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/*
* Copyright 2007 - 2018 ETH Zuerich, CISD and SIS.
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
package ch.systemsx.cisd.hdf5;
import static hdf.hdf5lib.HDF5Constants.H5T_FLOAT;
/**
* An object representing the storage features that are to be used for a float data set.
* <p>
* The <code>..._KEEP</code> variants denote that the specified storage features should only be
* applied if a new data set has to be created. If the data set already exists, it will be kept with
* whatever storage features it has.
* <em>Note that this may lead to an exception if the existing data set is non-extendable and the
* dimensions of the new data set differ from the dimensions of the existing data set.</em>
* <p>
* The <code>..._DELETE</code> variants denote that the specified storage features should always be
* applied. If the data set already exists, it will be deleted before the new data set is written.
* This is the default behavior. However, if the
* {@link IHDF5WriterConfigurator#keepDataSetsIfTheyExist()} setting is given, the
* <code>..._DELETE</code> variant can be used to override this setting on a case-by-case basis.
* <p>
* The available storage layouts are {@link HDF5StorageLayout#COMPACT},
* {@link HDF5StorageLayout#CONTIGUOUS} or {@link HDF5StorageLayout#CHUNKED} can be chosen. Only
* {@link HDF5StorageLayout#CHUNKED} is extendable and can be compressed.
* <p>
* Two types of compressions are supported: <i>deflation</i> (the method used by <code>gzip</code>)
* and <i>scaling</i>, which can be used if the accuracy of the values are smaller than what the
* atomic data type can store. <b>Note that <i>scaling</i> in general is a lossy compression</b>
* while <i>deflation</i> is always lossless. <i>Scaling</i> compression is only available with HDF5
* 1.8 and newer. Trying to use <i>scaling</i> in strict HDF5 1.6 compatibility mode will throw an
* {@link IllegalStateException}.
* <p>
* For <i>deflation</i> the deflation level can be chosen to get the right balance between speed of
* compression and compression ratio. Often the {@link #DEFAULT_DEFLATION_LEVEL} will be the right
* choice.
* <p>
* For <i>scaling</i>, the scaling factor can be chosen that determines the accuracy of the values
* saved. For float values, the scaling factor determines the number of significant digits of the
* numbers. It is guaranteed that <code>{@literal |f_real - f_saved| < 10^(-scalingFactor)}</code>.
* The algorithm used for scale compression is:
* <ol>
* <li>Calculate the minimum value of all values</li>
* <li>Subtract the minimum value from all values</li>
* <li>Multiply all values obtained in step 2 with <code>{@literal 10^scalingFactor}</code></li>
* <li>Round the values obtained in step 3 to the nearest integer value</li>
* <li>Store the minimum found in step 1 and the values obtained in step 4</li>
* </ol>
* This algorithm is known as GRIB D-scaling.
*
* @author Bernd Rinn
*/
public final class HDF5FloatStorageFeatures extends HDF5AbstractStorageFeatures
{
/**
* Represents 'no compression', use default storage layout.
*/
public static final HDF5FloatStorageFeatures FLOAT_NO_COMPRESSION =
new HDF5FloatStorageFeatures(null, NO_DEFLATION_LEVEL, NO_SCALING_FACTOR);
/**
* Represents 'no compression', use default storage layout.
* <p>
* Keep existing data set and apply only if a new data set has to be created.
*/
public static final HDF5FloatStorageFeatures FLOAT_NO_COMPRESSION_KEEP =
new HDF5FloatStorageFeatures(null, DataSetReplacementPolicy.ENFORCE_KEEP_EXISTING,
NO_DEFLATION_LEVEL, NO_SCALING_FACTOR);
/**
* Represents 'no compression', use default storage layout.
* <p>
* Delete an existing data set before writing the new one. Always apply the chosen settings.
* This allows to overwrite the {@link IHDF5WriterConfigurator#keepDataSetsIfTheyExist()}
* setting.
*/
public static final HDF5FloatStorageFeatures FLOAT_NO_COMPRESSION_DELETE =
new HDF5FloatStorageFeatures(null, DataSetReplacementPolicy.ENFORCE_REPLACE_WITH_NEW,
NO_DEFLATION_LEVEL, NO_SCALING_FACTOR);
/**
* Represents a compact storage layout.
*/
public static final HDF5FloatStorageFeatures FLOAT_COMPACT = new HDF5FloatStorageFeatures(
HDF5StorageLayout.COMPACT, NO_DEFLATION_LEVEL, NO_SCALING_FACTOR);
/**
* Represents a compact storage layout.
