ICallableWithCleanUp<HDF5EnumerationValueArray> readRunnable =
new ICallableWithCleanUp<HDF5EnumerationValueArray>()
{
@Override
public HDF5EnumerationValueArray call(ICleanUpRegistry registry)
{
final long objectId =
baseReader.h5.openObject(baseReader.fileId, objectPath,
registry);
final long attributeId =
baseReader.h5.openAttribute(objectId, attributeName, registry);
return baseReader.getEnumValueArray(attributeId, objectPath,
attributeName, registry);
}
};
return baseReader.runner.call(readRunnable);
}
public String[] getEnumArrayAttributeAsString(final String objectPath,
final String attributeName) throws HDF5JavaException
{
final HDF5EnumerationValueArray array = getArrayAttr(objectPath, attributeName);
return array.toStringArray();
}
@Override
public HDF5EnumerationValueMDArray getMDArrayAttr(final String objectPath,
final String attributeName) throws HDF5JavaException
{
assert objectPath != null;
assert attributeName != null;
baseReader.checkOpen();
final ICallableWithCleanUp<HDF5EnumerationValueMDArray> readRunnable =
new ICallableWithCleanUp<HDF5EnumerationValueMDArray>()
{
@Override
public HDF5EnumerationValueMDArray call(ICleanUpRegistry registry)
{
final long objectId =
baseReader.h5.openObject(baseReader.fileId, objectPath,
registry);
final long attributeId =
baseReader.h5.openAttribute(objectId, attributeName, registry);
return baseReader.getEnumValueMDArray(attributeId, objectPath,
attributeName, registry);
}
};
return baseReader.runner.call(readRunnable);
}
// /////////////////////
// Data Sets
// /////////////////////
@Override
public String readAsString(final String objectPath) throws HDF5JavaException
{
assert objectPath != null;
baseReader.checkOpen();
final ICallableWithCleanUp<String> writeRunnable = new ICallableWithCleanUp<String>()
{
@Override
public String call(ICleanUpRegistry registry)
{
final long dataSetId =
baseReader.h5.openDataSet(baseReader.fileId, objectPath, registry);
final long storageDataTypeId =
baseReader.h5.getDataTypeForDataSet(dataSetId, registry);
final long nativeDataTypeId =
baseReader.h5.getNativeDataType(storageDataTypeId, registry);
final int size = baseReader.h5.getDataTypeSize(nativeDataTypeId);
final byte[] data = new byte[size];
baseReader.h5.readDataSet(dataSetId, nativeDataTypeId, data);
final String value =
baseReader.h5.getNameForEnumOrCompoundMemberIndex(storageDataTypeId,
EnumerationType.fromStorageForm(data));
if (value == null)
{
throw new HDF5JavaException(objectPath + " needs to be an Enumeration.");
}
return value;
}
};
return baseReader.runner.call(writeRunnable);
}
@Override
public <T extends Enum<T>> T read(String objectPath, Class<T> enumClass)
throws HDF5JavaException
{
final String value = readAsString(objectPath);
try
{
return Enum.valueOf(enumClass, value);
} catch (IllegalArgumentException ex)
{
throw new HDF5JavaException("The Java enum class " + enumClass.getCanonicalName()
+ " has no value '" + value + "'.");
}
}
@Override
public HDF5EnumerationValue read(final String objectPath) throws HDF5JavaException
{
assert objectPath != null;
baseReader.checkOpen();
final ICallableWithCleanUp<HDF5EnumerationValue> readRunnable =
new ICallableWithCleanUp<HDF5EnumerationValue>()
{
@Override
public HDF5EnumerationValue call(ICleanUpRegistry registry)
{
final long dataSetId =
baseReader.h5.openDataSet(baseReader.fileId, objectPath,
registry);
final HDF5EnumerationType enumType =
getEnumTypeForDataSetId(dataSetId, objectPath, false, registry);
