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/*
* Copyright 2007 - 2018 ETH Zuerich, CISD and SIS.
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
package ch.systemsx.cisd.hdf5;
import static hdf.hdf5lib.H5.H5Tinsert;
import java.lang.reflect.Field;
import ch.systemsx.cisd.hdf5.cleanup.ICleanUpRegistry;
import ch.systemsx.cisd.hdf5.hdf5lib.HDFHelper;
/**
* A class that byteifies member fields of objects.
*
* @author Bernd Rinn
*/
abstract class HDF5MemberByteifyer
{
private final Field fieldOrNull;
private final String memberName;
protected final int maxCharacters;
protected final int size;
protected final int offsetOnDisk;
protected final int offsetInMemory;
protected final CharacterEncoding encoding;
private final HDF5DataTypeVariant typeVariant;
private final boolean isVariableLengthType;
HDF5MemberByteifyer(Field fieldOrNull, String memberName, int size, int offset, int memOffset,
boolean isVariableLengthType, HDF5DataTypeVariant typeVariantOrNull)
{
this(fieldOrNull, memberName, size, offset, memOffset, CharacterEncoding.ASCII, size,
isVariableLengthType, false, typeVariantOrNull);
}
HDF5MemberByteifyer(Field fieldOrNull, String memberName, int size, int offset, int memOffset,
CharacterEncoding encoding, int maxCharacters, boolean isVariableLengthType,
boolean isReferenceType)
{
this(fieldOrNull, memberName, size, offset, memOffset, encoding, maxCharacters,
isVariableLengthType, isReferenceType, HDF5DataTypeVariant.NONE);
}
private HDF5MemberByteifyer(Field fieldOrNull, String memberName, int size, int offset,
int memOffset, CharacterEncoding encoding, int maxCharacters,
boolean isVariableLengthType, boolean isReferenceType,
HDF5DataTypeVariant typeVariantOrNull)
{
this.isVariableLengthType = isVariableLengthType;
this.fieldOrNull = fieldOrNull;
this.memberName = memberName;
this.maxCharacters = maxCharacters;
if (isVariableLengthType)
{
this.size = HDFHelper.getMachineWordSize();
} else if (isReferenceType)
{
this.size = HDF5BaseReader.REFERENCE_SIZE_IN_BYTES;
} else
{
this.size = size;
}
this.offsetOnDisk = offset;
this.offsetInMemory = PaddingUtils.padOffset(memOffset, getElementSize());
this.encoding = encoding;
this.typeVariant = HDF5DataTypeVariant.maskNull(typeVariantOrNull);
}
/**
* Returns the size of one element of this data type in bytes.
*/
abstract int getElementSize();
abstract byte[] byteify(long compoundDataTypeId, Object obj) throws IllegalAccessException;
abstract void setFromByteArray(long compoundDataTypeId, Object obj, byte[] byteArr,
int arrayOffset) throws IllegalAccessException;
abstract long getMemberStorageTypeId();
/**
* Returns -1 if the native type id should be inferred from the storage type id
*/
abstract long getMemberNativeTypeId();
HDF5EnumerationType tryGetEnumType()
{
return null;
}
void insertType(long dataTypeId)
{
H5Tinsert(dataTypeId, memberName, offsetOnDisk, getMemberStorageTypeId());
}
void insertNativeType(long dataTypeId, HDF5 h5, ICleanUpRegistry registry)
{
if (getMemberNativeTypeId() < 0)
{
H5Tinsert(dataTypeId, memberName, offsetInMemory,
h5.getNativeDataType(getMemberStorageTypeId(), registry));
} else
{
H5Tinsert(dataTypeId, memberName, offsetInMemory, getMemberNativeTypeId());
}
}
String getMemberName()
{
return memberName;
}
Field tryGetField()
{
return fieldOrNull;
}
int getMaxCharacters()
{
return maxCharacters;
}
int getSize()
{
return size;
}
int getOffsetOnDisk()
{
return offsetOnDisk;
}
int getTotalSizeOnDisk()
{
return offsetOnDisk + size;
}
int getOffsetInMemory()
{
return offsetInMemory;
}
int getTotalSizeInMemory()
{
return offsetInMemory + size;
}
HDF5DataTypeVariant getTypeVariant()
{
return typeVariant;
}
boolean isVariableLengthType()
{
return isVariableLengthType;
}
String describe()
{
if (fieldOrNull != null)
{
return "field '" + fieldOrNull.getName() + "' of class '"
+ fieldOrNull.getDeclaringClass().getCanonicalName() + "'";
} else
{
return "member '" + memberName + "'";
}
}
boolean isDummy()
{
return false;
}
boolean mayBeCut()
{
return false;
}
@Override
public String toString()
{
return describe();
}
}
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