* <p>
* Keep existing data set and apply only if a new data set has to be created.
*/
public static final HDF5FloatStorageFeatures FLOAT_COMPACT_KEEP = new HDF5FloatStorageFeatures(
HDF5StorageLayout.COMPACT, DataSetReplacementPolicy.ENFORCE_KEEP_EXISTING,
NO_DEFLATION_LEVEL, NO_SCALING_FACTOR);
/**
* Represents a compact storage layout.
* <p>
* Delete an existing data set before writing the new one. Always apply the chosen settings.
* This allows to overwrite the {@link IHDF5WriterConfigurator#keepDataSetsIfTheyExist()}
* setting.
*/
public static final HDF5FloatStorageFeatures FLOAT_COMPACT_DELETE =
new HDF5FloatStorageFeatures(HDF5StorageLayout.COMPACT,
DataSetReplacementPolicy.ENFORCE_REPLACE_WITH_NEW, NO_DEFLATION_LEVEL,
NO_SCALING_FACTOR);
/**
* Represents a contiguous storage layout.
*/
public static final HDF5FloatStorageFeatures FLOAT_CONTIGUOUS = new HDF5FloatStorageFeatures(
HDF5StorageLayout.CONTIGUOUS, NO_DEFLATION_LEVEL, NO_SCALING_FACTOR);
/**
* Represents a contiguous storage layout.
* <p>
* Keep existing data set and apply only if a new data set has to be created.
*/
public static final HDF5FloatStorageFeatures FLOAT_CONTIGUOUS_KEEP =
new HDF5FloatStorageFeatures(HDF5StorageLayout.CONTIGUOUS,
DataSetReplacementPolicy.ENFORCE_KEEP_EXISTING, NO_DEFLATION_LEVEL,
NO_SCALING_FACTOR);
/**
* Represents a contiguous storage layout.
* <p>
* Delete an existing data set before writing the new one. Always apply the chosen settings.
* This allows to overwrite the {@link IHDF5WriterConfigurator#keepDataSetsIfTheyExist()}
* setting.
*/
public static final HDF5FloatStorageFeatures FLOAT_CONTIGUOUS_DELETE =
new HDF5FloatStorageFeatures(HDF5StorageLayout.CONTIGUOUS,
DataSetReplacementPolicy.ENFORCE_REPLACE_WITH_NEW, NO_DEFLATION_LEVEL,
NO_SCALING_FACTOR);
/**
* Represents a chunked storage layout.
*/
public static final HDF5FloatStorageFeatures FLOAT_CHUNKED = new HDF5FloatStorageFeatures(
HDF5StorageLayout.CHUNKED, NO_DEFLATION_LEVEL, NO_SCALING_FACTOR);
/**
* Represents a chunked storage layout.
* <p>
* Keep existing data set and apply only if a new data set has to be created.
*/
public static final HDF5FloatStorageFeatures FLOAT_CHUNKED_KEEP = new HDF5FloatStorageFeatures(
HDF5StorageLayout.CHUNKED, DataSetReplacementPolicy.ENFORCE_KEEP_EXISTING,
NO_DEFLATION_LEVEL, NO_SCALING_FACTOR);
/**
* Represents a chunked storage layout.
* <p>
* Delete an existing data set before writing the new one. Always apply the chosen settings.
* This allows to overwrite the {@link IHDF5WriterConfigurator#keepDataSetsIfTheyExist()}
* setting.
*/
public static final HDF5FloatStorageFeatures FLOAT_CHUNKED_DELETE =
new HDF5FloatStorageFeatures(HDF5StorageLayout.CHUNKED,
DataSetReplacementPolicy.ENFORCE_REPLACE_WITH_NEW, NO_DEFLATION_LEVEL,
NO_SCALING_FACTOR);
/**
* Represents 'standard compression', that is deflation with the default deflation level.
*/
public static final HDF5FloatStorageFeatures FLOAT_DEFLATE = new HDF5FloatStorageFeatures(null,
DEFAULT_DEFLATION_LEVEL, NO_SCALING_FACTOR);
/**
* Represents 'standard compression' with a pre-filter shuffle, that is deflation with the
* default deflation level.
*/
public static final HDF5FloatStorageFeatures FLOAT_SHUFFLE_DEFLATE =
new HDF5FloatStorageFeatures(null, DataSetReplacementPolicy.USE_WRITER_DEFAULT, true,
DEFAULT_DEFLATION_LEVEL, NO_SCALING_FACTOR);
/**
* Represents 'standard compression', that is deflation with the default deflation level.