return readEnumValue(dataSetId, enumType);
}
};
return baseReader.runner.call(readRunnable);
}
@Override
public HDF5EnumerationValue read(final String objectPath, final HDF5EnumerationType enumType)
throws HDF5JavaException
{
assert objectPath != null;
assert enumType != null;
baseReader.checkOpen();
enumType.check(baseReader.fileId);
final ICallableWithCleanUp<HDF5EnumerationValue> readRunnable =
new ICallableWithCleanUp<HDF5EnumerationValue>()
{
@Override
public HDF5EnumerationValue call(ICleanUpRegistry registry)
{
final long dataSetId =
baseReader.h5.openDataSet(baseReader.fileId, objectPath,
registry);
return readEnumValue(dataSetId, enumType);
}
};
return baseReader.runner.call(readRunnable);
}
private HDF5EnumerationValue readEnumValue(final long dataSetId,
final HDF5EnumerationType enumType)
{
final byte[] data = new byte[enumType.getStorageForm().getStorageSize()];
baseReader.h5.readDataSet(dataSetId, enumType.getNativeTypeId(), data);
return new HDF5EnumerationValue(enumType, EnumerationType.fromStorageForm(data));
}
@Override
public HDF5EnumerationValueArray readArray(final String objectPath,
final HDF5EnumerationType enumTypeOrNull) throws HDF5JavaException
{
assert objectPath != null;
baseReader.checkOpen();
if (enumTypeOrNull != null)
{
enumTypeOrNull.check(baseReader.fileId);
}
final ICallableWithCleanUp<HDF5EnumerationValueArray> readRunnable =
new ICallableWithCleanUp<HDF5EnumerationValueArray>()
{
@Override
public HDF5EnumerationValueArray call(ICleanUpRegistry registry)
{
final long dataSetId =
baseReader.h5.openDataSet(baseReader.fileId, objectPath,
registry);
final long[] dimensions =
baseReader.h5.getDataDimensions(dataSetId, registry);
final boolean scaledEnum = baseReader.isScaledEnum(dataSetId, registry);
final HDF5EnumerationType actualEnumType =
(enumTypeOrNull == null) ? getEnumTypeForDataSetId(dataSetId,
objectPath, scaledEnum, registry) : enumTypeOrNull;
final int arraySize = HDF5Utils.getOneDimensionalArraySize(dimensions);
final EnumStorageForm storageForm = actualEnumType.getStorageForm();
final byte[] data = new byte[arraySize * storageForm.getStorageSize()];
if (scaledEnum)
{
baseReader.h5.readDataSet(dataSetId, actualEnumType
.getStorageForm().getIntNativeTypeId(), data);
} else
{
baseReader.h5.readDataSet(dataSetId,
actualEnumType.getNativeTypeId(), data);
}
return new HDF5EnumerationValueArray(actualEnumType,
EnumerationType.fromStorageForm(data, storageForm));
}
};
return baseReader.runner.call(readRunnable);
}
@Override
public HDF5EnumerationValueArray readArray(final String objectPath) throws HDF5JavaException
{
return readArray(objectPath, (HDF5EnumerationType) null);
}
@Override
public HDF5EnumerationValueArray readArrayBlockWithOffset(final String objectPath,
final HDF5EnumerationType enumTypeOrNull, final int blockSize, final long offset)
{
assert objectPath != null;
baseReader.checkOpen();
if (enumTypeOrNull != null)
{
enumTypeOrNull.check(baseReader.fileId);
}
final ICallableWithCleanUp<HDF5EnumerationValueArray> readRunnable =
new ICallableWithCleanUp<HDF5EnumerationValueArray>()
{
@Override
public HDF5EnumerationValueArray call(ICleanUpRegistry registry)
{
final long dataSetId =
baseReader.h5.openDataSet(baseReader.fileId, objectPath,
registry);
final DataSpaceParameters spaceParams =
baseReader.getSpaceParameters(dataSetId, offset, blockSize,
registry);
final boolean scaledEnum = baseReader.isScaledEnum(dataSetId, registry);