* <p>
* Keep existing data set and apply only if a new data set has to be created.
*/
public static final HDF5FloatStorageFeatures FLOAT_DEFLATE_KEEP = new HDF5FloatStorageFeatures(
null, DataSetReplacementPolicy.ENFORCE_KEEP_EXISTING, DEFAULT_DEFLATION_LEVEL,
NO_SCALING_FACTOR);
/**
* Represents 'standard compression', that is deflation with the default deflation level.
* <p>
* Delete an existing data set before writing the new one. Always apply the chosen settings.
* This allows to overwrite the {@link IHDF5WriterConfigurator#keepDataSetsIfTheyExist()}
* setting.
*/
public static final HDF5FloatStorageFeatures FLOAT_DEFLATE_DELETE =
new HDF5FloatStorageFeatures(null, DataSetReplacementPolicy.ENFORCE_REPLACE_WITH_NEW,
DEFAULT_DEFLATION_LEVEL, NO_SCALING_FACTOR);
/**
* Represents 'maximal compression', that is deflation with the maximal deflation level.
*/
public static final HDF5FloatStorageFeatures FLOAT_DEFLATE_MAX = new HDF5FloatStorageFeatures(
null, MAX_DEFLATION_LEVEL, NO_SCALING_FACTOR);
/**
* Represents 'maximal compression', that is deflation with the maximal deflation level.
* <p>
* Keep existing data set and apply only if a new data set has to be created.
*/
public static final HDF5FloatStorageFeatures FLOAT_DEFLATE_MAX_KEEP =
new HDF5FloatStorageFeatures(null, DataSetReplacementPolicy.ENFORCE_KEEP_EXISTING,
MAX_DEFLATION_LEVEL, NO_SCALING_FACTOR);
/**
* Represents 'maximal compression', that is deflation with the maximal deflation level.
* <p>
* Delete an existing data set before writing the new one. Always apply the chosen settings.
* This allows to overwrite the {@link IHDF5WriterConfigurator#keepDataSetsIfTheyExist()}
* setting.
*/
public static final HDF5FloatStorageFeatures FLOAT_DEFLATE_MAX_DELETE =
new HDF5FloatStorageFeatures(null, DataSetReplacementPolicy.ENFORCE_REPLACE_WITH_NEW,
MAX_DEFLATION_LEVEL, NO_SCALING_FACTOR);
/**
* Represents scaling with scaling factor 1 for float values.
*/
public static final HDF5FloatStorageFeatures FLOAT_SCALING1 = new HDF5FloatStorageFeatures(
null, NO_DEFLATION_LEVEL, (byte) 1);
/**
* Represents scaling with scaling factor 1 for float values.
* <p>
* Keep existing data set and apply only if a new data set has to be created.
*/
public static final HDF5FloatStorageFeatures FLOAT_SCALING1_KEEP =
new HDF5FloatStorageFeatures(null, DataSetReplacementPolicy.ENFORCE_KEEP_EXISTING,
NO_DEFLATION_LEVEL, (byte) 1);
/**
* Represents scaling with scaling factor 1 for float values.
* <p>
* Delete an existing data set before writing the new one. Always apply the chosen settings.
* This allows to overwrite the {@link IHDF5WriterConfigurator#keepDataSetsIfTheyExist()}
* setting.
*/
public static final HDF5FloatStorageFeatures FLOAT_SCALING1_DELETE =
new HDF5FloatStorageFeatures(null, DataSetReplacementPolicy.ENFORCE_REPLACE_WITH_NEW,
NO_DEFLATION_LEVEL, (byte) 1);
/**
* Represents scaling with scaling factor 1 for float values combined with deflation using the
* default deflation level.
*/
public static final HDF5FloatStorageFeatures FLOAT_SCALING1_DEFLATE =
new HDF5FloatStorageFeatures(null, DEFAULT_DEFLATION_LEVEL, (byte) 1);
/**
* Represents scaling with scaling factor 1 for float values combined with deflation using the
* default deflation level.
* <p>
* Keep existing data set and apply only if a new data set has to be created.
*/
public static final HDF5FloatStorageFeatures FLOAT_SCALING1_DEFLATE_KEEP =
new HDF5FloatStorageFeatures(null, DataSetReplacementPolicy.ENFORCE_KEEP_EXISTING,
DEFAULT_DEFLATION_LEVEL, (byte) 1);
/**
* Represents scaling with scaling factor 1 for float values combined with deflation using the
* default deflation level.
* <p>
* Delete an existing data set before writing the new one. Always apply the chosen settings.
* This allows to overwrite the {@link IHDF5WriterConfigurator#keepDataSetsIfTheyExist()}
* setting.
*/
public static final HDF5FloatStorageFeatures FLOAT_SCALING1_DEFLATE_DELETE =
new HDF5FloatStorageFeatures(null, DataSetReplacementPolicy.ENFORCE_REPLACE_WITH_NEW,
DEFAULT_DEFLATION_LEVEL, (byte) 1);
/**
* Represents scaling with scaling factor 2 for float values.
*/
public static final HDF5FloatStorageFeatures FLOAT_SCALING2 = new HDF5FloatStorageFeatures(
null, NO_DEFLATION_LEVEL, (byte) 2);
/**
* Represents scaling with scaling factor 2 for float values.
* <p>
* Keep existing data set and apply only if a new data set has to be created.
*/
public static final HDF5FloatStorageFeatures FLOAT_SCALING2_KEEP =
new HDF5FloatStorageFeatures(null, DataSetReplacementPolicy.ENFORCE_KEEP_EXISTING,
NO_DEFLATION_LEVEL, (byte) 2);
/**
* Represents scaling with scaling factor 2 for float values.
* <p>
* Delete an existing data set before writing the new one. Always apply the chosen settings.
* This allows to overwrite the {@link IHDF5WriterConfigurator#keepDataSetsIfTheyExist()}
* setting.
*/
public static final HDF5FloatStorageFeatures FLOAT_SCALING2_DELETE =
new HDF5FloatStorageFeatures(null, DataSetReplacementPolicy.ENFORCE_REPLACE_WITH_NEW,
NO_DEFLATION_LEVEL, (byte) 2);
/**
* Represents scaling with scaling factor 2 for float values combined with deflation using the
* default deflation level.
*/
public static final HDF5FloatStorageFeatures FLOAT_SCALING2_DEFLATE =
new HDF5FloatStorageFeatures(null, DEFAULT_DEFLATION_LEVEL, (byte) 2);
/**
* Represents scaling with scaling factor 2 for float values combined with deflation using the
* default deflation level.
* <p>
* Keep existing data set and apply only if a new data set has to be created.
*/
public static final HDF5FloatStorageFeatures FLOAT_SCALING2_DEFLATE_KEEP =
new HDF5FloatStorageFeatures(null, DataSetReplacementPolicy.ENFORCE_KEEP_EXISTING,
DEFAULT_DEFLATION_LEVEL, (byte) 2);
/**
* Represents scaling with scaling factor 2 for float values combined with deflation using the
* default deflation level.
* <p>
* Delete an existing data set before writing the new one. Always apply the chosen settings.
* This allows to overwrite the {@link IHDF5WriterConfigurator#keepDataSetsIfTheyExist()}
* setting.
*/
public static final HDF5FloatStorageFeatures FLOAT_SCALING2_DEFLATE_DELETE =
new HDF5FloatStorageFeatures(null, DataSetReplacementPolicy.ENFORCE_REPLACE_WITH_NEW,
DEFAULT_DEFLATION_LEVEL, (byte) 2);
/**
* Represents scaling with scaling factor 3 for float values.
*/
public static final HDF5FloatStorageFeatures FLOAT_SCALING3 = new HDF5FloatStorageFeatures(
null, NO_DEFLATION_LEVEL, (byte) 3);
/**
* Represents scaling with scaling factor 3 for float values.
* <p>
* Keep existing data set and apply only if a new data set has to be created.
*/
public static final HDF5FloatStorageFeatures FLOAT_SCALING3_KEEP =
new HDF5FloatStorageFeatures(null, DataSetReplacementPolicy.ENFORCE_KEEP_EXISTING,
NO_DEFLATION_LEVEL, (byte) 3);
/**
* Represents scaling with scaling factor 3 for float values.
* <p>
* Delete an existing data set before writing the new one. Always apply the chosen settings.
* This allows to overwrite the {@link IHDF5WriterConfigurator#keepDataSetsIfTheyExist()}
* setting.
*/
public static final HDF5FloatStorageFeatures FLOAT_SCALING3_DELETE =
new HDF5FloatStorageFeatures(null, DataSetReplacementPolicy.ENFORCE_REPLACE_WITH_NEW,
true, NO_DEFLATION_LEVEL, (byte) 3);
/**
* Represents scaling with scaling factor 3 for float values combined with deflation using the
* default deflation level.