final HDF5EnumerationType actualEnumType =
(enumTypeOrNull == null) ? getEnumTypeForDataSetId(dataSetId,
objectPath, scaledEnum, registry) : enumTypeOrNull;
final byte[] data =
new byte[spaceParams.blockSize
* actualEnumType.getStorageForm().getStorageSize()];
if (scaledEnum)
{
baseReader.h5.readDataSet(dataSetId, actualEnumType
.getStorageForm().getIntNativeTypeId(),
spaceParams.memorySpaceId, spaceParams.dataSpaceId, data);
} else
{
baseReader.h5.readDataSet(dataSetId,
actualEnumType.getNativeTypeId(),
spaceParams.memorySpaceId, spaceParams.dataSpaceId, data);
}
return new HDF5EnumerationValueArray(actualEnumType,
EnumerationType.fromStorageForm(data,
actualEnumType.getStorageForm()));
}
};
return baseReader.runner.call(readRunnable);
}
@Override
public HDF5EnumerationValueArray readArrayBlockWithOffset(final String objectPath,
final int blockSize, final long offset)
{
return readArrayBlockWithOffset(objectPath, (HDF5EnumerationType) null, blockSize, offset);
}
@Override
public HDF5EnumerationValueArray readArrayBlock(final String objectPath, final int blockSize,
final long blockNumber)
{
return readArrayBlockWithOffset(objectPath, (HDF5EnumerationType) null, blockSize,
blockNumber * blockSize);
}
@Override
public HDF5EnumerationValueArray readArrayBlock(final String objectPath,
final HDF5EnumerationType enumType, final int blockSize, final long blockNumber)
{
return readArrayBlockWithOffset(objectPath, enumType, blockSize, blockNumber * blockSize);
}
@Override
public HDF5EnumerationValueMDArray readMDArray(final String objectPath)
throws HDF5JavaException
{
return readMDArray(objectPath, (HDF5EnumerationType) null);
}
@Override
public HDF5EnumerationValueMDArray readMDArray(final String objectPath,
final HDF5EnumerationType enumTypeOrNull) throws HDF5JavaException
{
return readMDArrayBlockWithOffset(objectPath, enumTypeOrNull, null, null);
}
@Override
public HDF5EnumerationValueMDArray readMDArrayBlockWithOffset(final String objectPath,
final HDF5EnumerationType enumTypeOrNull, final int[] blockDimensionsOrNull,
final long[] offsetOrNull)
{
assert objectPath != null;
baseReader.checkOpen();
if (enumTypeOrNull != null)
{
enumTypeOrNull.check(baseReader.fileId);
}
final ICallableWithCleanUp<HDF5EnumerationValueMDArray> writeRunnable =
new ICallableWithCleanUp<HDF5EnumerationValueMDArray>()
{
@Override
public HDF5EnumerationValueMDArray call(final ICleanUpRegistry registry)
{
final long dataSetId =
baseReader.h5.openDataSet(baseReader.fileId, objectPath,
registry);
final boolean scaledEnum = baseReader.isScaledEnum(dataSetId, registry);
final HDF5EnumerationType actualEnumType =
(enumTypeOrNull == null) ? getEnumTypeForDataSetId(dataSetId,
objectPath, scaledEnum, registry) : enumTypeOrNull;
final DataSpaceParameters spaceParams =
baseReader.getSpaceParameters(dataSetId, offsetOrNull,
blockDimensionsOrNull, registry);
final EnumStorageForm storageForm = actualEnumType.getStorageForm();
final byte[] byteArr =
new byte[spaceParams.blockSize * storageForm.getStorageSize()];
if (scaledEnum)
{
baseReader.h5
.readDataSet(dataSetId, storageForm.getIntNativeTypeId(),
spaceParams.memorySpaceId, spaceParams.dataSpaceId,
byteArr);
} else
{
baseReader.h5
.readDataSet(dataSetId, actualEnumType.getNativeTypeId(),
spaceParams.memorySpaceId, spaceParams.dataSpaceId,
byteArr);
}
return new HDF5EnumerationValueMDArray(actualEnumType,
EnumerationType.fromStorageForm(byteArr,
spaceParams.dimensions, storageForm));
}
};