*/
public static final HDF5FloatStorageFeatures FLOAT_SCALING3_DEFLATE =
new HDF5FloatStorageFeatures(null, DEFAULT_DEFLATION_LEVEL, (byte) 3);
/**
* Represents scaling with scaling factor 3 for float values combined with deflation using the
* default deflation level.
* <p>
* Keep existing data set and apply only if a new data set has to be created.
*/
public static final HDF5FloatStorageFeatures FLOAT_SCALING3_DEFLATE_KEEP =
new HDF5FloatStorageFeatures(null, DataSetReplacementPolicy.ENFORCE_KEEP_EXISTING,
DEFAULT_DEFLATION_LEVEL, (byte) 3);
/**
* Represents scaling with scaling factor 3 for float values combined with deflation using the
* default deflation level.
* <p>
* Delete an existing data set before writing the new one. Always apply the chosen settings.
* This allows to overwrite the {@link IHDF5WriterConfigurator#keepDataSetsIfTheyExist()}
* setting.
*/
public static final HDF5FloatStorageFeatures FLOAT_SCALING3_DEFLATE_DELETE =
new HDF5FloatStorageFeatures(null, DataSetReplacementPolicy.ENFORCE_REPLACE_WITH_NEW,
DEFAULT_DEFLATION_LEVEL, (byte) 3);
/**
* A builder for storage features.
*/
public static final class HDF5FloatStorageFeatureBuilder extends
HDF5AbstractStorageFeatureBuilder
{
public HDF5FloatStorageFeatureBuilder()
{
}
public HDF5FloatStorageFeatureBuilder(HDF5AbstractStorageFeatures template)
{
super(template);
}
/**
* Compresses the dataset with default deflation level, if <code>compress==true</code>, do
* not compress if <code>compress==false</code>.
*
* @return This builder.
*/
@Override
public HDF5FloatStorageFeatureBuilder compress(boolean compress)
{
super.compress(compress);
return this;
}
/**
* Compress the dataset with default deflation level.
*
* @return This builder.
*/
@Override
public HDF5FloatStorageFeatureBuilder compress()
{
super.compress();
return this;
}
/**
* Compresses this dataset with the given <var>deflateLevel</var>.
* {@link #NO_DEFLATION_LEVEL} means: do not compress. A good default value is
* {@link #DEFAULT_DEFLATION_LEVEL}, the maximum value supported is
* {@link #MAX_DEFLATION_LEVEL}.
*
* @return This builder.
*/
@Override
public HDF5FloatStorageFeatureBuilder deflateLevel(byte deflateLevel)
{
super.deflateLevel(deflateLevel);
return this;
}
/**
* Sets the scaling factor for an integer scaling pre-filter.
*
* @return This builder.
*/
@Override
public HDF5FloatStorageFeatureBuilder scalingFactor(byte scalingFactor)
{
super.scalingFactor(scalingFactor);
return this;
}
/**
* Disables the scaling pre-filter.
*
* @return This builder.
*/
@Override
public HDF5FloatStorageFeatureBuilder noScaling()
{
super.noScaling();
return this;
}
/**
* Sets a shuffling pre-filter for deflation if <code>shuffleBeforeDeflate==true</code> and
* disables it if <code>shuffleBeforeDeflate==false</code>. Theshuffling pre-filter may
* improve the compression level but may also increase the compression time.
* <p>
* Only takes effect if compression is switched on.
*
* @return This builder.
*/
@Override
public HDF5FloatStorageFeatureBuilder shuffleBeforeDeflate(boolean shuffleBeforeDeflate)
{
super.shuffleBeforeDeflate(shuffleBeforeDeflate);
return this;
}
/**
* Sets a shuffling pre-filter for deflation. This may improve the compression level but may
* also increase the compression time.
* <p>
* Only takes effect if compression is switched on.
*
* @see #compress()
* @see #deflateLevel(byte)
* @return This builder.
*/
@Override
public HDF5AbstractStorageFeatureBuilder shuffleBeforeDeflate()
{
super.shuffleBeforeDeflate();
return this;
}
/**
* Set the layout for the dataset.
*
* @return This builder.
*/
@Override
public HDF5FloatStorageFeatureBuilder storageLayout(HDF5StorageLayout proposedLayout)
{
super.storageLayout(proposedLayout);
return this;
}
/**
* Set a compact layout for the dataset.
*
* @return This builder.
*/
@Override
public HDF5AbstractStorageFeatureBuilder compactStorageLayout()
{
super.compactStorageLayout();
return this;
}
/**
* Set a contiguous layout for the dataset.
*
* @return This builder.
*/
@Override
public HDF5AbstractStorageFeatureBuilder contiguousStorageLayout()
{
super.contiguousStorageLayout();
return this;
}
/**
* Set a chunked layout for the dataset.
*
* @return This builder.
*/
@Override
public HDF5AbstractStorageFeatureBuilder chunkedStorageLayout()
{
super.chunkedStorageLayout();
return this;
}
/**
* Let a heuristic choose the right layout for the dataset.
*
* @return This builder.
*/
@Override
public HDF5AbstractStorageFeatureBuilder defaultStorageLayout()
{
this.defaultStorageLayout();
return this;
}
/**
* Set the dataset replacement policy for existing datasets.
*
* @return This builder.
*/
@Override
public HDF5FloatStorageFeatureBuilder datasetReplacementPolicy(
DataSetReplacementPolicy datasetReplacementPolicy)
{
super.datasetReplacementPolicy(datasetReplacementPolicy);
return this;
}
/**
* Set the dataset replacement policy for existing datasets to
* {@link ch.systemsx.cisd.hdf5.HDF5AbstractStorageFeatures.DataSetReplacementPolicy#USE_WRITER_DEFAULT}
* .
*
* @return This builder.
*/
@Override
public HDF5FloatStorageFeatureBuilder datasetReplacementUseWriterDefault()
{
super.datasetReplacementUseWriterDefault();
return this;
}
/**
* Set the dataset replacement policy for existing datasets to
* {@link ch.systemsx.cisd.hdf5.HDF5AbstractStorageFeatures.DataSetReplacementPolicy#ENFORCE_KEEP_EXISTING}
* .
*
* @return This builder.
*/
@Override
public HDF5FloatStorageFeatureBuilder datasetReplacementEnforceKeepExisting()
{
super.datasetReplacementEnforceKeepExisting();
return this;
}
/**
* Set the dataset replacement policy for existing datasets to
* {@link ch.systemsx.cisd.hdf5.HDF5AbstractStorageFeatures.DataSetReplacementPolicy#ENFORCE_REPLACE_WITH_NEW}
* .
*
* @return This builder.
*/
@Override
public HDF5FloatStorageFeatureBuilder datasetReplacementEnforceReplaceWithNew()
{
super.datasetReplacementEnforceReplaceWithNew();
return this;
}
/**
* Returns the storage features corresponding to this builder's values.
*/
@Override
public HDF5FloatStorageFeatures features()
{
return new HDF5FloatStorageFeatures(this);
}
}
/**
* Returns a new storage feature builder.
*/
public static HDF5FloatStorageFeatureBuilder build()
{
return new HDF5FloatStorageFeatureBuilder();
}
/**
* Returns a new storage feature builder, initializing from <var>template</var>.
*/
public static HDF5FloatStorageFeatureBuilder build(HDF5AbstractStorageFeatures template)
{
return new HDF5FloatStorageFeatureBuilder(template);
}
/**
* Create a corresponding {@link HDF5FloatStorageFeatures} for the given
* {@link HDF5GenericStorageFeatures}.