return baseReader.runner.call(writeRunnable);
}
@Override
public HDF5EnumerationValueMDArray readMDArrayBlock(String objectPath,
HDF5EnumerationType type, int[] blockDimensions, long[] blockNumber)
throws HDF5JavaException
{
final long[] offset = new long[blockDimensions.length];
for (int i = 0; i < offset.length; ++i)
{
offset[i] = blockDimensions[i] * blockNumber[i];
}
return readMDArrayBlockWithOffset(objectPath, type, blockDimensions, offset);
}
@Override
public HDF5EnumerationValueMDArray readMDArrayBlock(String objectPath, int[] blockDimensions,
long[] blockNumber) throws HDF5JavaException
{
return readMDArrayBlock(objectPath, null, blockDimensions, blockNumber);
}
@Override
public HDF5EnumerationValueMDArray readMDArrayBlockWithOffset(String objectPath,
int[] blockDimensions, long[] offset) throws HDF5JavaException
{
return readMDArrayBlockWithOffset(objectPath, null, blockDimensions, offset);
}
@Override
public Iterable<HDF5DataBlock<HDF5EnumerationValueArray>> getArrayBlocks(
final String objectPath, final HDF5EnumerationType enumTypeOrNull)
throws HDF5JavaException
{
baseReader.checkOpen();
final HDF5NaturalBlock1DParameters params =
new HDF5NaturalBlock1DParameters(baseReader.getDataSetInformation(objectPath));
return new Iterable<HDF5DataBlock<HDF5EnumerationValueArray>>()
{
@Override
public Iterator<HDF5DataBlock<HDF5EnumerationValueArray>> iterator()
{
return new Iterator<HDF5DataBlock<HDF5EnumerationValueArray>>()
{
final HDF5NaturalBlock1DParameters.HDF5NaturalBlock1DIndex index =
params.getNaturalBlockIndex();
@Override
public boolean hasNext()
{
return index.hasNext();
}
@Override
public HDF5DataBlock<HDF5EnumerationValueArray> next()
{
final long offset = index.computeOffsetAndSizeGetOffset();
final HDF5EnumerationValueArray block =
readArrayBlockWithOffset(objectPath, enumTypeOrNull,
index.getBlockSize(), offset);
return new HDF5DataBlock<HDF5EnumerationValueArray>(block,
index.getAndIncIndex(), offset);
}
@Override
public void remove()
{
throw new UnsupportedOperationException();
}
};
}
};
}
@Override
public Iterable<HDF5DataBlock<HDF5EnumerationValueArray>> getArrayBlocks(final String objectPath)
throws HDF5JavaException
{
return getArrayBlocks(objectPath, (HDF5EnumerationType) null);
}
@Override
public Iterable<HDF5MDEnumBlock> getMDArrayBlocks(final String objectPath,
final HDF5EnumerationType enumTypeOrNull) throws HDF5JavaException
{
final HDF5NaturalBlockMDParameters params =
new HDF5NaturalBlockMDParameters(baseReader.getDataSetInformation(objectPath,
DataTypeInfoOptions.MINIMAL, true));
return new Iterable<HDF5MDEnumBlock>()
{
@Override
public Iterator<HDF5MDEnumBlock> iterator()
{
return new Iterator<HDF5MDEnumBlock>()
{
final HDF5NaturalBlockMDParameters.HDF5NaturalBlockMDIndex index =
params.getNaturalBlockIndex();
@Override
public boolean hasNext()
{
return index.hasNext();
}
@Override
public HDF5MDEnumBlock next()
{
final long[] offset = index.computeOffsetAndSizeGetOffsetClone();
final HDF5EnumerationValueMDArray block =
readMDArrayBlockWithOffset(objectPath, enumTypeOrNull,
index.getBlockSize(), offset);
return new HDF5MDEnumBlock(block, index.getIndexClone(), offset);
}
@Override
public void remove()
{
throw new UnsupportedOperationException();
}
};
}
};
}
@Override
public Iterable<HDF5MDEnumBlock> getMDArrayBlocks(String objectPath) throws HDF5JavaException
{
return getMDArrayBlocks(objectPath, null);
}
}
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