*/
public static HDF5FloatStorageFeatures createFromGeneric(
HDF5GenericStorageFeatures storageFeatures)
{
if (storageFeatures == HDF5GenericStorageFeatures.GENERIC_CHUNKED)
{
return HDF5FloatStorageFeatures.FLOAT_CHUNKED;
} else if (storageFeatures == HDF5GenericStorageFeatures.GENERIC_CHUNKED_DELETE)
{
return HDF5FloatStorageFeatures.FLOAT_CHUNKED_DELETE;
} else if (storageFeatures == HDF5GenericStorageFeatures.GENERIC_CHUNKED_KEEP)
{
return HDF5FloatStorageFeatures.FLOAT_CHUNKED_KEEP;
} else if (storageFeatures == HDF5GenericStorageFeatures.GENERIC_COMPACT)
{
return HDF5FloatStorageFeatures.FLOAT_COMPACT;
} else if (storageFeatures == HDF5GenericStorageFeatures.GENERIC_COMPACT_DELETE)
{
return HDF5FloatStorageFeatures.FLOAT_COMPACT_DELETE;
} else if (storageFeatures == HDF5GenericStorageFeatures.GENERIC_COMPACT_KEEP)
{
return HDF5FloatStorageFeatures.FLOAT_COMPACT_KEEP;
} else if (storageFeatures == HDF5GenericStorageFeatures.GENERIC_CONTIGUOUS)
{
return HDF5FloatStorageFeatures.FLOAT_CONTIGUOUS;
} else if (storageFeatures == HDF5GenericStorageFeatures.GENERIC_CONTIGUOUS_DELETE)
{
return HDF5FloatStorageFeatures.FLOAT_CONTIGUOUS_DELETE;
} else if (storageFeatures == HDF5GenericStorageFeatures.GENERIC_CONTIGUOUS_KEEP)
{
return HDF5FloatStorageFeatures.FLOAT_CONTIGUOUS_KEEP;
} else if (storageFeatures == HDF5GenericStorageFeatures.GENERIC_NO_COMPRESSION)
{
return HDF5FloatStorageFeatures.FLOAT_NO_COMPRESSION;
} else if (storageFeatures == HDF5GenericStorageFeatures.GENERIC_NO_COMPRESSION_DELETE)
{
return HDF5FloatStorageFeatures.FLOAT_NO_COMPRESSION_DELETE;
} else if (storageFeatures == HDF5GenericStorageFeatures.GENERIC_NO_COMPRESSION_KEEP)
{
return HDF5FloatStorageFeatures.FLOAT_NO_COMPRESSION_KEEP;
} else if (storageFeatures == HDF5GenericStorageFeatures.GENERIC_DEFLATE)
{
return HDF5FloatStorageFeatures.FLOAT_DEFLATE;
} else if (storageFeatures == HDF5GenericStorageFeatures.GENERIC_DEFLATE_DELETE)
{
return HDF5FloatStorageFeatures.FLOAT_DEFLATE_DELETE;
} else if (storageFeatures == HDF5GenericStorageFeatures.GENERIC_DEFLATE_KEEP)
{
return HDF5FloatStorageFeatures.FLOAT_DEFLATE_KEEP;
} else if (storageFeatures == HDF5GenericStorageFeatures.GENERIC_DEFLATE_MAX)
{
return HDF5FloatStorageFeatures.FLOAT_DEFLATE_MAX;
} else if (storageFeatures == HDF5GenericStorageFeatures.GENERIC_DEFLATE_MAX_DELETE)
{
return HDF5FloatStorageFeatures.FLOAT_DEFLATE_MAX_DELETE;
} else if (storageFeatures == HDF5GenericStorageFeatures.GENERIC_DEFLATE_MAX_KEEP)
{
return HDF5FloatStorageFeatures.FLOAT_DEFLATE_MAX_KEEP;
} else
{
return new HDF5FloatStorageFeatures(storageFeatures.tryGetProposedLayout(),
storageFeatures.getDatasetReplacementPolicy(),
storageFeatures.getDeflateLevel(), NO_SCALING_FACTOR);
}
}
/**
* Creates a {@link HDF5FloatStorageFeatures} object that represents deflation with the given
* <var>deflationLevel</var>.
*/
public static HDF5FloatStorageFeatures createDeflation(int deflationLevel)
{
return createDeflation(deflationLevel, DataSetReplacementPolicy.USE_WRITER_DEFAULT);
}
/**
* Creates a {@link HDF5FloatStorageFeatures} object that represents deflation with the given
* <var>deflationLevel</var>.
* <p>
* Keep existing data set and apply only if a new data set has to be created.
*/
public static HDF5FloatStorageFeatures createDeflationKeep(int deflationLevel)
{
return createDeflation(deflationLevel, DataSetReplacementPolicy.ENFORCE_KEEP_EXISTING);
}
/**
* Creates a {@link HDF5FloatStorageFeatures} object that represents deflation with the given
* <var>deflationLevel</var>.
* <p>
* Delete an existing data set before writing the new one. Always apply the chosen settings.
* This allows to overwrite the {@link IHDF5WriterConfigurator#keepDataSetsIfTheyExist()}
* setting.
*/
public static HDF5FloatStorageFeatures createDeflationDelete(int deflationLevel)
{
return createDeflation(deflationLevel, DataSetReplacementPolicy.ENFORCE_REPLACE_WITH_NEW);
}
/**
* Creates a {@link HDF5FloatStorageFeatures} object that represents deflation with the given
* <var>deflationLevel</var>.
*/
private static HDF5FloatStorageFeatures createDeflation(int deflationLevel,
DataSetReplacementPolicy dataSetReplacementPolicy)
{
return new HDF5FloatStorageFeatures(null, dataSetReplacementPolicy, toByte(deflationLevel),
NO_SCALING_FACTOR);
}
/**
* Creates a {@link HDF5FloatStorageFeatures} object that represents float scaling with the
* given <var>scalingFactor</var>.
*/
public static HDF5FloatStorageFeatures createFloatScaling(int scalingFactor)
{
return new HDF5FloatStorageFeatures(null, NO_DEFLATION_LEVEL, toByte(scalingFactor));
}
/**
* Creates a {@link HDF5FloatStorageFeatures} object that represents float scaling with the
* given <var>scalingFactor</var>.
* <p>
* Keep existing data set and apply only if a new data set has to be created.
*/
public static HDF5FloatStorageFeatures createFloatScalingKeep(int scalingFactor)
{
return new HDF5FloatStorageFeatures(null, DataSetReplacementPolicy.ENFORCE_KEEP_EXISTING,
NO_DEFLATION_LEVEL, toByte(scalingFactor));
}
/**
* Creates a {@link HDF5FloatStorageFeatures} object that represents deflation with the default
* deflation level and float scaling with the given <var>scalingFactor</var>.
*/
public static HDF5FloatStorageFeatures createDeflateAndFloatScaling(int scalingFactor)
{
return new HDF5FloatStorageFeatures(null, DEFAULT_DEFLATION_LEVEL, toByte(scalingFactor));
}
/**
* Creates a {@link HDF5FloatStorageFeatures} object that represents deflation with the default
* deflation level and float scaling with the given <var>scalingFactor</var>.
* <p>
* Keep existing data set and apply only if a new data set has to be created.
*/
public static HDF5FloatStorageFeatures createDeflateAndFloatScalingKeep(int scalingFactor)
{
return new HDF5FloatStorageFeatures(null, DataSetReplacementPolicy.ENFORCE_KEEP_EXISTING,
DEFAULT_DEFLATION_LEVEL, toByte(scalingFactor));
}
/**
* Creates a {@link HDF5FloatStorageFeatures} object that represents deflation with the given
* <var>deflateLevel</var> and float scaling with the given <var>scalingFactor</var>.
*/
public static HDF5FloatStorageFeatures createDeflateAndFloatScaling(int deflateLevel,
int scalingFactor)
{
return new HDF5FloatStorageFeatures(null, toByte(deflateLevel), toByte(scalingFactor));
}
/**
* Creates a {@link HDF5FloatStorageFeatures} object that represents deflation with the given
* <var>deflateLevel</var> and float scaling with the given <var>scalingFactor</var>.
* <p>
* Keep existing data set and apply only if a new data set has to be created.
*/
public static HDF5FloatStorageFeatures createDeflateAndFloatScalingKeep(int deflateLevel,
int scalingFactor)
{
return new HDF5FloatStorageFeatures(null, DataSetReplacementPolicy.ENFORCE_KEEP_EXISTING,
toByte(deflateLevel), toByte(scalingFactor));
}
HDF5FloatStorageFeatures(HDF5StorageLayout proposedLayoutOrNull, byte deflateLevel,
byte scalingFactor)
{
this(proposedLayoutOrNull, DataSetReplacementPolicy.USE_WRITER_DEFAULT, deflateLevel,
scalingFactor);
}
HDF5FloatStorageFeatures(HDF5StorageLayout proposedLayoutOrNull,
DataSetReplacementPolicy dataSetReplacementPolicy, byte deflateLevel, byte scalingFactor)
{
super(proposedLayoutOrNull, dataSetReplacementPolicy, deflateLevel, scalingFactor);
}
HDF5FloatStorageFeatures(HDF5FloatStorageFeatureBuilder builder)
{
super(builder.getStorageLayout(), builder.getDatasetReplacementPolicy(), builder
.isShuffleBeforeDeflate(), builder.getDeflateLevel(), builder.getScalingFactor());
}
HDF5FloatStorageFeatures(HDF5StorageLayout proposedLayoutOrNull,
DataSetReplacementPolicy dataSetReplacementPolicy, boolean shuffleBeforeDeflate,
byte deflateLevel, byte scalingFactor)
{
super(proposedLayoutOrNull, dataSetReplacementPolicy, shuffleBeforeDeflate, deflateLevel,
scalingFactor);
}
/**
* Returns true, if this compression setting can be applied on the given <var>dataClassId</var>.
*/
@Override
boolean isCompatibleWithDataClass(int dataClassId)
{
return (dataClassId == H5T_FLOAT);
}
}
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